RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 IMMP2LQ96T52 175 aa9.68□□□□□ -0.86
SCAF1-202ENST00000595242 ELOVL1Q9BW60 279 aa9.68□□□□□ -0.86
SCAF1-202ENST00000595242 SLC25A39Q9BZJ4 359 aaPredicted RBP9.68□□□□□ -0.86
SCAF1-202ENST00000595242 CRYBB3P26998 211 aa9.67□□□□□ -0.86
SCAF1-202ENST00000595242 RPL35P42766 123 aaKnown RBP9.67□□□□□ -0.86
SCAF1-202ENST00000595242 TAS2R60P59551 318 aa9.67□□□□□ -0.86
SCAF1-202ENST00000595242 SUMO1P63165 101 aaKnown RBP9.67□□□□□ -0.86
SCAF1-202ENST00000595242 ZNF502Q8TBZ5 544 aa9.67□□□□□ -0.86
SCAF1-202ENST00000595242 IGF2BP2-AS1Q96M15 143 aa9.67□□□□□ -0.86
SCAF1-202ENST00000595242 FBXL7Q9UJT9 491 aa9.67□□□□□ -0.86
SCAF1-202ENST00000595242 ZNF580Q9UK33 172 aa9.67□□□□□ -0.86
SCAF1-202ENST00000595242 GGCTO75223 188 aaKnown RBP9.66□□□□□ -0.86
SCAF1-202ENST00000595242 OR2J3O76001 311 aa9.66□□□□□ -0.86
SCAF1-202ENST00000595242 IGF1P05019 195 aa9.66□□□□□ -0.86
SCAF1-202ENST00000595242 NBEAP1P0C6P0 100 aa9.66□□□□□ -0.86
SCAF1-202ENST00000595242 HIST1H1EP10412 219 aaKnown RBP9.66□□□□□ -0.86
SCAF1-202ENST00000595242 OR5T1Q8NG75 326 aa9.66□□□□□ -0.86
SCAF1-202ENST00000595242 OCC1Q8TAD7 63 aa9.66□□□□□ -0.86
SCAF1-202ENST00000595242 ZNF414Q96IQ9 312 aa9.66□□□□□ -0.86
SCAF1-202ENST00000595242 RNF24Q9Y225 148 aa9.66□□□□□ -0.86
SCAF1-202ENST00000595242 TGIF2-C20orf24A0A0A6YYL0 155 aa9.65□□□□□ -0.86
SCAF1-202ENST00000595242 HELTA6NFD8 242 aa9.65□□□□□ -0.86
SCAF1-202ENST00000595242 LINC01619G3V211 115 aa9.65□□□□□ -0.86
SCAF1-202ENST00000595242 H3BUA1 57 aa9.65□□□□□ -0.86
SCAF1-202ENST00000595242 K7EN84 100 aa9.65□□□□□ -0.86
SCAF1-202ENST00000595242 MRPS12O15235 138 aaKnown RBP9.65□□□□□ -0.86
SCAF1-202ENST00000595242 CTSGP08311 255 aa9.65□□□□□ -0.86
SCAF1-202ENST00000595242 S100PP25815 95 aa9.65□□□□□ -0.86
SCAF1-202ENST00000595242 GALR1P47211 349 aa9.65□□□□□ -0.86
SCAF1-202ENST00000595242 ECSCRQ19T08 205 aa9.65□□□□□ -0.86
SCAF1-202ENST00000595242 Q56UQ5 140 aa9.65□□□□□ -0.86
SCAF1-202ENST00000595242 CENPWQ5EE01 88 aa9.65□□□□□ -0.86
SCAF1-202ENST00000595242 ZNF600Q6ZNG1 722 aa9.65□□□□□ -0.86
SCAF1-202ENST00000595242 NECAP1Q8NC96 275 aa9.65□□□□□ -0.86
SCAF1-202ENST00000595242 SMIM12Q96EX1 92 aa9.65□□□□□ -0.86
SCAF1-202ENST00000595242 SFRP2Q96HF1 295 aa9.65□□□□□ -0.86
SCAF1-202ENST00000595242 BTF3L4Q96K17 158 aa9.65□□□□□ -0.86
SCAF1-202ENST00000595242 FAM210BQ96KR6 192 aa9.65□□□□□ -0.86
SCAF1-202ENST00000595242 PKHD1P08F94 4074 aa9.65□□□□□ -0.86
SCAF1-202ENST00000595242 VPS13DQ5THJ4 4388 aa9.64□□□□□ -0.87
SCAF1-202ENST00000595242 TRAV9-1A0A075B6T8 112 aa9.64□□□□□ -0.87
SCAF1-202ENST00000595242 TRAV41A0A0B4J266 112 aa9.64□□□□□ -0.87
SCAF1-202ENST00000595242 PGPEP1LA6NFU8 196 aa9.64□□□□□ -0.87
SCAF1-202ENST00000595242 FAM223BA6NKX1 122 aa9.64□□□□□ -0.87
SCAF1-202ENST00000595242 PEX7O00628 323 aa9.64□□□□□ -0.87
SCAF1-202ENST00000595242 GCGP01275 180 aa9.64□□□□□ -0.87
SCAF1-202ENST00000595242 IGLV1-51P01701 117 aa9.64□□□□□ -0.87
SCAF1-202ENST00000595242 IGLV2-8P01709 118 aa9.64□□□□□ -0.87
SCAF1-202ENST00000595242 TYMSP04818 313 aa9.64□□□□□ -0.87
SCAF1-202ENST00000595242 IL4P05112 153 aa9.64□□□□□ -0.87
SCAF1-202ENST00000595242 IGLC2P0DOY2 106 aa9.64□□□□□ -0.87
SCAF1-202ENST00000595242 PPIFP30405 207 aaKnown RBP9.64□□□□□ -0.87
SCAF1-202ENST00000595242 GNG4P50150 75 aa9.64□□□□□ -0.87
SCAF1-202ENST00000595242 RAB9AP51151 201 aa9.64□□□□□ -0.87
SCAF1-202ENST00000595242 CNN1P51911 297 aaKnown RBP9.64□□□□□ -0.87
SCAF1-202ENST00000595242 USF2Q15853 346 aaPredicted RBP9.64□□□□□ -0.87
SCAF1-202ENST00000595242 BPIFA4PQ86YQ2 179 aa9.64□□□□□ -0.87
SCAF1-202ENST00000595242 FAM223AQ8IWN6 122 aa9.64□□□□□ -0.87
SCAF1-202ENST00000595242 C5orf17Q8NAS9 161 aa9.64□□□□□ -0.87
SCAF1-202ENST00000595242 BIN3Q9NQY0 253 aa9.64□□□□□ -0.87
SCAF1-202ENST00000595242 KLF12Q9Y4X4 402 aa9.64□□□□□ -0.87
SCAF1-202ENST00000595242 URGCP-MRPS24S4R325 110 aa9.64□□□□□ -0.87
SCAF1-202ENST00000595242 IGHV4OR15-8A0A075B7B6 117 aa9.63□□□□□ -0.87
SCAF1-202ENST00000595242 A0A087WW49 117 aa9.63□□□□□ -0.87
SCAF1-202ENST00000595242 TRBV7-1A0A0A6YYK4 115 aa9.63□□□□□ -0.87
SCAF1-202ENST00000595242 G3V318 75 aa9.63□□□□□ -0.87
SCAF1-202ENST00000595242 IGLV1-40P01703 118 aa9.63□□□□□ -0.87
SCAF1-202ENST00000595242 S100A9P06702 114 aaKnown RBP9.63□□□□□ -0.87
SCAF1-202ENST00000595242 S100A7P31151 101 aa9.63□□□□□ -0.87
SCAF1-202ENST00000595242 ADMP35318 185 aa9.63□□□□□ -0.87
SCAF1-202ENST00000595242 RPS10P46783 165 aaKnown RBP9.63□□□□□ -0.87
SCAF1-202ENST00000595242 RHOGP84095 191 aa9.63□□□□□ -0.87
SCAF1-202ENST00000595242 TMEM183BQ1AE95 376 aa9.63□□□□□ -0.87
SCAF1-202ENST00000595242 KCNIP4Q6PIL6 250 aa9.63□□□□□ -0.87
SCAF1-202ENST00000595242 LYPD1Q8N2G4 141 aa9.63□□□□□ -0.87
SCAF1-202ENST00000595242 OR10G8Q8NGN5 311 aa9.63□□□□□ -0.87
SCAF1-202ENST00000595242 SRD5A3Q9H8P0 318 aa9.63□□□□□ -0.87
SCAF1-202ENST00000595242 OTORQ9NRC9 128 aa9.63□□□□□ -0.87
SCAF1-202ENST00000595242 OSTCQ9NRP0 149 aa9.63□□□□□ -0.87
SCAF1-202ENST00000595242 ZNF586Q9NXT0 402 aa9.63□□□□□ -0.87
SCAF1-202ENST00000595242 EPDR1Q9UM22 224 aa9.63□□□□□ -0.87
SCAF1-202ENST00000595242 TRBV6-1A0A0K0K1D8 114 aa9.62□□□□□ -0.87
SCAF1-202ENST00000595242 PDE6HQ13956 83 aa9.62□□□□□ -0.87
SCAF1-202ENST00000595242 C15orf32Q32M92 178 aa9.62□□□□□ -0.87
SCAF1-202ENST00000595242 LEMD1Q68G75 181 aa9.62□□□□□ -0.87
SCAF1-202ENST00000595242 EEF1AKMT3Q96AZ1 226 aa9.62□□□□□ -0.87
SCAF1-202ENST00000595242 CCDC140Q96MF4 163 aa9.62□□□□□ -0.87
SCAF1-202ENST00000595242 ATG101Q9BSB4 218 aa9.62□□□□□ -0.87
SCAF1-202ENST00000595242 Q9H3A6 140 aa9.62□□□□□ -0.87
SCAF1-202ENST00000595242 S4R3C0 116 aa9.62□□□□□ -0.87
SCAF1-202ENST00000595242 TRBV19A0A075B6N1 114 aa9.61□□□□□ -0.87
SCAF1-202ENST00000595242 ZNF98A6NK75 572 aa9.61□□□□□ -0.87
SCAF1-202ENST00000595242 ISLRO14498 428 aa9.61□□□□□ -0.87
SCAF1-202ENST00000595242 PHOX2AO14813 284 aa9.61□□□□□ -0.87
SCAF1-202ENST00000595242 SLC25A5P05141 298 aaKnown RBP9.61□□□□□ -0.87
SCAF1-202ENST00000595242 FAM231DQ6ZW35 169 aa9.61□□□□□ -0.87
SCAF1-202ENST00000595242 GTSCR1Q86UQ5 136 aa9.61□□□□□ -0.87
SCAF1-202ENST00000595242 ARL6IP6Q8N6S5 226 aa9.61□□□□□ -0.87
SCAF1-202ENST00000595242 CHRDL1Q9BU40 450 aa9.61□□□□□ -0.87
SCAF1-202ENST00000595242 ZFAND3Q9H8U3 227 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms