RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 CEBPGP53567 150 aa11.18□□□□□ -0.62
DDX49-204ENST00000595858 FAM78BQ5VT40 261 aa11.18□□□□□ -0.62
DDX49-204ENST00000595858 Q8N1Y9 231 aa11.18□□□□□ -0.62
DDX49-204ENST00000595858 SEPSECSQ9HD40 501 aaKnown RBP11.18□□□□□ -0.62
DDX49-204ENST00000595858 NRN1Q9NPD7 142 aa11.18□□□□□ -0.62
DDX49-204ENST00000595858 SMAD5-AS1Q9Y6J3 95 aa11.18□□□□□ -0.62
DDX49-204ENST00000595858 TRAV5A0A0B4J249 113 aa11.17□□□□□ -0.62
DDX49-204ENST00000595858 MBP02144 154 aa11.17□□□□□ -0.62
DDX49-204ENST00000595858 RPL7P18124 248 aaKnown RBP11.17□□□□□ -0.62
DDX49-204ENST00000595858 CD81P60033 236 aa11.17□□□□□ -0.62
DDX49-204ENST00000595858 DCANP1Q8TF63 244 aa11.17□□□□□ -0.62
DDX49-204ENST00000595858 K7EIL1 84 aa11.17□□□□□ -0.62
DDX49-204ENST00000595858 K7EQG2 157 aa11.17□□□□□ -0.62
DDX49-204ENST00000595858 HOXA5P20719 270 aa11.17□□□□□ -0.62
DDX49-204ENST00000595858 ZNF726P1Q15940 193 aa11.17□□□□□ -0.62
DDX49-204ENST00000595858 ACOT6Q3I5F7 207 aaPredicted RBP11.17□□□□□ -0.62
DDX49-204ENST00000595858 DNAH3Q8TD57 4116 aa11.16□□□□□ -0.62
DDX49-204ENST00000595858 ZNF727A8MUV8 499 aa11.16□□□□□ -0.62
DDX49-204ENST00000595858 MRPS12O15235 138 aaKnown RBP11.16□□□□□ -0.62
DDX49-204ENST00000595858 SPATA31B1PQ5VZV4 182 aa11.16□□□□□ -0.62
DDX49-204ENST00000595858 BPIFA4PQ86YQ2 179 aa11.16□□□□□ -0.62
DDX49-204ENST00000595858 C17orf77Q96MU5 243 aa11.16□□□□□ -0.62
DDX49-204ENST00000595858 CTDSP1Q9GZU7 261 aa11.16□□□□□ -0.62
DDX49-204ENST00000595858 C19orf73Q9NVV2 129 aa11.16□□□□□ -0.62
DDX49-204ENST00000595858 MAP1LC3B2A6NCE7 125 aa11.15□□□□□ -0.62
DDX49-204ENST00000595858 LCN15Q6UWW0 184 aa11.15□□□□□ -0.62
DDX49-204ENST00000595858 MIR17HGQ75NE6 70 aa11.15□□□□□ -0.62
DDX49-204ENST00000595858 MRPL32Q9BYC8 188 aaKnown RBP11.15□□□□□ -0.62
DDX49-204ENST00000595858 MAP1LC3BQ9GZQ8 125 aa11.15□□□□□ -0.62
DDX49-204ENST00000595858 SDF2L1Q9HCN8 221 aa11.15□□□□□ -0.62
DDX49-204ENST00000595858 FUT9Q9Y231 359 aa11.15□□□□□ -0.62
DDX49-204ENST00000595858 S100PP25815 95 aa11.15□□□□□ -0.63
DDX49-204ENST00000595858 RHOBP62745 196 aa11.15□□□□□ -0.63
DDX49-204ENST00000595858 ODF3L2Q3SX64 289 aa11.15□□□□□ -0.63
DDX49-204ENST00000595858 OR51M1Q9H341 326 aa11.15□□□□□ -0.63
DDX49-204ENST00000595858 OR11H12B2RN74 326 aa11.14□□□□□ -0.63
DDX49-204ENST00000595858 ZNF674Q2M3X9 581 aa11.14□□□□□ -0.63
DDX49-204ENST00000595858 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.14□□□□□ -0.63
DDX49-204ENST00000595858 OR10G9Q8NGN4 311 aa11.14□□□□□ -0.63
DDX49-204ENST00000595858 OR10G7Q8NGN6 311 aa11.14□□□□□ -0.63
DDX49-204ENST00000595858 FAM167A-AS1Q96KT0 104 aa11.14□□□□□ -0.63
DDX49-204ENST00000595858 FAM110AQ9BQ89 295 aa11.14□□□□□ -0.63
DDX49-204ENST00000595858 CXCL1P09341 107 aa11.13□□□□□ -0.63
DDX49-204ENST00000595858 CMC4P56277 68 aaPredicted RBP11.13□□□□□ -0.63
DDX49-204ENST00000595858 SLC25A2Q9BXI2 301 aa11.13□□□□□ -0.63
DDX49-204ENST00000595858 WFDC10AQ9H1F0 79 aa11.13□□□□□ -0.63
DDX49-204ENST00000595858 NIT2Q9NQR4 276 aa11.13□□□□□ -0.63
DDX49-204ENST00000595858 TRBV24-1A0A075B6N3 115 aa11.12□□□□□ -0.63
DDX49-204ENST00000595858 A0A087X0K7 114 aa11.12□□□□□ -0.63
DDX49-204ENST00000595858 CTXND1A0A1B0GTU2 59 aa11.12□□□□□ -0.63
DDX49-204ENST00000595858 A0A1W2PPV4 95 aa11.12□□□□□ -0.63
DDX49-204ENST00000595858 TMEM250H0YL14 139 aa11.12□□□□□ -0.63
DDX49-204ENST00000595858 SOCS3O14543 225 aa11.12□□□□□ -0.63
DDX49-204ENST00000595858 SNRPCP09234 159 aaKnown RBP11.12□□□□□ -0.63
DDX49-204ENST00000595858 ZNF688P0C7X2 276 aa11.12□□□□□ -0.63
DDX49-204ENST00000595858 MEF2BQ02080 365 aaPredicted RBP11.12□□□□□ -0.63
DDX49-204ENST00000595858 DEFB121Q5J5C9 76 aa11.12□□□□□ -0.63
DDX49-204ENST00000595858 RPP25LQ8N5L8 163 aaKnown RBP11.12□□□□□ -0.63
DDX49-204ENST00000595858 DEFB125Q8N687 156 aa11.12□□□□□ -0.63
DDX49-204ENST00000595858 MRAPQ8TCY5 172 aa11.12□□□□□ -0.63
DDX49-204ENST00000595858 MAP6D1Q9H9H5 199 aa11.12□□□□□ -0.63
DDX49-204ENST00000595858 MANBALQ9NQG1 85 aa11.12□□□□□ -0.63
DDX49-204ENST00000595858 GSN-AS1Q9NRJ2 163 aa11.12□□□□□ -0.63
DDX49-204ENST00000595858 TMEM14CQ9P0S9 112 aa11.12□□□□□ -0.63
DDX49-204ENST00000595858 NAT8Q9UHE5 227 aa11.12□□□□□ -0.63
DDX49-204ENST00000595858 IGLC2P0DOY2 106 aa11.12□□□□□ -0.63
DDX49-204ENST00000595858 PSMB3P49720 205 aa11.12□□□□□ -0.63
DDX49-204ENST00000595858 FGF8P55075 233 aaPredicted RBP11.12□□□□□ -0.63
DDX49-204ENST00000595858 DEFB131AP59861 70 aa11.12□□□□□ -0.63
DDX49-204ENST00000595858 SNRPD3P62318 126 aaKnown RBP11.12□□□□□ -0.63
DDX49-204ENST00000595858 SSX7Q7RTT5 188 aa11.12□□□□□ -0.63
DDX49-204ENST00000595858 FAM210BQ96KR6 192 aa11.12□□□□□ -0.63
DDX49-204ENST00000595858 TGIF2-C20orf24A0A0A6YYL0 155 aa11.11□□□□□ -0.63
DDX49-204ENST00000595858 IGHV4-30-4P0DP06 118 aa11.11□□□□□ -0.63
DDX49-204ENST00000595858 PYYP10082 97 aa11.11□□□□□ -0.63
DDX49-204ENST00000595858 ID1P41134 155 aa11.11□□□□□ -0.63
DDX49-204ENST00000595858 TAS2R45P59539 299 aa11.11□□□□□ -0.63
DDX49-204ENST00000595858 SAMD13Q5VXD3 122 aa11.11□□□□□ -0.63
DDX49-204ENST00000595858 C16orf92Q96LL3 132 aa11.11□□□□□ -0.63
DDX49-204ENST00000595858 ACTR3CQ9C0K3 210 aaPredicted RBP11.11□□□□□ -0.63
DDX49-204ENST00000595858 URGCP-MRPS24S4R325 110 aa11.11□□□□□ -0.63
DDX49-204ENST00000595858 FBN3Q75N90 2809 aa11.11□□□□□ -0.63
DDX49-204ENST00000595858 ISLRO14498 428 aa11.1□□□□□ -0.63
DDX49-204ENST00000595858 HIST1H1EP10412 219 aaKnown RBP11.1□□□□□ -0.63
DDX49-204ENST00000595858 S100A2P29034 98 aa11.1□□□□□ -0.63
DDX49-204ENST00000595858 CDC34P49427 236 aaPredicted RBP11.1□□□□□ -0.63
DDX49-204ENST00000595858 APRG1Q8IVJ8 170 aa11.1□□□□□ -0.63
DDX49-204ENST00000595858 ZNF586Q9NXT0 402 aa11.1□□□□□ -0.63
DDX49-204ENST00000595858 H3BTX0 84 aa11.1□□□□□ -0.63
DDX49-204ENST00000595858 HIST1H2BKO60814 126 aa11.1□□□□□ -0.63
DDX49-204ENST00000595858 HIST1H2BJP06899 126 aa11.1□□□□□ -0.63
DDX49-204ENST00000595858 HIST1H2BOP23527 126 aa11.1□□□□□ -0.63
DDX49-204ENST00000595858 HIST1H2BBP33778 126 aa11.1□□□□□ -0.63
DDX49-204ENST00000595858 NDUFA6P56556 154 aa11.1□□□□□ -0.63
DDX49-204ENST00000595858 HIST1H2BDP58876 126 aa11.1□□□□□ -0.63
DDX49-204ENST00000595858 HIST1H2BCP62807 126 aa11.1□□□□□ -0.63
DDX49-204ENST00000595858 HIST2H2BEQ16778 126 aa11.1□□□□□ -0.63
DDX49-204ENST00000595858 TMEM241Q24JQ0 296 aa11.1□□□□□ -0.63
DDX49-204ENST00000595858 PSMG4Q5JS54 123 aa11.1□□□□□ -0.63
DDX49-204ENST00000595858 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms