RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 DAD1P61803 113 aa10.45□□□□□ -0.74
XRCC1-208ENST00000598422 TMEM256Q8N2U0 113 aa10.45□□□□□ -0.74
XRCC1-208ENST00000598422 LINC01587Q99440 93 aa10.45□□□□□ -0.74
XRCC1-208ENST00000598422 H0YIZ8 118 aa10.44□□□□□ -0.74
XRCC1-208ENST00000598422 TMEM14CQ9P0S9 112 aa10.44□□□□□ -0.74
XRCC1-208ENST00000598422 TIMM9Q9Y5J7 89 aa10.44□□□□□ -0.74
XRCC1-208ENST00000598422 C17orf112F2Z3M2 114 aa10.43□□□□□ -0.74
XRCC1-208ENST00000598422 ZNF253O75346 499 aa10.43□□□□□ -0.74
XRCC1-208ENST00000598422 HTN1P15515 57 aa10.43□□□□□ -0.74
XRCC1-208ENST00000598422 TAS2R60P59551 318 aa10.43□□□□□ -0.74
XRCC1-208ENST00000598422 GCSAMLQ5JQS6 135 aa10.43□□□□□ -0.74
XRCC1-208ENST00000598422 SAT2Q96F10 170 aaPredicted RBP10.43□□□□□ -0.74
XRCC1-208ENST00000598422 ATP5SQ99766 215 aa10.43□□□□□ -0.74
XRCC1-208ENST00000598422 WDR61Q9GZS3 305 aaKnown RBP10.43□□□□□ -0.74
XRCC1-208ENST00000598422 ZNF586Q9NXT0 402 aa10.43□□□□□ -0.74
XRCC1-208ENST00000598422 EPPK1P58107 5090 aaKnown RBP10.43□□□□□ -0.74
XRCC1-208ENST00000598422 TRBV19A0A075B6N1 114 aa10.42□□□□□ -0.74
XRCC1-208ENST00000598422 LYRM9A8MSI8 78 aa10.42□□□□□ -0.74
XRCC1-208ENST00000598422 PRAC2D3DTV9 90 aa10.42□□□□□ -0.74
XRCC1-208ENST00000598422 MPC2O95563 127 aa10.42□□□□□ -0.74
XRCC1-208ENST00000598422 P0DMU3 169 aa10.42□□□□□ -0.74
XRCC1-208ENST00000598422 FAM231AP0DMU4 169 aa10.42□□□□□ -0.74
XRCC1-208ENST00000598422 FAM231CP0DMU5 169 aa10.42□□□□□ -0.74
XRCC1-208ENST00000598422 HIST1H1EP10412 219 aaKnown RBP10.42□□□□□ -0.74
XRCC1-208ENST00000598422 OXA1LQ15070 435 aa10.42□□□□□ -0.74
XRCC1-208ENST00000598422 BLNKQ8WV28 456 aa10.42□□□□□ -0.74
XRCC1-208ENST00000598422 MRPL53Q96EL3 112 aaKnown RBP10.42□□□□□ -0.74
XRCC1-208ENST00000598422 FAM210BQ96KR6 192 aa10.42□□□□□ -0.74
XRCC1-208ENST00000598422 AAMDCQ9H7C9 122 aa10.42□□□□□ -0.74
XRCC1-208ENST00000598422 PLA2G2EQ9NZK7 142 aa10.42□□□□□ -0.74
XRCC1-208ENST00000598422 H7BYZ3 331 aa10.41□□□□□ -0.74
XRCC1-208ENST00000598422 IFNA5P01569 189 aa10.41□□□□□ -0.74
XRCC1-208ENST00000598422 PRM2P04554 102 aa10.41□□□□□ -0.74
XRCC1-208ENST00000598422 DEFB130BP0DP73 79 aa10.41□□□□□ -0.74
XRCC1-208ENST00000598422 DEFB130AP0DP74 79 aa10.41□□□□□ -0.74
XRCC1-208ENST00000598422 PYYP10082 97 aa10.41□□□□□ -0.74
XRCC1-208ENST00000598422 LEPP41159 167 aa10.41□□□□□ -0.74
XRCC1-208ENST00000598422 PDE6HQ13956 83 aa10.41□□□□□ -0.74
XRCC1-208ENST00000598422 SCGB1C1Q8TD33 95 aa10.41□□□□□ -0.74
XRCC1-208ENST00000598422 C16orf74Q96GX8 76 aa10.41□□□□□ -0.74
XRCC1-208ENST00000598422 C20orf144Q9BQM9 153 aa10.41□□□□□ -0.74
XRCC1-208ENST00000598422 MRPL32Q9BYC8 188 aaKnown RBP10.41□□□□□ -0.74
XRCC1-208ENST00000598422 MBD2Q9UBB5 411 aa10.41□□□□□ -0.74
XRCC1-208ENST00000598422 PRELID1Q9Y255 219 aa10.41□□□□□ -0.74
XRCC1-208ENST00000598422 HSPB11Q9Y547 144 aa10.41□□□□□ -0.74
XRCC1-208ENST00000598422 J3KRW8 73 aa10.4□□□□□ -0.74
XRCC1-208ENST00000598422 M0R3E3 92 aa10.4□□□□□ -0.74
XRCC1-208ENST00000598422 RPL12P30050 165 aaKnown RBP10.4□□□□□ -0.74
XRCC1-208ENST00000598422 MIR17HGQ75NE6 70 aa10.4□□□□□ -0.74
XRCC1-208ENST00000598422 CCDC28AQ8IWP9 274 aa10.4□□□□□ -0.74
XRCC1-208ENST00000598422 ODF3Q96PU9 254 aa10.4□□□□□ -0.74
XRCC1-208ENST00000598422 SLC25A2Q9BXI2 301 aa10.4□□□□□ -0.74
XRCC1-208ENST00000598422 PARD6GQ9BYG4 376 aaPredicted RBP10.4□□□□□ -0.74
XRCC1-208ENST00000598422 SMIM3Q9BZL3 60 aa10.4□□□□□ -0.74
XRCC1-208ENST00000598422 NPIPB6E9PJ23 425 aa10.39□□□□□ -0.75
XRCC1-208ENST00000598422 PTTG1O95997 202 aa10.39□□□□□ -0.75
XRCC1-208ENST00000598422 AZU1P20160 251 aa10.39□□□□□ -0.75
XRCC1-208ENST00000598422 GFI1BQ5VTD9 330 aa10.39□□□□□ -0.75
XRCC1-208ENST00000598422 UBE2DNLQ8IWF7 75 aa10.39□□□□□ -0.75
XRCC1-208ENST00000598422 OR51M1Q9H341 326 aa10.39□□□□□ -0.75
XRCC1-208ENST00000598422 ALG5Q9Y673 324 aa10.39□□□□□ -0.75
XRCC1-208ENST00000598422 BIRC6Q9NR09 4857 aa10.39□□□□□ -0.75
XRCC1-208ENST00000598422 OR7C2O60412 319 aa10.38□□□□□ -0.75
XRCC1-208ENST00000598422 NDUFB4O95168 129 aa10.38□□□□□ -0.75
XRCC1-208ENST00000598422 CT45A10P0DMU9 189 aa10.38□□□□□ -0.75
XRCC1-208ENST00000598422 FFAR4Q5NUL3 377 aa10.38□□□□□ -0.75
XRCC1-208ENST00000598422 TMEM88Q6PEY1 159 aa10.38□□□□□ -0.75
XRCC1-208ENST00000598422 ZNF493Q6ZR52 646 aa10.38□□□□□ -0.75
XRCC1-208ENST00000598422 EXOC3-AS1Q8N2X6 119 aa10.38□□□□□ -0.75
XRCC1-208ENST00000598422 TMEM263Q8WUH6 116 aaKnown RBP10.38□□□□□ -0.75
XRCC1-208ENST00000598422 PAXXQ9BUH6 204 aa10.38□□□□□ -0.75
XRCC1-208ENST00000598422 FUT9Q9Y231 359 aa10.38□□□□□ -0.75
XRCC1-208ENST00000598422 TIMM8BQ9Y5J9 83 aaPredicted RBP10.38□□□□□ -0.75
XRCC1-208ENST00000598422 OR10J4P0C629 311 aa10.37□□□□□ -0.75
XRCC1-208ENST00000598422 NBEAP1P0C6P0 100 aa10.37□□□□□ -0.75
XRCC1-208ENST00000598422 ICAM4Q14773 271 aa10.37□□□□□ -0.75
XRCC1-208ENST00000598422 KIR3DS1Q14943 382 aa10.37□□□□□ -0.75
XRCC1-208ENST00000598422 POM121L12Q8N7R1 296 aa10.37□□□□□ -0.75
XRCC1-208ENST00000598422 FAM167A-AS1Q96KT0 104 aa10.37□□□□□ -0.75
XRCC1-208ENST00000598422 TRAV12-3A0A0B4J271 114 aa10.36□□□□□ -0.75
XRCC1-208ENST00000598422 PLAC8L1A1L4L8 177 aa10.36□□□□□ -0.75
XRCC1-208ENST00000598422 TAS2R45P59539 299 aa10.36□□□□□ -0.75
XRCC1-208ENST00000598422 UBE2L3P68036 154 aaKnown RBP10.36□□□□□ -0.75
XRCC1-208ENST00000598422 ERCC8Q13216 396 aa10.36□□□□□ -0.75
XRCC1-208ENST00000598422 FCN2Q15485 313 aa10.36□□□□□ -0.75
XRCC1-208ENST00000598422 FAM122CQ6P4D5 195 aa10.36□□□□□ -0.75
XRCC1-208ENST00000598422 RNASE8Q8TDE3 154 aaKnown RBP10.36□□□□□ -0.75
XRCC1-208ENST00000598422 LINC00477Q96M19 166 aa10.36□□□□□ -0.75
XRCC1-208ENST00000598422 MED28Q9H204 178 aa10.36□□□□□ -0.75
XRCC1-208ENST00000598422 NOP10Q9NPE3 64 aaKnown RBP10.36□□□□□ -0.75
XRCC1-208ENST00000598422 IGKV2-40A0A087WW87 121 aaPredicted RBP10.35□□□□□ -0.75
XRCC1-208ENST00000598422 C7orf71A4D174 169 aa10.35□□□□□ -0.75
XRCC1-208ENST00000598422 SNURFLB1AK76 121 aa10.35□□□□□ -0.75
XRCC1-208ENST00000598422 F5H768 121 aa10.35□□□□□ -0.75
XRCC1-208ENST00000598422 IGKV2D-40P01614 121 aaPredicted RBP10.35□□□□□ -0.75
XRCC1-208ENST00000598422 SLC25A5P05141 298 aaKnown RBP10.35□□□□□ -0.75
XRCC1-208ENST00000598422 ATP5G1P05496 136 aa10.35□□□□□ -0.75
XRCC1-208ENST00000598422 CSN1S1P47710 185 aa10.35□□□□□ -0.75
XRCC1-208ENST00000598422 ATP5G3P48201 142 aa10.35□□□□□ -0.75
XRCC1-208ENST00000598422 KHDC3LQ587J8 217 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms