RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 HLA-DRB4P13762 266 aa16.31■□□□□ 0.2
CHMP2A-204ENST00000597848 OR4B1Q8NGF8 309 aa16.31■□□□□ 0.2
CHMP2A-204ENST00000597848 B9D2Q9BPU9 175 aa16.31■□□□□ 0.2
CHMP2A-204ENST00000597848 Q9H3A6 140 aa16.31■□□□□ 0.2
CHMP2A-204ENST00000597848 PRELID1Q9Y255 219 aa16.31■□□□□ 0.2
CHMP2A-204ENST00000597848 HLA-DRB4X5D2U9 266 aa16.31■□□□□ 0.2
CHMP2A-204ENST00000597848 A0A0J9YX75 114 aa16.3■□□□□ 0.2
CHMP2A-204ENST00000597848 H2AFB1P0C5Y9 115 aa16.3■□□□□ 0.2
CHMP2A-204ENST00000597848 ZNF705DP0CH99 300 aaPredicted RBP16.3■□□□□ 0.2
CHMP2A-204ENST00000597848 ZNF705BP0CI00 300 aaPredicted RBP16.3■□□□□ 0.2
CHMP2A-204ENST00000597848 SULT1A2P50226 295 aa16.3■□□□□ 0.2
CHMP2A-204ENST00000597848 APOC4P55056 127 aa16.3■□□□□ 0.2
CHMP2A-204ENST00000597848 HAGHQ16775 308 aa16.3■□□□□ 0.2
CHMP2A-204ENST00000597848 FAM74A1Q5RGS3 127 aa16.3■□□□□ 0.2
CHMP2A-204ENST00000597848 ALKAL2Q6UX46 152 aa16.3■□□□□ 0.2
CHMP2A-204ENST00000597848 TRPT1Q86TN4 253 aaKnown RBP16.3■□□□□ 0.2
CHMP2A-204ENST00000597848 LYPD1Q8N2G4 141 aa16.3■□□□□ 0.2
CHMP2A-204ENST00000597848 TMPRSS5Q9H3S3 457 aa16.3■□□□□ 0.2
CHMP2A-204ENST00000597848 A0A1B0GV50 99 aa16.29■□□□□ 0.2
CHMP2A-204ENST00000597848 M0R3E3 92 aa16.29■□□□□ 0.2
CHMP2A-204ENST00000597848 HIST1H1AQ02539 215 aaPredicted RBP16.29■□□□□ 0.2
CHMP2A-204ENST00000597848 SBSPONQ8IVN8 264 aa16.29■□□□□ 0.2
CHMP2A-204ENST00000597848 OR8A1Q8NGG7 326 aa16.29■□□□□ 0.2
CHMP2A-204ENST00000597848 MBD3L1Q8WWY6 194 aa16.29■□□□□ 0.2
CHMP2A-204ENST00000597848 PGPA6NDG6 321 aa16.28■□□□□ 0.2
CHMP2A-204ENST00000597848 PRAC2D3DTV9 90 aa16.28■□□□□ 0.2
CHMP2A-204ENST00000597848 DUSP14O95147 198 aaKnown RBP16.28■□□□□ 0.2
CHMP2A-204ENST00000597848 MRPL53Q96EL3 112 aaKnown RBP16.28■□□□□ 0.2
CHMP2A-204ENST00000597848 CSTL1Q9H114 145 aa16.28■□□□□ 0.2
CHMP2A-204ENST00000597848 OTORQ9NRC9 128 aa16.28■□□□□ 0.2
CHMP2A-204ENST00000597848 CSN1S1P47710 185 aa16.27■□□□□ 0.2
CHMP2A-204ENST00000597848 CNN1P51911 297 aaKnown RBP16.27■□□□□ 0.2
CHMP2A-204ENST00000597848 OR10J6PQ8NGY7 276 aa16.27■□□□□ 0.2
CHMP2A-204ENST00000597848 SUN5Q8TC36 379 aa16.27■□□□□ 0.2
CHMP2A-204ENST00000597848 KIR2DL5BA0A0G2JN68 375 aa16.26■□□□□ 0.19
CHMP2A-204ENST00000597848 KIR2DL5BA0A0G2JPC4 375 aa16.26■□□□□ 0.19
CHMP2A-204ENST00000597848 MORN3Q6PF18 240 aaPredicted RBP16.26■□□□□ 0.19
CHMP2A-204ENST00000597848 KIR2DL5AQ8N109 375 aa16.26■□□□□ 0.19
CHMP2A-204ENST00000597848 KIR2DL5BQ8NHK3 375 aa16.26■□□□□ 0.19
CHMP2A-204ENST00000597848 CMTM2Q8TAZ6 248 aa16.26■□□□□ 0.19
CHMP2A-204ENST00000597848 ZNF705EA8MWA4 302 aaPredicted RBP16.25■□□□□ 0.19
CHMP2A-204ENST00000597848 UBE2G2P60604 165 aa16.25■□□□□ 0.19
CHMP2A-204ENST00000597848 NUTF2P61970 127 aaKnown RBP16.25■□□□□ 0.19
CHMP2A-204ENST00000597848 PPP1R14DQ9NXH3 145 aa16.25■□□□□ 0.19
CHMP2A-204ENST00000597848 AGRNO00468 2067 aa16.25■□□□□ 0.19
CHMP2A-204ENST00000597848 TEX46H3BTG2 121 aa16.24■□□□□ 0.19
CHMP2A-204ENST00000597848 UBE2CO00762 179 aa16.24■□□□□ 0.19
CHMP2A-204ENST00000597848 CA1P00915 261 aaPredicted RBP16.24■□□□□ 0.19
CHMP2A-204ENST00000597848 RXFP4Q8TDU9 374 aa16.24■□□□□ 0.19
CHMP2A-204ENST00000597848 SLC25A5P05141 298 aaKnown RBP16.23■□□□□ 0.19
CHMP2A-204ENST00000597848 FXYD7P58549 80 aa16.23■□□□□ 0.19
CHMP2A-204ENST00000597848 SUMO1P63165 101 aaKnown RBP16.23■□□□□ 0.19
CHMP2A-204ENST00000597848 CLUHP3Q96NS8 147 aa16.23■□□□□ 0.19
CHMP2A-204ENST00000597848 RPH3ALQ9UNE2 315 aa16.23■□□□□ 0.19
CHMP2A-204ENST00000597848 A0A1W2PRE2 83 aa16.22■□□□□ 0.19
CHMP2A-204ENST00000597848 YTHDF2Q9Y5A9 579 aaKnown RBP16.22■□□□□ 0.19
CHMP2A-204ENST00000597848 IGKV2-40A0A087WW87 121 aaPredicted RBP16.21■□□□□ 0.19
CHMP2A-204ENST00000597848 TRAV1-1A0A0B4J248 108 aa16.21■□□□□ 0.19
CHMP2A-204ENST00000597848 IGKV2D-40P01614 121 aaPredicted RBP16.21■□□□□ 0.19
CHMP2A-204ENST00000597848 HBE1P02100 147 aa16.21■□□□□ 0.19
CHMP2A-204ENST00000597848 ERCC8Q13216 396 aa16.21■□□□□ 0.19
CHMP2A-204ENST00000597848 SLC35B3Q9H1N7 401 aa16.21■□□□□ 0.19
CHMP2A-204ENST00000597848 ZMAT4Q9H898 229 aa16.21■□□□□ 0.19
CHMP2A-204ENST00000597848 DIRC3C9JPN6 131 aa16.2■□□□□ 0.18
CHMP2A-204ENST00000597848 NHLRC4P0CG21 123 aaPredicted RBP16.2■□□□□ 0.18
CHMP2A-204ENST00000597848 BLOC1S1P78537 153 aa16.2■□□□□ 0.18
CHMP2A-204ENST00000597848 DEFB135Q30KP9 77 aa16.2■□□□□ 0.18
CHMP2A-204ENST00000597848 CST9LP1Q5W188 147 aa16.2■□□□□ 0.18
CHMP2A-204ENST00000597848 SPATA25Q9BR10 227 aa16.2■□□□□ 0.18
CHMP2A-204ENST00000597848 XCL2Q9UBD3 114 aa16.2■□□□□ 0.18
CHMP2A-204ENST00000597848 FAM74A7A6NL05 159 aa16.19■□□□□ 0.18
CHMP2A-204ENST00000597848 A8MTW9 85 aa16.19■□□□□ 0.18
CHMP2A-204ENST00000597848 GGTLC3B5MD39 225 aa16.19■□□□□ 0.18
CHMP2A-204ENST00000597848 NPIPB6E9PJ23 425 aa16.19■□□□□ 0.18
CHMP2A-204ENST00000597848 IFNA7P01567 189 aa16.19■□□□□ 0.18
CHMP2A-204ENST00000597848 PPT1P50897 306 aa16.19■□□□□ 0.18
CHMP2A-204ENST00000597848 GNG5P63218 68 aa16.19■□□□□ 0.18
CHMP2A-204ENST00000597848 CCL20P78556 96 aa16.19■□□□□ 0.18
CHMP2A-204ENST00000597848 AMTNQ6UX39 209 aa16.19■□□□□ 0.18
CHMP2A-204ENST00000597848 Q6ZWC4 215 aa16.19■□□□□ 0.18
CHMP2A-204ENST00000597848 C5orf17Q8NAS9 161 aa16.19■□□□□ 0.18
CHMP2A-204ENST00000597848 TM2D3Q9BRN9 247 aa16.19■□□□□ 0.18
CHMP2A-204ENST00000597848 C1QTNF4Q9BXJ3 329 aa16.19■□□□□ 0.18
CHMP2A-204ENST00000597848 NKX6-2Q9C056 277 aaPredicted RBP16.19■□□□□ 0.18
CHMP2A-204ENST00000597848 RETNQ9HD89 108 aa16.19■□□□□ 0.18
CHMP2A-204ENST00000597848 PAGE4O60829 102 aa16.18■□□□□ 0.18
CHMP2A-204ENST00000597848 GIG44P09565 113 aaPredicted RBP16.18■□□□□ 0.18
CHMP2A-204ENST00000597848 TMEM78Q5T7P6 136 aa16.18■□□□□ 0.18
CHMP2A-204ENST00000597848 TEX261Q6UWH6 196 aa16.18■□□□□ 0.18
CHMP2A-204ENST00000597848 GOLT1AQ6ZVE7 132 aa16.18■□□□□ 0.18
CHMP2A-204ENST00000597848 ARL6IP6Q8N6S5 226 aa16.18■□□□□ 0.18
CHMP2A-204ENST00000597848 LINC00477Q96M19 166 aa16.18■□□□□ 0.18
CHMP2A-204ENST00000597848 VGLL1Q99990 258 aa16.18■□□□□ 0.18
CHMP2A-204ENST00000597848 AGPAT4-IT1Q9H0P7 198 aa16.18■□□□□ 0.18
CHMP2A-204ENST00000597848 M0R2Z0 102 aa16.17■□□□□ 0.18
CHMP2A-204ENST00000597848 CT45A10P0DMU9 189 aa16.17■□□□□ 0.18
CHMP2A-204ENST00000597848 SPINK13Q1W4C9 94 aa16.17■□□□□ 0.18
CHMP2A-204ENST00000597848 C9orf47Q6ZRZ4 202 aa16.17■□□□□ 0.18
CHMP2A-204ENST00000597848 RCHY1Q96PM5 261 aa16.17■□□□□ 0.18
CHMP2A-204ENST00000597848 GNG13Q9P2W3 67 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms