RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 P0DMU3 169 aa9.22□□□□□ -0.93
LIG1-212ENST00000596549 FAM231AP0DMU4 169 aa9.22□□□□□ -0.93
LIG1-212ENST00000596549 FAM231CP0DMU5 169 aa9.22□□□□□ -0.93
LIG1-212ENST00000596549 H2BFSP57053 126 aa9.22□□□□□ -0.93
LIG1-212ENST00000596549 GFI1BQ5VTD9 330 aa9.22□□□□□ -0.93
LIG1-212ENST00000596549 TMEM88Q6PEY1 159 aa9.22□□□□□ -0.93
LIG1-212ENST00000596549 POM121L12Q8N7R1 296 aa9.22□□□□□ -0.93
LIG1-212ENST00000596549 THAP6Q8TBB0 222 aa9.22□□□□□ -0.93
LIG1-212ENST00000596549 RNASE8Q8TDE3 154 aaKnown RBP9.22□□□□□ -0.93
LIG1-212ENST00000596549 FAM210BQ96KR6 192 aa9.22□□□□□ -0.93
LIG1-212ENST00000596549 NMES1Q9C002 83 aa9.22□□□□□ -0.93
LIG1-212ENST00000596549 DNAH2Q9P225 4427 aa9.21□□□□□ -0.93
LIG1-212ENST00000596549 LYRM9A8MSI8 78 aa9.21□□□□□ -0.94
LIG1-212ENST00000596549 NPIPB6E9PJ23 425 aa9.21□□□□□ -0.94
LIG1-212ENST00000596549 INMT-MINDY4F8WBC2 141 aa9.21□□□□□ -0.94
LIG1-212ENST00000596549 M0R3E3 92 aa9.21□□□□□ -0.94
LIG1-212ENST00000596549 ZNF253O75346 499 aa9.21□□□□□ -0.94
LIG1-212ENST00000596549 PYYP10082 97 aa9.21□□□□□ -0.94
LIG1-212ENST00000596549 TAS2R60P59551 318 aa9.21□□□□□ -0.94
LIG1-212ENST00000596549 FCN2Q15485 313 aa9.21□□□□□ -0.94
LIG1-212ENST00000596549 ATP6V1FQ16864 119 aa9.21□□□□□ -0.94
LIG1-212ENST00000596549 TMEM256Q8N2U0 113 aa9.21□□□□□ -0.94
LIG1-212ENST00000596549 OR5C1Q8NGR4 320 aa9.21□□□□□ -0.94
LIG1-212ENST00000596549 MARVELD1Q9BSK0 173 aa9.21□□□□□ -0.94
LIG1-212ENST00000596549 TRBV19A0A075B6N1 114 aa9.2□□□□□ -0.94
LIG1-212ENST00000596549 E5RGE8 158 aa9.2□□□□□ -0.94
LIG1-212ENST00000596549 MPDU1O75352 247 aa9.2□□□□□ -0.94
LIG1-212ENST00000596549 NDUFB4O95168 129 aa9.2□□□□□ -0.94
LIG1-212ENST00000596549 GUK1Q16774 197 aa9.2□□□□□ -0.94
LIG1-212ENST00000596549 C16orf74Q96GX8 76 aa9.2□□□□□ -0.94
LIG1-212ENST00000596549 LINC01587Q99440 93 aa9.2□□□□□ -0.94
LIG1-212ENST00000596549 SLC25A2Q9BXI2 301 aa9.2□□□□□ -0.94
LIG1-212ENST00000596549 PPP1R14DQ9NXH3 145 aa9.2□□□□□ -0.94
LIG1-212ENST00000596549 TMEM14CQ9P0S9 112 aa9.2□□□□□ -0.94
LIG1-212ENST00000596549 FAT2Q9NYQ8 4349 aa9.19□□□□□ -0.94
LIG1-212ENST00000596549 CT45A10P0DMU9 189 aa9.19□□□□□ -0.94
LIG1-212ENST00000596549 DEFB130BP0DP73 79 aa9.19□□□□□ -0.94
LIG1-212ENST00000596549 DEFB130AP0DP74 79 aa9.19□□□□□ -0.94
LIG1-212ENST00000596549 CLINT1Q14677 625 aa9.19□□□□□ -0.94
LIG1-212ENST00000596549 OR10J6PQ8NGY7 276 aa9.19□□□□□ -0.94
LIG1-212ENST00000596549 TMEM263Q8WUH6 116 aaKnown RBP9.19□□□□□ -0.94
LIG1-212ENST00000596549 FAM167A-AS1Q96KT0 104 aa9.19□□□□□ -0.94
LIG1-212ENST00000596549 ODF3Q96PU9 254 aa9.19□□□□□ -0.94
LIG1-212ENST00000596549 C20orf144Q9BQM9 153 aa9.19□□□□□ -0.94
LIG1-212ENST00000596549 WDR61Q9GZS3 305 aaKnown RBP9.19□□□□□ -0.94
LIG1-212ENST00000596549 H7BYZ3 331 aa9.18□□□□□ -0.94
LIG1-212ENST00000596549 J3KRW8 73 aa9.18□□□□□ -0.94
LIG1-212ENST00000596549 HTN1P15515 57 aa9.18□□□□□ -0.94
LIG1-212ENST00000596549 MIR17HGQ75NE6 70 aa9.18□□□□□ -0.94
LIG1-212ENST00000596549 PPP1R1CQ8WVI7 109 aa9.18□□□□□ -0.94
LIG1-212ENST00000596549 MRPL53Q96EL3 112 aaKnown RBP9.18□□□□□ -0.94
LIG1-212ENST00000596549 SLC25A31Q9H0C2 315 aa9.18□□□□□ -0.94
LIG1-212ENST00000596549 M0R2N4 97 aa9.17□□□□□ -0.94
LIG1-212ENST00000596549 HIST1H1EP10412 219 aaKnown RBP9.17□□□□□ -0.94
LIG1-212ENST00000596549 UBE2DNLQ8IWF7 75 aa9.17□□□□□ -0.94
LIG1-212ENST00000596549 EXOC3-AS1Q8N2X6 119 aa9.17□□□□□ -0.94
LIG1-212ENST00000596549 IGLV2-18A0A075B6J9 118 aa9.16□□□□□ -0.94
LIG1-212ENST00000596549 A0A1B0GVY2 172 aa9.16□□□□□ -0.94
LIG1-212ENST00000596549 RTL8CO15255 209 aa9.16□□□□□ -0.94
LIG1-212ENST00000596549 MPC2O95563 127 aa9.16□□□□□ -0.94
LIG1-212ENST00000596549 RLN2P04090 185 aa9.16□□□□□ -0.94
LIG1-212ENST00000596549 ERCC8Q13216 396 aa9.16□□□□□ -0.94
LIG1-212ENST00000596549 PDE6HQ13956 83 aa9.16□□□□□ -0.94
LIG1-212ENST00000596549 LINC00612Q8N6U2 182 aa9.16□□□□□ -0.94
LIG1-212ENST00000596549 C15orf53Q8NAA6 179 aa9.16□□□□□ -0.94
LIG1-212ENST00000596549 BLNKQ8WV28 456 aa9.16□□□□□ -0.94
LIG1-212ENST00000596549 FAM19A4Q96LR4 140 aa9.16□□□□□ -0.94
LIG1-212ENST00000596549 NOP10Q9NPE3 64 aaKnown RBP9.16□□□□□ -0.94
LIG1-212ENST00000596549 HSPB11Q9Y547 144 aa9.16□□□□□ -0.94
LIG1-212ENST00000596549 TIMM8BQ9Y5J9 83 aaPredicted RBP9.16□□□□□ -0.94
LIG1-212ENST00000596549 IGKV2-40A0A087WW87 121 aaPredicted RBP9.15□□□□□ -0.94
LIG1-212ENST00000596549 TRAV12-3A0A0B4J271 114 aa9.15□□□□□ -0.94
LIG1-212ENST00000596549 SSNA1O43805 119 aa9.15□□□□□ -0.94
LIG1-212ENST00000596549 IGKV2D-40P01614 121 aaPredicted RBP9.15□□□□□ -0.94
LIG1-212ENST00000596549 ATP5G1P05496 136 aa9.15□□□□□ -0.94
LIG1-212ENST00000596549 LEPP41159 167 aa9.15□□□□□ -0.94
LIG1-212ENST00000596549 ATP5G3P48201 142 aa9.15□□□□□ -0.94
LIG1-212ENST00000596549 DEFA1P59665 94 aa9.15□□□□□ -0.94
LIG1-212ENST00000596549 DEFA3P59666 94 aa9.15□□□□□ -0.94
LIG1-212ENST00000596549 CYCSP99999 105 aaKnown RBP9.15□□□□□ -0.94
LIG1-212ENST00000596549 BTN1A1Q13410 526 aa9.15□□□□□ -0.94
LIG1-212ENST00000596549 LGALS9BQ3B8N2 356 aa9.15□□□□□ -0.94
LIG1-212ENST00000596549 ZNF493Q6ZR52 646 aa9.15□□□□□ -0.94
LIG1-212ENST00000596549 Q6ZR54 194 aa9.15□□□□□ -0.94
LIG1-212ENST00000596549 FXYD5Q96DB9 178 aa9.15□□□□□ -0.94
LIG1-212ENST00000596549 ZNF503Q96F45 646 aa9.15□□□□□ -0.94
LIG1-212ENST00000596549 PHYHIPLQ96FC7 376 aa9.15□□□□□ -0.94
LIG1-212ENST00000596549 ATP5SQ99766 215 aa9.15□□□□□ -0.94
LIG1-212ENST00000596549 MRPL32Q9BYC8 188 aaKnown RBP9.15□□□□□ -0.94
LIG1-212ENST00000596549 MBD2Q9UBB5 411 aa9.15□□□□□ -0.94
LIG1-212ENST00000596549 DNAH17Q9UFH2 4485 aa9.14□□□□□ -0.95
LIG1-212ENST00000596549 CBY3A6NI87 242 aa9.14□□□□□ -0.95
LIG1-212ENST00000596549 KLLNB2CW77 178 aa9.14□□□□□ -0.95
LIG1-212ENST00000596549 F5H768 121 aa9.14□□□□□ -0.95
LIG1-212ENST00000596549 OR10J4P0C629 311 aa9.14□□□□□ -0.95
LIG1-212ENST00000596549 ICAM4Q14773 271 aa9.14□□□□□ -0.95
LIG1-212ENST00000596549 RNF212Q495C1 297 aa9.14□□□□□ -0.95
LIG1-212ENST00000596549 PRR9Q5T870 116 aa9.14□□□□□ -0.95
LIG1-212ENST00000596549 AGPAT4-IT1Q9H0P7 198 aa9.14□□□□□ -0.95
LIG1-212ENST00000596549 KCNIP2Q9NS61 270 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms