RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 SMIM27A0A1W2PRY6 76 aa9.06□□□□□ -0.96
ARHGEF1-220ENST00000600274 OR4C46A6NHA9 309 aa9.06□□□□□ -0.96
ARHGEF1-220ENST00000600274 J3KRW8 73 aa9.06□□□□□ -0.96
ARHGEF1-220ENST00000600274 EFNA4P52798 201 aa9.06□□□□□ -0.96
ARHGEF1-220ENST00000600274 C15orf32Q32M92 178 aa9.06□□□□□ -0.96
ARHGEF1-220ENST00000600274 C16orf54Q6UWD8 224 aa9.06□□□□□ -0.96
ARHGEF1-220ENST00000600274 CLEC19AQ6UXS0 136 aa9.06□□□□□ -0.96
ARHGEF1-220ENST00000600274 FANCD2OSQ96PS1 177 aa9.06□□□□□ -0.96
ARHGEF1-220ENST00000600274 AAMDCQ9H7C9 122 aa9.06□□□□□ -0.96
ARHGEF1-220ENST00000600274 VWC2LB2RUY7 222 aa9.06□□□□□ -0.96
ARHGEF1-220ENST00000600274 LINC00614P0C842 121 aa9.06□□□□□ -0.96
ARHGEF1-220ENST00000600274 TSPOP30536 169 aa9.06□□□□□ -0.96
ARHGEF1-220ENST00000600274 ZNF562Q6V9R5 426 aa9.06□□□□□ -0.96
ARHGEF1-220ENST00000600274 THYN1Q9P016 225 aa9.06□□□□□ -0.96
ARHGEF1-220ENST00000600274 TRAV40A0A0B4J280 105 aa9.06□□□□□ -0.96
ARHGEF1-220ENST00000600274 ZNF785A8K8V0 405 aa9.06□□□□□ -0.96
ARHGEF1-220ENST00000600274 A8MWL6 223 aa9.06□□□□□ -0.96
ARHGEF1-220ENST00000600274 ATP6V0E1O15342 81 aa9.06□□□□□ -0.96
ARHGEF1-220ENST00000600274 CLEC3BP05452 202 aa9.06□□□□□ -0.96
ARHGEF1-220ENST00000600274 WFDC12Q8WWY7 111 aa9.06□□□□□ -0.96
ARHGEF1-220ENST00000600274 RHOGP84095 191 aa9.05□□□□□ -0.96
ARHGEF1-220ENST00000600274 LINC00173Q6ZV60 143 aa9.05□□□□□ -0.96
ARHGEF1-220ENST00000600274 Q86TA4 180 aa9.05□□□□□ -0.96
ARHGEF1-220ENST00000600274 WFDC3Q8IUB2 231 aa9.05□□□□□ -0.96
ARHGEF1-220ENST00000600274 C18orf32Q8TCD1 76 aa9.05□□□□□ -0.96
ARHGEF1-220ENST00000600274 C8orf49Q96NF6 230 aa9.05□□□□□ -0.96
ARHGEF1-220ENST00000600274 K7EQM0 130 aa9.05□□□□□ -0.96
ARHGEF1-220ENST00000600274 LEPROTL1O95214 131 aa9.05□□□□□ -0.96
ARHGEF1-220ENST00000600274 CT45A10P0DMU9 189 aa9.05□□□□□ -0.96
ARHGEF1-220ENST00000600274 IGLL1P15814 213 aa9.05□□□□□ -0.96
ARHGEF1-220ENST00000600274 NIT1Q86X76 327 aa9.05□□□□□ -0.96
ARHGEF1-220ENST00000600274 MAPK1IP1LQ8NDC0 245 aa9.05□□□□□ -0.96
ARHGEF1-220ENST00000600274 OR8A1Q8NGG7 326 aa9.05□□□□□ -0.96
ARHGEF1-220ENST00000600274 FMC1Q96HJ9 113 aa9.05□□□□□ -0.96
ARHGEF1-220ENST00000600274 SHANK2-AS3Q9BTD1 123 aa9.05□□□□□ -0.96
ARHGEF1-220ENST00000600274 OTORQ9NRC9 128 aa9.05□□□□□ -0.96
ARHGEF1-220ENST00000600274 ANKRD17O75179 2603 aaKnown RBP9.05□□□□□ -0.96
ARHGEF1-220ENST00000600274 SORL1Q92673 2214 aa9.05□□□□□ -0.96
ARHGEF1-220ENST00000600274 IGHV7-81A0A0B4J1V7 117 aa9.05□□□□□ -0.96
ARHGEF1-220ENST00000600274 A1L4Q6 167 aa9.05□□□□□ -0.96
ARHGEF1-220ENST00000600274 CSN1S1P47710 185 aa9.05□□□□□ -0.96
ARHGEF1-220ENST00000600274 GTSF1Q8WW33 167 aa9.05□□□□□ -0.96
ARHGEF1-220ENST00000600274 RAB37Q96AX2 223 aa9.05□□□□□ -0.96
ARHGEF1-220ENST00000600274 TRBV19A0A075B6N1 114 aa9.04□□□□□ -0.96
ARHGEF1-220ENST00000600274 ODF3BA8MYP8 253 aa9.04□□□□□ -0.96
ARHGEF1-220ENST00000600274 PRB1P04280 392 aa9.04□□□□□ -0.96
ARHGEF1-220ENST00000600274 RBX1P62877 108 aa9.04□□□□□ -0.96
ARHGEF1-220ENST00000600274 PSG8Q9UQ74 426 aa9.04□□□□□ -0.96
ARHGEF1-220ENST00000600274 TRAV9-1A0A075B6T8 112 aa9.04□□□□□ -0.96
ARHGEF1-220ENST00000600274 TOMM40O96008 361 aa9.04□□□□□ -0.96
ARHGEF1-220ENST00000600274 ATP5J2P56134 94 aa9.04□□□□□ -0.96
ARHGEF1-220ENST00000600274 HBBP68871 147 aa9.04□□□□□ -0.96
ARHGEF1-220ENST00000600274 LCNL1Q6ZST4 164 aa9.04□□□□□ -0.96
ARHGEF1-220ENST00000600274 SMIM15Q7Z3B0 74 aa9.04□□□□□ -0.96
ARHGEF1-220ENST00000600274 DTX2Q86UW9 622 aa9.04□□□□□ -0.96
ARHGEF1-220ENST00000600274 PIP4P2Q8N4L2 257 aa9.04□□□□□ -0.96
ARHGEF1-220ENST00000600274 RNF5Q99942 180 aa9.04□□□□□ -0.96
ARHGEF1-220ENST00000600274 NOTCH2Q04721 2471 aa9.04□□□□□ -0.96
ARHGEF1-220ENST00000600274 CUBNO60494 3623 aa9.04□□□□□ -0.96
ARHGEF1-220ENST00000600274 TRBV9A0A0B4J1U6 114 aa9.03□□□□□ -0.96
ARHGEF1-220ENST00000600274 IGHV2-70DA0A0C4DH43 119 aa9.03□□□□□ -0.96
ARHGEF1-220ENST00000600274 Q0VG73 95 aa9.03□□□□□ -0.96
ARHGEF1-220ENST00000600274 TM4SF20Q53R12 229 aa9.03□□□□□ -0.96
ARHGEF1-220ENST00000600274 EBLN2Q6P2I7 272 aa9.03□□□□□ -0.96
ARHGEF1-220ENST00000600274 RNF182Q8N6D2 247 aa9.03□□□□□ -0.96
ARHGEF1-220ENST00000600274 C1RLQ9NZP8 487 aa9.03□□□□□ -0.96
ARHGEF1-220ENST00000600274 MRPL27Q9P0M9 148 aaKnown RBP9.03□□□□□ -0.96
ARHGEF1-220ENST00000600274 A0A087X0K7 114 aa9.03□□□□□ -0.96
ARHGEF1-220ENST00000600274 FAM181BA6NEQ2 426 aa9.03□□□□□ -0.96
ARHGEF1-220ENST00000600274 IGHV3-11P01762 117 aa9.03□□□□□ -0.96
ARHGEF1-220ENST00000600274 IGHV4-39P01824 125 aa9.03□□□□□ -0.96
ARHGEF1-220ENST00000600274 MYCNOSP40205 109 aa9.03□□□□□ -0.96
ARHGEF1-220ENST00000600274 RPL11P62913 178 aaKnown RBP9.03□□□□□ -0.96
ARHGEF1-220ENST00000600274 PVRIGQ6DKI7 326 aa9.03□□□□□ -0.96
ARHGEF1-220ENST00000600274 PRSS3P2Q8NHM4 247 aa9.03□□□□□ -0.96
ARHGEF1-220ENST00000600274 IGLV11-55A0A075B6I3 123 aa9.03□□□□□ -0.96
ARHGEF1-220ENST00000600274 TMEM238LA0A1B0GVL6 79 aa9.03□□□□□ -0.96
ARHGEF1-220ENST00000600274 H3BRN7 92 aa9.03□□□□□ -0.96
ARHGEF1-220ENST00000600274 PAX1P15863 534 aa9.03□□□□□ -0.96
ARHGEF1-220ENST00000600274 Q8N9W7 124 aa9.03□□□□□ -0.96
ARHGEF1-220ENST00000600274 CCL19Q99731 98 aa9.03□□□□□ -0.96
ARHGEF1-220ENST00000600274 TMEM70Q9BUB7 260 aa9.03□□□□□ -0.96
ARHGEF1-220ENST00000600274 TRAV9-2A0A087WT02 112 aa9.02□□□□□ -0.96
ARHGEF1-220ENST00000600274 NDUFA3O95167 84 aa9.02□□□□□ -0.96
ARHGEF1-220ENST00000600274 ARMS2P0C7Q2 107 aa9.02□□□□□ -0.96
ARHGEF1-220ENST00000600274 PPIFP30405 207 aaKnown RBP9.02□□□□□ -0.96
ARHGEF1-220ENST00000600274 MEGF9Q9H1U4 602 aa9.02□□□□□ -0.96
ARHGEF1-220ENST00000600274 RABAC1Q9UI14 185 aa9.02□□□□□ -0.96
ARHGEF1-220ENST00000600274 IGHV4-61A0A0C4DH41 118 aa9.02□□□□□ -0.97
ARHGEF1-220ENST00000600274 NPIPB5A8MRT5 1133 aa9.02□□□□□ -0.97
ARHGEF1-220ENST00000600274 AMMECR1LQ6DCA0 310 aa9.02□□□□□ -0.97
ARHGEF1-220ENST00000600274 TMEM75Q8N9X5 138 aa9.02□□□□□ -0.97
ARHGEF1-220ENST00000600274 NPBQ8NG41 125 aa9.02□□□□□ -0.97
ARHGEF1-220ENST00000600274 SIRPDQ9H106 197 aa9.02□□□□□ -0.97
ARHGEF1-220ENST00000600274 NPFFO15130 113 aa9.02□□□□□ -0.97
ARHGEF1-220ENST00000600274 LTAP01374 205 aa9.02□□□□□ -0.97
ARHGEF1-220ENST00000600274 LMO4P61968 165 aa9.02□□□□□ -0.97
ARHGEF1-220ENST00000600274 RPL24P83731 157 aaKnown RBP9.02□□□□□ -0.97
ARHGEF1-220ENST00000600274 SIGLEC15Q6ZMC9 328 aa9.02□□□□□ -0.97
ARHGEF1-220ENST00000600274 SAP30O75446 220 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms