RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 ADAMTSL5Q6ZMM2 481 aa9.86□□□□□ -0.83
SHKBP1-209ENST00000595803 RBPMS2Q6ZRY4 209 aaKnown RBP9.86□□□□□ -0.83
SHKBP1-209ENST00000595803 GBGT1Q8N5D6 347 aa9.86□□□□□ -0.83
SHKBP1-209ENST00000595803 C5orf17Q8NAS9 161 aa9.86□□□□□ -0.83
SHKBP1-209ENST00000595803 HIST1H2BAQ96A08 127 aa9.86□□□□□ -0.83
SHKBP1-209ENST00000595803 RPUSD4Q96CM3 377 aaKnown RBP9.86□□□□□ -0.83
SHKBP1-209ENST00000595803 RPH3ALQ9UNE2 315 aa9.86□□□□□ -0.83
SHKBP1-209ENST00000595803 TENM3Q9P273 2699 aa9.85□□□□□ -0.83
SHKBP1-209ENST00000595803 AKR1C3P42330 323 aa9.85□□□□□ -0.83
SHKBP1-209ENST00000595803 DEFB114Q30KQ6 69 aa9.85□□□□□ -0.83
SHKBP1-209ENST00000595803 FAM74A3Q4VXF1 159 aa9.85□□□□□ -0.83
SHKBP1-209ENST00000595803 SAMD13Q5VXD3 122 aa9.85□□□□□ -0.83
SHKBP1-209ENST00000595803 IGFL4Q6B9Z1 124 aa9.85□□□□□ -0.83
SHKBP1-209ENST00000595803 C11orf52Q96A22 123 aa9.85□□□□□ -0.83
SHKBP1-209ENST00000595803 LINC00052Q96N35 136 aa9.85□□□□□ -0.83
SHKBP1-209ENST00000595803 SEC11CQ9BY50 192 aa9.85□□□□□ -0.83
SHKBP1-209ENST00000595803 SIGLEC8Q9NYZ4 499 aa9.85□□□□□ -0.83
SHKBP1-209ENST00000595803 ZNF727A8MUV8 499 aa9.84□□□□□ -0.83
SHKBP1-209ENST00000595803 K7EQM0 130 aa9.84□□□□□ -0.83
SHKBP1-209ENST00000595803 PEX7O00628 323 aa9.84□□□□□ -0.83
SHKBP1-209ENST00000595803 TFPI2P48307 235 aa9.84□□□□□ -0.83
SHKBP1-209ENST00000595803 CNN1P51911 297 aaKnown RBP9.84□□□□□ -0.83
SHKBP1-209ENST00000595803 GNG5P63218 68 aa9.84□□□□□ -0.83
SHKBP1-209ENST00000595803 LCN12Q6JVE5 192 aa9.84□□□□□ -0.83
SHKBP1-209ENST00000595803 ARL6IP6Q8N6S5 226 aa9.84□□□□□ -0.83
SHKBP1-209ENST00000595803 MS4A6AQ9H2W1 248 aa9.84□□□□□ -0.83
SHKBP1-209ENST00000595803 TRAV8-2A0A0B4J237 113 aa9.83□□□□□ -0.84
SHKBP1-209ENST00000595803 TRAV25A0A0B4J276 109 aa9.83□□□□□ -0.84
SHKBP1-209ENST00000595803 SAP30O75446 220 aa9.83□□□□□ -0.84
SHKBP1-209ENST00000595803 TCRAP04437 139 aa9.83□□□□□ -0.84
SHKBP1-209ENST00000595803 S100A9P06702 114 aaKnown RBP9.83□□□□□ -0.84
SHKBP1-209ENST00000595803 HLA-DMBP28068 263 aa9.83□□□□□ -0.84
SHKBP1-209ENST00000595803 PSG3Q16557 428 aa9.83□□□□□ -0.84
SHKBP1-209ENST00000595803 LINC00482Q8N8I6 264 aa9.83□□□□□ -0.84
SHKBP1-209ENST00000595803 ATG101Q9BSB4 218 aa9.83□□□□□ -0.84
SHKBP1-209ENST00000595803 PARLQ9H300 379 aa9.83□□□□□ -0.84
SHKBP1-209ENST00000595803 DIRC3C9JPN6 131 aa9.82□□□□□ -0.84
SHKBP1-209ENST00000595803 M0R3E3 92 aa9.82□□□□□ -0.84
SHKBP1-209ENST00000595803 ISLRO14498 428 aa9.82□□□□□ -0.84
SHKBP1-209ENST00000595803 SOCS3O14543 225 aa9.82□□□□□ -0.84
SHKBP1-209ENST00000595803 APOC3P02656 99 aa9.82□□□□□ -0.84
SHKBP1-209ENST00000595803 TAS2R60P59551 318 aa9.82□□□□□ -0.84
SHKBP1-209ENST00000595803 UBE2G1P62253 170 aa9.82□□□□□ -0.84
SHKBP1-209ENST00000595803 TMEM241Q24JQ0 296 aa9.82□□□□□ -0.84
SHKBP1-209ENST00000595803 C10orf91Q5T1B1 145 aa9.82□□□□□ -0.84
SHKBP1-209ENST00000595803 GOLT1AQ6ZVE7 132 aa9.82□□□□□ -0.84
SHKBP1-209ENST00000595803 RNF182Q8N6D2 247 aa9.82□□□□□ -0.84
SHKBP1-209ENST00000595803 MRPL53Q96EL3 112 aaKnown RBP9.82□□□□□ -0.84
SHKBP1-209ENST00000595803 SMIM7Q9BQ49 75 aa9.82□□□□□ -0.84
SHKBP1-209ENST00000595803 BIRC6Q9NR09 4857 aa9.81□□□□□ -0.84
SHKBP1-209ENST00000595803 TRAV2A0A0B4J234 112 aa9.81□□□□□ -0.84
SHKBP1-209ENST00000595803 SERTM2A0A1B0GWG4 89 aa9.81□□□□□ -0.84
SHKBP1-209ENST00000595803 ZNF705FA8MVS1 300 aaPredicted RBP9.81□□□□□ -0.84
SHKBP1-209ENST00000595803 K7EQG2 157 aa9.81□□□□□ -0.84
SHKBP1-209ENST00000595803 TSPAN4O14817 238 aa9.81□□□□□ -0.84
SHKBP1-209ENST00000595803 ADCYAP1P18509 176 aa9.81□□□□□ -0.84
SHKBP1-209ENST00000595803 RPL35P42766 123 aaKnown RBP9.81□□□□□ -0.84
SHKBP1-209ENST00000595803 CD300EQ496F6 205 aaPredicted RBP9.81□□□□□ -0.84
SHKBP1-209ENST00000595803 ZNF738Q8NE65 137 aa9.81□□□□□ -0.84
SHKBP1-209ENST00000595803 C2CD4CQ8TF44 421 aa9.81□□□□□ -0.84
SHKBP1-209ENST00000595803 NIPSNAP3BQ9BS92 247 aa9.81□□□□□ -0.84
SHKBP1-209ENST00000595803 CARHSP1Q9Y2V2 147 aaKnown RBP9.81□□□□□ -0.84
SHKBP1-209ENST00000595803 TRAV34A0A0B4J273 112 aa9.8□□□□□ -0.84
SHKBP1-209ENST00000595803 CD33P20138 364 aa9.8□□□□□ -0.84
SHKBP1-209ENST00000595803 SNRPD3P62318 126 aaKnown RBP9.8□□□□□ -0.84
SHKBP1-209ENST00000595803 GUCA2BQ16661 112 aa9.8□□□□□ -0.84
SHKBP1-209ENST00000595803 TMEM183BQ1AE95 376 aa9.8□□□□□ -0.84
SHKBP1-209ENST00000595803 TMEM61Q8N0U2 210 aa9.8□□□□□ -0.84
SHKBP1-209ENST00000595803 OR2K2Q8NGT1 345 aa9.8□□□□□ -0.84
SHKBP1-209ENST00000595803 DCANP1Q8TF63 244 aa9.8□□□□□ -0.84
SHKBP1-209ENST00000595803 TVP23CQ96ET8 276 aa9.8□□□□□ -0.84
SHKBP1-209ENST00000595803 C20orf173Q96LM9 149 aa9.8□□□□□ -0.84
SHKBP1-209ENST00000595803 LINC00479Q96M42 142 aa9.8□□□□□ -0.84
SHKBP1-209ENST00000595803 DERL1Q9BUN8 251 aa9.8□□□□□ -0.84
SHKBP1-209ENST00000595803 NAT8Q9UHE5 227 aa9.8□□□□□ -0.84
SHKBP1-209ENST00000595803 EPPK1P58107 5090 aaKnown RBP9.79□□□□□ -0.84
SHKBP1-209ENST00000595803 OR4C46A6NHA9 309 aa9.79□□□□□ -0.84
SHKBP1-209ENST00000595803 BAGE2Q86Y30 109 aa9.79□□□□□ -0.84
SHKBP1-209ENST00000595803 FMC1Q96HJ9 113 aa9.79□□□□□ -0.84
SHKBP1-209ENST00000595803 SGK494Q96LW2 274 aa9.79□□□□□ -0.84
SHKBP1-209ENST00000595803 SPAG8Q99932 426 aaPredicted RBP9.79□□□□□ -0.84
SHKBP1-209ENST00000595803 MCRIP2Q9BUT9 160 aaKnown RBP9.79□□□□□ -0.84
SHKBP1-209ENST00000595803 PSG8Q9UQ74 426 aa9.79□□□□□ -0.84
SHKBP1-209ENST00000595803 KLF12Q9Y4X4 402 aa9.79□□□□□ -0.84
SHKBP1-209ENST00000595803 FBLL1A6NHQ2 334 aaKnown RBP9.78□□□□□ -0.84
SHKBP1-209ENST00000595803 C9JCJ5 164 aa9.78□□□□□ -0.84
SHKBP1-209ENST00000595803 PRAC2D3DTV9 90 aa9.78□□□□□ -0.84
SHKBP1-209ENST00000595803 M0R036 132 aa9.78□□□□□ -0.84
SHKBP1-209ENST00000595803 PRB2P02812 416 aaPredicted RBP9.78□□□□□ -0.84
SHKBP1-209ENST00000595803 ZNF688P0C7X2 276 aa9.78□□□□□ -0.84
SHKBP1-209ENST00000595803 PRB4P10163 310 aaPredicted RBP9.78□□□□□ -0.84
SHKBP1-209ENST00000595803 GNG4P50150 75 aa9.78□□□□□ -0.84
SHKBP1-209ENST00000595803 CMC4P56277 68 aaPredicted RBP9.78□□□□□ -0.84
SHKBP1-209ENST00000595803 C9orf66Q5T8R8 295 aa9.78□□□□□ -0.84
SHKBP1-209ENST00000595803 PRNTQ86SH4 94 aa9.78□□□□□ -0.84
SHKBP1-209ENST00000595803 SVBPQ8N300 66 aa9.78□□□□□ -0.84
SHKBP1-209ENST00000595803 TMEM75Q8N9X5 138 aa9.78□□□□□ -0.84
SHKBP1-209ENST00000595803 OR10J6PQ8NGY7 276 aa9.78□□□□□ -0.84
SHKBP1-209ENST00000595803 SDF2L1Q9HCN8 221 aa9.78□□□□□ -0.84
SHKBP1-209ENST00000595803 IGKV2-40A0A087WW87 121 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms