RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 ZNF331Q9NQX6 463 aaPredicted RBP11.75□□□□□ -0.53
VRK3-218ENST00000600031 FAM181BA6NEQ2 426 aa11.74□□□□□ -0.53
VRK3-218ENST00000600031 TOMM40O96008 361 aa11.74□□□□□ -0.53
VRK3-218ENST00000600031 TCL1AP56279 114 aa11.74□□□□□ -0.53
VRK3-218ENST00000600031 LYZP61626 148 aa11.74□□□□□ -0.53
VRK3-218ENST00000600031 CLEC19AQ6UXS0 136 aa11.74□□□□□ -0.53
VRK3-218ENST00000600031 STXBP6Q8NFX7 210 aa11.74□□□□□ -0.53
VRK3-218ENST00000600031 KCNS1Q96KK3 526 aa11.74□□□□□ -0.53
VRK3-218ENST00000600031 VAMP8Q9BV40 100 aa11.74□□□□□ -0.53
VRK3-218ENST00000600031 TRBV7-1A0A0A6YYK4 115 aa11.74□□□□□ -0.53
VRK3-218ENST00000600031 PEX7O00628 323 aa11.74□□□□□ -0.53
VRK3-218ENST00000600031 ZNF253O75346 499 aa11.74□□□□□ -0.53
VRK3-218ENST00000600031 HYPMO75409 117 aa11.74□□□□□ -0.53
VRK3-218ENST00000600031 Q8N2B8 174 aa11.74□□□□□ -0.53
VRK3-218ENST00000600031 GRAMD2BQ96HH9 432 aa11.74□□□□□ -0.53
VRK3-218ENST00000600031 BMPR1BO00238 502 aa11.73□□□□□ -0.53
VRK3-218ENST00000600031 IGHG4P01861 327 aa11.73□□□□□ -0.53
VRK3-218ENST00000600031 APCSP02743 223 aa11.73□□□□□ -0.53
VRK3-218ENST00000600031 FOSL1P15407 271 aa11.73□□□□□ -0.53
VRK3-218ENST00000600031 CD33P20138 364 aa11.73□□□□□ -0.53
VRK3-218ENST00000600031 RAB9AP51151 201 aa11.73□□□□□ -0.53
VRK3-218ENST00000600031 SCGB2A2Q13296 93 aa11.73□□□□□ -0.53
VRK3-218ENST00000600031 MRPL54Q6P161 138 aaKnown RBP11.73□□□□□ -0.53
VRK3-218ENST00000600031 ZNF705AQ6ZN79 300 aaPredicted RBP11.73□□□□□ -0.53
VRK3-218ENST00000600031 LINC00305Q7Z4B0 112 aa11.73□□□□□ -0.53
VRK3-218ENST00000600031 ZNF491Q8N8L2 437 aa11.73□□□□□ -0.53
VRK3-218ENST00000600031 ZNF414Q96IQ9 312 aa11.73□□□□□ -0.53
VRK3-218ENST00000600031 NEU1Q99519 415 aa11.73□□□□□ -0.53
VRK3-218ENST00000600031 PYYP10082 97 aa11.72□□□□□ -0.53
VRK3-218ENST00000600031 PSMB8P28062 276 aa11.72□□□□□ -0.53
VRK3-218ENST00000600031 SLC35B1P78383 322 aa11.72□□□□□ -0.53
VRK3-218ENST00000600031 FXYD5Q96DB9 178 aa11.72□□□□□ -0.53
VRK3-218ENST00000600031 SMIM12Q96EX1 92 aa11.72□□□□□ -0.53
VRK3-218ENST00000600031 IGHV3-35A0A0C4DH35 117 aa11.72□□□□□ -0.53
VRK3-218ENST00000600031 WI2-2373I1.2A0A1W2PRP0 233 aa11.72□□□□□ -0.53
VRK3-218ENST00000600031 IL4P05112 153 aa11.72□□□□□ -0.53
VRK3-218ENST00000600031 SRIP30626 198 aa11.72□□□□□ -0.53
VRK3-218ENST00000600031 AMTP48728 403 aa11.72□□□□□ -0.53
VRK3-218ENST00000600031 KIAA1644Q3SXP7 199 aa11.72□□□□□ -0.53
VRK3-218ENST00000600031 OR4B1Q8NGF8 309 aa11.72□□□□□ -0.53
VRK3-218ENST00000600031 USMG5Q96IX5 58 aa11.72□□□□□ -0.53
VRK3-218ENST00000600031 NRN1Q9NPD7 142 aa11.72□□□□□ -0.53
VRK3-218ENST00000600031 A0A1W2PS18 150 aa11.71□□□□□ -0.53
VRK3-218ENST00000600031 INAFM1C9JVW0 142 aa11.71□□□□□ -0.53
VRK3-218ENST00000600031 IGHV3-11P01762 117 aa11.71□□□□□ -0.53
VRK3-218ENST00000600031 MYCNOSP40205 109 aa11.71□□□□□ -0.53
VRK3-218ENST00000600031 RNF125Q96EQ8 232 aa11.71□□□□□ -0.53
VRK3-218ENST00000600031 MRPL27Q9P0M9 148 aaKnown RBP11.71□□□□□ -0.53
VRK3-218ENST00000600031 ZNF324O75467 553 aaPredicted RBP11.71□□□□□ -0.54
VRK3-218ENST00000600031 Q6ZSV7 163 aa11.71□□□□□ -0.54
VRK3-218ENST00000600031 LINC00479Q96M42 142 aa11.71□□□□□ -0.54
VRK3-218ENST00000600031 HIGD1AQ9Y241 93 aa11.71□□□□□ -0.54
VRK3-218ENST00000600031 NF1P21359 2839 aa11.7□□□□□ -0.54
VRK3-218ENST00000600031 DIRC3C9JPN6 131 aa11.7□□□□□ -0.54
VRK3-218ENST00000600031 SCGB2A1O75556 95 aa11.7□□□□□ -0.54
VRK3-218ENST00000600031 TRBV12-3P01733 135 aa11.7□□□□□ -0.54
VRK3-218ENST00000600031 HIST1H1EP10412 219 aaKnown RBP11.7□□□□□ -0.54
VRK3-218ENST00000600031 KRTDAPP60985 99 aa11.7□□□□□ -0.54
VRK3-218ENST00000600031 TDRG1Q3Y452 100 aa11.7□□□□□ -0.54
VRK3-218ENST00000600031 NHLRC2Q8NBF2 726 aa11.7□□□□□ -0.54
VRK3-218ENST00000600031 NUDT10Q8NFP7 164 aa11.7□□□□□ -0.54
VRK3-218ENST00000600031 ZNF418Q8TF45 676 aaPredicted RBP11.7□□□□□ -0.54
VRK3-218ENST00000600031 NUDT11Q96G61 164 aa11.7□□□□□ -0.54
VRK3-218ENST00000600031 PAM16Q9Y3D7 125 aa11.7□□□□□ -0.54
VRK3-218ENST00000600031 UBE2G1P62253 170 aa11.69□□□□□ -0.54
VRK3-218ENST00000600031 LEMD1Q68G75 181 aa11.69□□□□□ -0.54
VRK3-218ENST00000600031 ATP6V0BQ99437 205 aa11.69□□□□□ -0.54
VRK3-218ENST00000600031 SLC25A39Q9BZJ4 359 aaPredicted RBP11.69□□□□□ -0.54
VRK3-218ENST00000600031 EPDR1Q9UM22 224 aa11.69□□□□□ -0.54
VRK3-218ENST00000600031 A0A0G2JLM5 398 aa11.69□□□□□ -0.54
VRK3-218ENST00000600031 RNASE1P07998 156 aaKnown RBP11.69□□□□□ -0.54
VRK3-218ENST00000600031 HILS1P60008 231 aa11.69□□□□□ -0.54
VRK3-218ENST00000600031 Q8N976 141 aa11.69□□□□□ -0.54
VRK3-218ENST00000600031 TSKUQ8WUA8 353 aa11.69□□□□□ -0.54
VRK3-218ENST00000600031 RCHY1Q96PM5 261 aa11.69□□□□□ -0.54
VRK3-218ENST00000600031 SETXQ7Z333 2677 aaKnown RBP11.68□□□□□ -0.54
VRK3-218ENST00000600031 IGHV3OR16-8A0A075B7F1 116 aa11.68□□□□□ -0.54
VRK3-218ENST00000600031 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.68□□□□□ -0.54
VRK3-218ENST00000600031 TMEM89A2RUT3 159 aa11.68□□□□□ -0.54
VRK3-218ENST00000600031 CYSRT1A8MQ03 144 aa11.68□□□□□ -0.54
VRK3-218ENST00000600031 CA1P00915 261 aaPredicted RBP11.68□□□□□ -0.54
VRK3-218ENST00000600031 PMCHP20382 165 aa11.68□□□□□ -0.54
VRK3-218ENST00000600031 ATP5L2Q7Z4Y8 100 aa11.68□□□□□ -0.54
VRK3-218ENST00000600031 NUP35Q8NFH5 326 aa11.68□□□□□ -0.54
VRK3-218ENST00000600031 OR4X2Q8NGF9 303 aa11.68□□□□□ -0.54
VRK3-218ENST00000600031 ATG101Q9BSB4 218 aa11.68□□□□□ -0.54
VRK3-218ENST00000600031 KLF12Q9Y4X4 402 aa11.68□□□□□ -0.54
VRK3-218ENST00000600031 TRAV34A0A0B4J273 112 aa11.68□□□□□ -0.54
VRK3-218ENST00000600031 SLC25A5P05141 298 aaKnown RBP11.68□□□□□ -0.54
VRK3-218ENST00000600031 RPLP1P05386 114 aaKnown RBP11.68□□□□□ -0.54
VRK3-218ENST00000600031 KLF5Q13887 457 aaPredicted RBP11.68□□□□□ -0.54
VRK3-218ENST00000600031 NSD1Q96L73 2696 aaPredicted RBP11.67□□□□□ -0.54
VRK3-218ENST00000600031 PGPA6NDG6 321 aa11.67□□□□□ -0.54
VRK3-218ENST00000600031 ARL3P36405 182 aa11.67□□□□□ -0.54
VRK3-218ENST00000600031 SLAQ13239 276 aa11.67□□□□□ -0.54
VRK3-218ENST00000600031 FOXE3Q13461 319 aa11.67□□□□□ -0.54
VRK3-218ENST00000600031 C18orf32Q8TCD1 76 aa11.67□□□□□ -0.54
VRK3-218ENST00000600031 BORCS7Q96B45 105 aa11.67□□□□□ -0.54
VRK3-218ENST00000600031 GPR82Q96P67 336 aa11.67□□□□□ -0.54
VRK3-218ENST00000600031 SHANK2-AS3Q9BTD1 123 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms