RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 PRB4P10163 310 aaPredicted RBP16.3■□□□□ 0.2
SSBP4-205ENST00000598159 CYCSP99999 105 aaKnown RBP16.3■□□□□ 0.2
SSBP4-205ENST00000598159 IFITM3Q01628 133 aa16.3■□□□□ 0.2
SSBP4-205ENST00000598159 NHLH2Q02577 135 aa16.3■□□□□ 0.2
SSBP4-205ENST00000598159 E5RGE8 158 aa16.29■□□□□ 0.2
SSBP4-205ENST00000598159 INMT-MINDY4F8WBC2 141 aa16.29■□□□□ 0.2
SSBP4-205ENST00000598159 SIX6O95475 246 aa16.29■□□□□ 0.2
SSBP4-205ENST00000598159 ZNF493Q6ZR52 646 aa16.29■□□□□ 0.2
SSBP4-205ENST00000598159 C16orf74Q96GX8 76 aa16.29■□□□□ 0.2
SSBP4-205ENST00000598159 ZNF586Q9NXT0 402 aa16.29■□□□□ 0.2
SSBP4-205ENST00000598159 PLAC8L1A1L4L8 177 aa16.28■□□□□ 0.2
SSBP4-205ENST00000598159 PRAC2D3DTV9 90 aa16.28■□□□□ 0.2
SSBP4-205ENST00000598159 H7BYZ3 331 aa16.28■□□□□ 0.2
SSBP4-205ENST00000598159 HTN1P15515 57 aa16.28■□□□□ 0.2
SSBP4-205ENST00000598159 TMEM14CQ9P0S9 112 aa16.28■□□□□ 0.2
SSBP4-205ENST00000598159 DEFB130BP0DP73 79 aa16.27■□□□□ 0.2
SSBP4-205ENST00000598159 DEFB130AP0DP74 79 aa16.27■□□□□ 0.2
SSBP4-205ENST00000598159 RNF212Q495C1 297 aa16.27■□□□□ 0.2
SSBP4-205ENST00000598159 TMEM88Q6PEY1 159 aa16.27■□□□□ 0.2
SSBP4-205ENST00000598159 UBE2DNLQ8IWF7 75 aa16.27■□□□□ 0.2
SSBP4-205ENST00000598159 NPCDR1Q9BY65 106 aa16.27■□□□□ 0.2
SSBP4-205ENST00000598159 TIMM8BQ9Y5J9 83 aaPredicted RBP16.27■□□□□ 0.2
SSBP4-205ENST00000598159 DNAH6Q9C0G6 4158 aa16.27■□□□□ 0.19
SSBP4-205ENST00000598159 HIST1H1EP10412 219 aaKnown RBP16.26■□□□□ 0.19
SSBP4-205ENST00000598159 FCN2Q15485 313 aa16.26■□□□□ 0.19
SSBP4-205ENST00000598159 C15orf53Q8NAA6 179 aa16.26■□□□□ 0.19
SSBP4-205ENST00000598159 OR5C1Q8NGR4 320 aa16.26■□□□□ 0.19
SSBP4-205ENST00000598159 MRPL53Q96EL3 112 aaKnown RBP16.26■□□□□ 0.19
SSBP4-205ENST00000598159 MARVELD1Q9BSK0 173 aa16.26■□□□□ 0.19
SSBP4-205ENST00000598159 DNAH10Q8IVF4 4471 aa16.26■□□□□ 0.19
SSBP4-205ENST00000598159 TRBV19A0A075B6N1 114 aa16.25■□□□□ 0.19
SSBP4-205ENST00000598159 CBY3A6NI87 242 aa16.25■□□□□ 0.19
SSBP4-205ENST00000598159 LINC00336Q6ZUF6 198 aa16.25■□□□□ 0.19
SSBP4-205ENST00000598159 ODF3Q96PU9 254 aa16.25■□□□□ 0.19
SSBP4-205ENST00000598159 OR5AC2Q9NZP5 309 aa16.25■□□□□ 0.19
SSBP4-205ENST00000598159 PRELID1Q9Y255 219 aa16.25■□□□□ 0.19
SSBP4-205ENST00000598159 LEPP41159 167 aa16.24■□□□□ 0.19
SSBP4-205ENST00000598159 DEFA1P59665 94 aa16.24■□□□□ 0.19
SSBP4-205ENST00000598159 DEFA3P59666 94 aa16.24■□□□□ 0.19
SSBP4-205ENST00000598159 PDE6HQ13956 83 aa16.24■□□□□ 0.19
SSBP4-205ENST00000598159 LGALS9BQ3B8N2 356 aa16.24■□□□□ 0.19
SSBP4-205ENST00000598159 LRRC37A5PQ49AS3 106 aa16.24■□□□□ 0.19
SSBP4-205ENST00000598159 CCDC28AQ8IWP9 274 aa16.24■□□□□ 0.19
SSBP4-205ENST00000598159 TMEM263Q8WUH6 116 aaKnown RBP16.24■□□□□ 0.19
SSBP4-205ENST00000598159 TIMM9Q9Y5J7 89 aa16.24■□□□□ 0.19
SSBP4-205ENST00000598159 NPIPB6E9PJ23 425 aa16.23■□□□□ 0.19
SSBP4-205ENST00000598159 H0YIZ8 118 aa16.23■□□□□ 0.19
SSBP4-205ENST00000598159 ATP5G1P05496 136 aa16.23■□□□□ 0.19
SSBP4-205ENST00000598159 CT45A10P0DMU9 189 aa16.23■□□□□ 0.19
SSBP4-205ENST00000598159 ATP5G3P48201 142 aa16.23■□□□□ 0.19
SSBP4-205ENST00000598159 KIR3DS1Q14943 382 aa16.23■□□□□ 0.19
SSBP4-205ENST00000598159 THAP6Q8TBB0 222 aa16.23■□□□□ 0.19
SSBP4-205ENST00000598159 RNASE8Q8TDE3 154 aaKnown RBP16.23■□□□□ 0.19
SSBP4-205ENST00000598159 PARD6GQ9BYG4 376 aaPredicted RBP16.23■□□□□ 0.19
SSBP4-205ENST00000598159 GFI1BQ5VTD9 330 aa16.22■□□□□ 0.19
SSBP4-205ENST00000598159 F5H768 121 aa16.21■□□□□ 0.19
SSBP4-205ENST00000598159 M0R2N4 97 aa16.21■□□□□ 0.19
SSBP4-205ENST00000598159 NDUFB4O95168 129 aa16.21■□□□□ 0.19
SSBP4-205ENST00000598159 H2BFSP57053 126 aa16.21■□□□□ 0.19
SSBP4-205ENST00000598159 GCSAMLQ5JQS6 135 aa16.21■□□□□ 0.19
SSBP4-205ENST00000598159 LINC00477Q96M19 166 aa16.21■□□□□ 0.19
SSBP4-205ENST00000598159 WDR61Q9GZS3 305 aaKnown RBP16.21■□□□□ 0.19
SSBP4-205ENST00000598159 NOP10Q9NPE3 64 aaKnown RBP16.21■□□□□ 0.19
SSBP4-205ENST00000598159 KCNIP2Q9NS61 270 aa16.21■□□□□ 0.19
SSBP4-205ENST00000598159 PYYP10082 97 aa16.2■□□□□ 0.18
SSBP4-205ENST00000598159 CLINT1Q14677 625 aa16.2■□□□□ 0.18
SSBP4-205ENST00000598159 BLNKQ8WV28 456 aa16.2■□□□□ 0.18
SSBP4-205ENST00000598159 PPP1R1CQ8WVI7 109 aa16.2■□□□□ 0.18
SSBP4-205ENST00000598159 AAMDCQ9H7C9 122 aa16.2■□□□□ 0.18
SSBP4-205ENST00000598159 C17orf112F2Z3M2 114 aa16.19■□□□□ 0.18
SSBP4-205ENST00000598159 M0R3E3 92 aa16.19■□□□□ 0.18
SSBP4-205ENST00000598159 SSNA1O43805 119 aa16.19■□□□□ 0.18
SSBP4-205ENST00000598159 FAM3BP58499 235 aaPredicted RBP16.19■□□□□ 0.18
SSBP4-205ENST00000598159 SLC25A2Q9BXI2 301 aa16.19■□□□□ 0.18
SSBP4-205ENST00000598159 TRAV12-3A0A0B4J271 114 aa16.18■□□□□ 0.18
SSBP4-205ENST00000598159 J3KRW8 73 aa16.18■□□□□ 0.18
SSBP4-205ENST00000598159 SLC25A5P05141 298 aaKnown RBP16.18■□□□□ 0.18
SSBP4-205ENST00000598159 PET100P0DJ07 73 aa16.18■□□□□ 0.18
SSBP4-205ENST00000598159 MIR17HGQ75NE6 70 aa16.18■□□□□ 0.18
SSBP4-205ENST00000598159 FAM167A-AS1Q96KT0 104 aa16.18■□□□□ 0.18
SSBP4-205ENST00000598159 PYGO2Q9BRQ0 406 aa16.18■□□□□ 0.18
SSBP4-205ENST00000598159 MRPL32Q9BYC8 188 aaKnown RBP16.18■□□□□ 0.18
SSBP4-205ENST00000598159 OR51M1Q9H341 326 aa16.18■□□□□ 0.18
SSBP4-205ENST00000598159 NBEAP1P0C6P0 100 aa16.17■□□□□ 0.18
SSBP4-205ENST00000598159 BATF3Q9NR55 127 aa16.17■□□□□ 0.18
SSBP4-205ENST00000598159 IGLV2-18A0A075B6J9 118 aa16.16■□□□□ 0.18
SSBP4-205ENST00000598159 MPC2O95563 127 aa16.16■□□□□ 0.18
SSBP4-205ENST00000598159 ERCC8Q13216 396 aa16.16■□□□□ 0.18
SSBP4-205ENST00000598159 Q6ZR54 194 aa16.16■□□□□ 0.18
SSBP4-205ENST00000598159 EXOC3-AS1Q8N2X6 119 aa16.16■□□□□ 0.18
SSBP4-205ENST00000598159 ATP5SQ99766 215 aa16.16■□□□□ 0.18
SSBP4-205ENST00000598159 ATG101Q9BSB4 218 aa16.16■□□□□ 0.18
SSBP4-205ENST00000598159 AGPAT4-IT1Q9H0P7 198 aa16.16■□□□□ 0.18
SSBP4-205ENST00000598159 SNURFLB1AK76 121 aa16.15■□□□□ 0.18
SSBP4-205ENST00000598159 ICAM4Q14773 271 aa16.15■□□□□ 0.18
SSBP4-205ENST00000598159 C9orf47Q6ZRZ4 202 aa16.15■□□□□ 0.18
SSBP4-205ENST00000598159 LINC00612Q8N6U2 182 aa16.15■□□□□ 0.18
SSBP4-205ENST00000598159 FAM19A4Q96LR4 140 aa16.15■□□□□ 0.18
SSBP4-205ENST00000598159 PAXXQ9BUH6 204 aa16.15■□□□□ 0.18
SSBP4-205ENST00000598159 FUT9Q9Y231 359 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms