RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 BCAP31P51572 246 aa11.97□□□□□ -0.49
SMG9-210ENST00000600097 RAB32Q13637 225 aa11.97□□□□□ -0.49
SMG9-210ENST00000600097 SPATA12Q7Z6I5 190 aa11.97□□□□□ -0.49
SMG9-210ENST00000600097 RNASE8Q8TDE3 154 aaKnown RBP11.97□□□□□ -0.49
SMG9-210ENST00000600097 GNPNAT1Q96EK6 184 aaPredicted RBP11.97□□□□□ -0.49
SMG9-210ENST00000600097 ZNF503Q96F45 646 aa11.97□□□□□ -0.49
SMG9-210ENST00000600097 NOP10Q9NPE3 64 aaKnown RBP11.97□□□□□ -0.49
SMG9-210ENST00000600097 PMS2P5A8MQ11 134 aa11.96□□□□□ -0.49
SMG9-210ENST00000600097 FNDC10F2Z333 226 aa11.96□□□□□ -0.49
SMG9-210ENST00000600097 H7BYZ3 331 aa11.96□□□□□ -0.49
SMG9-210ENST00000600097 SIX6O95475 246 aa11.96□□□□□ -0.49
SMG9-210ENST00000600097 LINC00869P0C866 280 aa11.96□□□□□ -0.49
SMG9-210ENST00000600097 CAV2P51636 162 aa11.96□□□□□ -0.49
SMG9-210ENST00000600097 DLK1P80370 383 aa11.96□□□□□ -0.49
SMG9-210ENST00000600097 RPUSD4Q96CM3 377 aaKnown RBP11.96□□□□□ -0.49
SMG9-210ENST00000600097 UHRF2Q96PU4 802 aa11.96□□□□□ -0.49
SMG9-210ENST00000600097 C20orf144Q9BQM9 153 aa11.96□□□□□ -0.49
SMG9-210ENST00000600097 MGAT4CQ9UBM8 478 aa11.96□□□□□ -0.49
SMG9-210ENST00000600097 ALG5Q9Y673 324 aa11.96□□□□□ -0.49
SMG9-210ENST00000600097 M6PRP20645 277 aa11.95□□□□□ -0.5
SMG9-210ENST00000600097 OR5I1Q13606 314 aa11.95□□□□□ -0.5
SMG9-210ENST00000600097 RXFP4Q8TDU9 374 aa11.95□□□□□ -0.5
SMG9-210ENST00000600097 GGACTQ9BVM4 153 aa11.95□□□□□ -0.5
SMG9-210ENST00000600097 Q9H3A6 140 aa11.95□□□□□ -0.5
SMG9-210ENST00000600097 NPVFQ9HCQ7 196 aa11.95□□□□□ -0.5
SMG9-210ENST00000600097 SCRT2Q9NQ03 307 aa11.95□□□□□ -0.5
SMG9-210ENST00000600097 LYRM2Q9NU23 88 aaPredicted RBP11.95□□□□□ -0.5
SMG9-210ENST00000600097 TRAV26-1A0A087WT03 109 aa11.94□□□□□ -0.5
SMG9-210ENST00000600097 A0A1W2PPQ1 181 aa11.94□□□□□ -0.5
SMG9-210ENST00000600097 PET100P0DJ07 73 aa11.94□□□□□ -0.5
SMG9-210ENST00000600097 CXCL2P19875 107 aa11.94□□□□□ -0.5
SMG9-210ENST00000600097 BTF3P20290 206 aaKnown RBP11.94□□□□□ -0.5
SMG9-210ENST00000600097 H2BFSP57053 126 aa11.94□□□□□ -0.5
SMG9-210ENST00000600097 STX12Q86Y82 276 aa11.94□□□□□ -0.5
SMG9-210ENST00000600097 CCDC28AQ8IWP9 274 aa11.94□□□□□ -0.5
SMG9-210ENST00000600097 UPK3BQ9BT76 320 aa11.94□□□□□ -0.5
SMG9-210ENST00000600097 E5RGE8 158 aa11.93□□□□□ -0.5
SMG9-210ENST00000600097 RRAS2P62070 204 aaPredicted RBP11.93□□□□□ -0.5
SMG9-210ENST00000600097 HBG1P69891 147 aa11.93□□□□□ -0.5
SMG9-210ENST00000600097 HBG2P69892 147 aa11.93□□□□□ -0.5
SMG9-210ENST00000600097 LCN15Q6UWW0 184 aa11.93□□□□□ -0.5
SMG9-210ENST00000600097 LINC00612Q8N6U2 182 aa11.93□□□□□ -0.5
SMG9-210ENST00000600097 SLC50A1Q9BRV3 221 aa11.93□□□□□ -0.5
SMG9-210ENST00000600097 ARL6Q9H0F7 186 aa11.93□□□□□ -0.5
SMG9-210ENST00000600097 MED28Q9H204 178 aa11.93□□□□□ -0.5
SMG9-210ENST00000600097 C11orf1Q9H5F2 150 aa11.93□□□□□ -0.5
SMG9-210ENST00000600097 LRP1BQ9NZR2 4599 aa11.93□□□□□ -0.5
SMG9-210ENST00000600097 FAM24AA6NFZ4 105 aa11.92□□□□□ -0.5
SMG9-210ENST00000600097 H3BNG1 76 aa11.92□□□□□ -0.5
SMG9-210ENST00000600097 CCNKO75909 580 aa11.92□□□□□ -0.5
SMG9-210ENST00000600097 SULT1A1P50225 295 aa11.92□□□□□ -0.5
SMG9-210ENST00000600097 LRRC37A5PQ49AS3 106 aa11.92□□□□□ -0.5
SMG9-210ENST00000600097 PXDC1Q5TGL8 231 aa11.92□□□□□ -0.5
SMG9-210ENST00000600097 TEPPQ6URK8 271 aa11.92□□□□□ -0.5
SMG9-210ENST00000600097 KRTAP1-5Q9BYS1 174 aa11.92□□□□□ -0.5
SMG9-210ENST00000600097 SLC25A31Q9H0C2 315 aa11.92□□□□□ -0.5
SMG9-210ENST00000600097 ARV1Q9H2C2 271 aa11.92□□□□□ -0.5
SMG9-210ENST00000600097 ZNF331Q9NQX6 463 aaPredicted RBP11.92□□□□□ -0.5
SMG9-210ENST00000600097 MRPS12O15235 138 aaKnown RBP11.91□□□□□ -0.5
SMG9-210ENST00000600097 S100A11P31949 105 aa11.91□□□□□ -0.5
SMG9-210ENST00000600097 SLC38A11Q08AI6 406 aa11.91□□□□□ -0.5
SMG9-210ENST00000600097 PATE2Q6UY27 113 aa11.91□□□□□ -0.5
SMG9-210ENST00000600097 TMEM252Q8N6L7 170 aa11.91□□□□□ -0.5
SMG9-210ENST00000600097 PPP1R1CQ8WVI7 109 aa11.91□□□□□ -0.5
SMG9-210ENST00000600097 A0A0J9YY99 117 aa11.9□□□□□ -0.5
SMG9-210ENST00000600097 SNURFLB1AK76 121 aa11.9□□□□□ -0.5
SMG9-210ENST00000600097 CST7O76096 145 aa11.9□□□□□ -0.5
SMG9-210ENST00000600097 ATP6V1FQ16864 119 aa11.9□□□□□ -0.5
SMG9-210ENST00000600097 ESRGQ1W209 222 aa11.9□□□□□ -0.5
SMG9-210ENST00000600097 MRPS16Q9Y3D3 137 aaKnown RBP11.9□□□□□ -0.5
SMG9-210ENST00000600097 GAGE12BA1L429 117 aa11.89□□□□□ -0.51
SMG9-210ENST00000600097 GAGE7O76087 117 aa11.89□□□□□ -0.51
SMG9-210ENST00000600097 MPC2O95563 127 aa11.89□□□□□ -0.51
SMG9-210ENST00000600097 GAGE12FP0CL80 117 aa11.89□□□□□ -0.51
SMG9-210ENST00000600097 GAGE12GP0CL81 117 aa11.89□□□□□ -0.51
SMG9-210ENST00000600097 GAGE12IP0CL82 117 aa11.89□□□□□ -0.51
SMG9-210ENST00000600097 HOXA5P20719 270 aa11.89□□□□□ -0.51
SMG9-210ENST00000600097 KRTAP10-2P60368 255 aa11.89□□□□□ -0.51
SMG9-210ENST00000600097 ARL16Q0P5N6 197 aa11.89□□□□□ -0.51
SMG9-210ENST00000600097 RAB31Q13636 194 aa11.89□□□□□ -0.51
SMG9-210ENST00000600097 GFI1BQ5VTD9 330 aa11.89□□□□□ -0.51
SMG9-210ENST00000600097 LINC00305Q7Z4B0 112 aa11.89□□□□□ -0.51
SMG9-210ENST00000600097 ZNF546Q86UE3 836 aa11.89□□□□□ -0.51
SMG9-210ENST00000600097 BPIFA4PQ86YQ2 179 aa11.89□□□□□ -0.51
SMG9-210ENST00000600097 IGSF23A1L1A6 192 aa11.88□□□□□ -0.51
SMG9-210ENST00000600097 PRB4P10163 310 aaPredicted RBP11.88□□□□□ -0.51
SMG9-210ENST00000600097 KIR3DS1Q14943 382 aa11.88□□□□□ -0.51
SMG9-210ENST00000600097 ASB13Q8WXK3 278 aa11.88□□□□□ -0.51
SMG9-210ENST00000600097 UQCC1Q9NVA1 299 aa11.88□□□□□ -0.51
SMG9-210ENST00000600097 OR5AC2Q9NZP5 309 aa11.88□□□□□ -0.51
SMG9-210ENST00000600097 BAXQ07812 192 aa11.87□□□□□ -0.51
SMG9-210ENST00000600097 THAP6Q8TBB0 222 aa11.87□□□□□ -0.51
SMG9-210ENST00000600097 PARD6GQ9BYG4 376 aaPredicted RBP11.87□□□□□ -0.51
SMG9-210ENST00000600097 ZNF586Q9NXT0 402 aa11.87□□□□□ -0.51
SMG9-210ENST00000600097 PXMP4Q9Y6I8 212 aa11.87□□□□□ -0.51
SMG9-210ENST00000600097 H0YIZ8 118 aa11.86□□□□□ -0.51
SMG9-210ENST00000600097 NHLH2Q02577 135 aa11.86□□□□□ -0.51
SMG9-210ENST00000600097 DAZ2Q13117 558 aaKnown RBP11.86□□□□□ -0.51
SMG9-210ENST00000600097 VWC2Q2TAL6 325 aa11.86□□□□□ -0.51
SMG9-210ENST00000600097 ODF3Q96PU9 254 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms