RNA–Protein interactions for RNA: ENST00000595874.1

SHKBP1-210, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 203 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-210ENST00000595874 P0DMU3 169 aa7.28□□□□□ -1.24
SHKBP1-210ENST00000595874 FAM231AP0DMU4 169 aa7.28□□□□□ -1.24
SHKBP1-210ENST00000595874 FAM231CP0DMU5 169 aa7.28□□□□□ -1.24
SHKBP1-210ENST00000595874 CT45A10P0DMU9 189 aa7.28□□□□□ -1.24
SHKBP1-210ENST00000595874 IGLC2P0DOY2 106 aa7.28□□□□□ -1.24
SHKBP1-210ENST00000595874 CDKN1BP46527 198 aa7.28□□□□□ -1.24
SHKBP1-210ENST00000595874 IL15RAQ13261 267 aa7.28□□□□□ -1.24
SHKBP1-210ENST00000595874 GFI1BQ5VTD9 330 aa7.28□□□□□ -1.24
SHKBP1-210ENST00000595874 FAM122CQ6P4D5 195 aa7.28□□□□□ -1.24
SHKBP1-210ENST00000595874 MIR17HGQ75NE6 70 aa7.28□□□□□ -1.24
SHKBP1-210ENST00000595874 S100A7AQ86SG5 101 aa7.28□□□□□ -1.24
SHKBP1-210ENST00000595874 OR5C1Q8NGR4 320 aa7.28□□□□□ -1.24
SHKBP1-210ENST00000595874 OR1L4Q8NGR5 311 aa7.28□□□□□ -1.24
SHKBP1-210ENST00000595874 SLC50A1Q9BRV3 221 aa7.28□□□□□ -1.24
SHKBP1-210ENST00000595874 DNAH17Q9UFH2 4485 aa7.27□□□□□ -1.25
SHKBP1-210ENST00000595874 IGKV2-40A0A087WW87 121 aaPredicted RBP7.27□□□□□ -1.25
SHKBP1-210ENST00000595874 A0A0J9YY99 117 aa7.27□□□□□ -1.25
SHKBP1-210ENST00000595874 GAGE12BA1L429 117 aa7.27□□□□□ -1.25
SHKBP1-210ENST00000595874 A6NHS1 94 aa7.27□□□□□ -1.25
SHKBP1-210ENST00000595874 GAGE7O76087 117 aa7.27□□□□□ -1.25
SHKBP1-210ENST00000595874 IGKV2D-40P01614 121 aaPredicted RBP7.27□□□□□ -1.25
SHKBP1-210ENST00000595874 GAGE12FP0CL80 117 aa7.27□□□□□ -1.25
SHKBP1-210ENST00000595874 GAGE12GP0CL81 117 aa7.27□□□□□ -1.25
SHKBP1-210ENST00000595874 GAGE12IP0CL82 117 aa7.27□□□□□ -1.25
SHKBP1-210ENST00000595874 S100A11P31949 105 aa7.27□□□□□ -1.25
SHKBP1-210ENST00000595874 HBG1P69891 147 aa7.27□□□□□ -1.25
SHKBP1-210ENST00000595874 HBG2P69892 147 aa7.27□□□□□ -1.25
SHKBP1-210ENST00000595874 PXDC1Q5TGL8 231 aa7.27□□□□□ -1.25
SHKBP1-210ENST00000595874 SAT2Q96F10 170 aaPredicted RBP7.27□□□□□ -1.25
SHKBP1-210ENST00000595874 TIMM9Q9Y5J7 89 aa7.27□□□□□ -1.25
SHKBP1-210ENST00000595874 SSNA1O43805 119 aa7.26□□□□□ -1.25
SHKBP1-210ENST00000595874 RLN2P04090 185 aa7.26□□□□□ -1.25
SHKBP1-210ENST00000595874 OR10J4P0C629 311 aa7.26□□□□□ -1.25
SHKBP1-210ENST00000595874 CXCL2P19875 107 aa7.26□□□□□ -1.25
SHKBP1-210ENST00000595874 RPL29P47914 159 aaKnown RBP7.26□□□□□ -1.25
SHKBP1-210ENST00000595874 BTN1A1Q13410 526 aa7.26□□□□□ -1.25
SHKBP1-210ENST00000595874 OR5I1Q13606 314 aa7.26□□□□□ -1.25
SHKBP1-210ENST00000595874 VWC2Q2TAL6 325 aa7.26□□□□□ -1.25
SHKBP1-210ENST00000595874 Q6ZQT7 251 aa7.26□□□□□ -1.25
SHKBP1-210ENST00000595874 PFDN5Q99471 154 aa7.26□□□□□ -1.25
SHKBP1-210ENST00000595874 ATG101Q9BSB4 218 aa7.26□□□□□ -1.25
SHKBP1-210ENST00000595874 SLC25A2Q9BXI2 301 aa7.26□□□□□ -1.25
SHKBP1-210ENST00000595874 NPCDR1Q9BY65 106 aa7.26□□□□□ -1.25
SHKBP1-210ENST00000595874 TEX48A0A1B0GUV7 120 aa7.25□□□□□ -1.25
SHKBP1-210ENST00000595874 PRSS29PA6NIE9 313 aa7.25□□□□□ -1.25
SHKBP1-210ENST00000595874 LYRM9A8MSI8 78 aa7.25□□□□□ -1.25
SHKBP1-210ENST00000595874 RTL8CO15255 209 aa7.25□□□□□ -1.25
SHKBP1-210ENST00000595874 NDUFB4O95168 129 aa7.25□□□□□ -1.25
SHKBP1-210ENST00000595874 RNASE4P34096 147 aaKnown RBP7.25□□□□□ -1.25
SHKBP1-210ENST00000595874 TAS2R60P59551 318 aa7.25□□□□□ -1.25
SHKBP1-210ENST00000595874 CD300CQ08708 224 aa7.25□□□□□ -1.25
SHKBP1-210ENST00000595874 ICAM4Q14773 271 aa7.25□□□□□ -1.25
SHKBP1-210ENST00000595874 ATP6V1FQ16864 119 aa7.25□□□□□ -1.25
SHKBP1-210ENST00000595874 C16orf74Q96GX8 76 aa7.25□□□□□ -1.25
SHKBP1-210ENST00000595874 PTTG2Q9NZH5 202 aa7.25□□□□□ -1.25
SHKBP1-210ENST00000595874 RPH3ALQ9UNE2 315 aa7.25□□□□□ -1.25
SHKBP1-210ENST00000595874 DNAH2Q9P225 4427 aa7.25□□□□□ -1.25
SHKBP1-210ENST00000595874 TRBV19A0A075B6N1 114 aa7.24□□□□□ -1.25
SHKBP1-210ENST00000595874 E5RGE8 158 aa7.24□□□□□ -1.25
SHKBP1-210ENST00000595874 ATP5G1P05496 136 aa7.24□□□□□ -1.25
SHKBP1-210ENST00000595874 LEPP41159 167 aa7.24□□□□□ -1.25
SHKBP1-210ENST00000595874 ATP5G3P48201 142 aa7.24□□□□□ -1.25
SHKBP1-210ENST00000595874 H2BFSP57053 126 aa7.24□□□□□ -1.25
SHKBP1-210ENST00000595874 CCDC28AQ8IWP9 274 aa7.24□□□□□ -1.25
SHKBP1-210ENST00000595874 RNF141Q8WVD5 230 aa7.24□□□□□ -1.25
SHKBP1-210ENST00000595874 PHYHIPLQ96FC7 376 aa7.24□□□□□ -1.25
SHKBP1-210ENST00000595874 VGLL1Q99990 258 aa7.24□□□□□ -1.25
SHKBP1-210ENST00000595874 SLC25A31Q9H0C2 315 aa7.24□□□□□ -1.25
SHKBP1-210ENST00000595874 TIMM8BQ9Y5J9 83 aaPredicted RBP7.24□□□□□ -1.25
SHKBP1-210ENST00000595874 NACAE9PAV3 2078 aa7.23□□□□□ -1.25
SHKBP1-210ENST00000595874 SNURFLB1AK76 121 aa7.23□□□□□ -1.25
SHKBP1-210ENST00000595874 NPIPB6E9PJ23 425 aa7.23□□□□□ -1.25
SHKBP1-210ENST00000595874 H7BYZ3 331 aa7.23□□□□□ -1.25
SHKBP1-210ENST00000595874 HIST1H1EP10412 219 aaKnown RBP7.23□□□□□ -1.25
SHKBP1-210ENST00000595874 TSPOP30536 169 aa7.23□□□□□ -1.25
SHKBP1-210ENST00000595874 OXA1LQ15070 435 aa7.23□□□□□ -1.25
SHKBP1-210ENST00000595874 FFAR4Q5NUL3 377 aa7.23□□□□□ -1.25
SHKBP1-210ENST00000595874 PRR9Q5T870 116 aa7.23□□□□□ -1.25
SHKBP1-210ENST00000595874 TMEM256Q8N2U0 113 aa7.23□□□□□ -1.25
SHKBP1-210ENST00000595874 Q8TAT8 98 aa7.23□□□□□ -1.25
SHKBP1-210ENST00000595874 RNASE8Q8TDE3 154 aaKnown RBP7.23□□□□□ -1.25
SHKBP1-210ENST00000595874 PPP1R1CQ8WVI7 109 aa7.23□□□□□ -1.25
SHKBP1-210ENST00000595874 NMES1Q9C002 83 aa7.23□□□□□ -1.25
SHKBP1-210ENST00000595874 WDR61Q9GZS3 305 aaKnown RBP7.23□□□□□ -1.25
SHKBP1-210ENST00000595874 AGPAT4-IT1Q9H0P7 198 aa7.23□□□□□ -1.25
SHKBP1-210ENST00000595874 TP53TG3Q9ULZ0 132 aa7.23□□□□□ -1.25
SHKBP1-210ENST00000595874 RNF24Q9Y225 148 aa7.23□□□□□ -1.25
SHKBP1-210ENST00000595874 CBY3A6NI87 242 aa7.22□□□□□ -1.25
SHKBP1-210ENST00000595874 HMGB3O15347 200 aaKnown RBP7.22□□□□□ -1.25
SHKBP1-210ENST00000595874 OR7C2O60412 319 aa7.22□□□□□ -1.25
SHKBP1-210ENST00000595874 IGHV3-53P01767 116 aa7.22□□□□□ -1.25
SHKBP1-210ENST00000595874 HOXA5P20719 270 aa7.22□□□□□ -1.25
SHKBP1-210ENST00000595874 GUK1Q16774 197 aa7.22□□□□□ -1.25
SHKBP1-210ENST00000595874 Q6ZTI0 123 aa7.22□□□□□ -1.25
SHKBP1-210ENST00000595874 TMEM263Q8WUH6 116 aaKnown RBP7.22□□□□□ -1.25
SHKBP1-210ENST00000595874 FAM167A-AS1Q96KT0 104 aa7.22□□□□□ -1.25
SHKBP1-210ENST00000595874 PAXXQ9BUH6 204 aa7.22□□□□□ -1.25
SHKBP1-210ENST00000595874 OR51M1Q9H341 326 aa7.22□□□□□ -1.25
SHKBP1-210ENST00000595874 TMPRSS5Q9H3S3 457 aa7.22□□□□□ -1.25
SHKBP1-210ENST00000595874 WFDC1Q9HC57 220 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms