RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 PLAC8L1A1L4L8 177 aa16.6■□□□□ 0.25
LSM4-204ENST00000594828 RLN2P04090 185 aa16.6■□□□□ 0.25
LSM4-204ENST00000594828 FCN2Q15485 313 aa16.6■□□□□ 0.25
LSM4-204ENST00000594828 A6NHS1 94 aa16.59■□□□□ 0.25
LSM4-204ENST00000594828 MPDU1O75352 247 aa16.59■□□□□ 0.25
LSM4-204ENST00000594828 SIX6O95475 246 aa16.59■□□□□ 0.25
LSM4-204ENST00000594828 C16orf74Q96GX8 76 aa16.59■□□□□ 0.25
LSM4-204ENST00000594828 ZNF586Q9NXT0 402 aa16.59■□□□□ 0.25
LSM4-204ENST00000594828 H7BYZ3 331 aa16.58■□□□□ 0.24
LSM4-204ENST00000594828 M0R2N4 97 aa16.58■□□□□ 0.24
LSM4-204ENST00000594828 IFITM3Q01628 133 aa16.58■□□□□ 0.24
LSM4-204ENST00000594828 NHLH2Q02577 135 aa16.58■□□□□ 0.24
LSM4-204ENST00000594828 C20orf144Q9BQM9 153 aa16.58■□□□□ 0.24
LSM4-204ENST00000594828 PARD6GQ9BYG4 376 aaPredicted RBP16.58■□□□□ 0.24
LSM4-204ENST00000594828 NMES1Q9C002 83 aa16.58■□□□□ 0.24
LSM4-204ENST00000594828 KIR3DS1Q14943 382 aa16.57■□□□□ 0.24
LSM4-204ENST00000594828 RNF212Q495C1 297 aa16.57■□□□□ 0.24
LSM4-204ENST00000594828 ZNF493Q6ZR52 646 aa16.57■□□□□ 0.24
LSM4-204ENST00000594828 LINC00336Q6ZUF6 198 aa16.57■□□□□ 0.24
LSM4-204ENST00000594828 SLC25A31Q9H0C2 315 aa16.57■□□□□ 0.24
LSM4-204ENST00000594828 TIMM8BQ9Y5J9 83 aaPredicted RBP16.57■□□□□ 0.24
LSM4-204ENST00000594828 E5RGE8 158 aa16.56■□□□□ 0.24
LSM4-204ENST00000594828 INMT-MINDY4F8WBC2 141 aa16.56■□□□□ 0.24
LSM4-204ENST00000594828 PRAF2O60831 178 aa16.56■□□□□ 0.24
LSM4-204ENST00000594828 ZNF253O75346 499 aa16.56■□□□□ 0.24
LSM4-204ENST00000594828 C15orf53Q8NAA6 179 aa16.56■□□□□ 0.24
LSM4-204ENST00000594828 OR5C1Q8NGR4 320 aa16.56■□□□□ 0.24
LSM4-204ENST00000594828 NPCDR1Q9BY65 106 aa16.56■□□□□ 0.24
LSM4-204ENST00000594828 PTTG2Q9NZH5 202 aa16.56■□□□□ 0.24
LSM4-204ENST00000594828 TMEM14CQ9P0S9 112 aa16.56■□□□□ 0.24
LSM4-204ENST00000594828 TRBV19A0A075B6N1 114 aa16.55■□□□□ 0.24
LSM4-204ENST00000594828 CBY3A6NI87 242 aa16.55■□□□□ 0.24
LSM4-204ENST00000594828 F5H768 121 aa16.55■□□□□ 0.24
LSM4-204ENST00000594828 CYCSP99999 105 aaKnown RBP16.55■□□□□ 0.24
LSM4-204ENST00000594828 LGALS9BQ3B8N2 356 aa16.55■□□□□ 0.24
LSM4-204ENST00000594828 LRRC37A5PQ49AS3 106 aa16.55■□□□□ 0.24
LSM4-204ENST00000594828 GFI1BQ5VTD9 330 aa16.55■□□□□ 0.24
LSM4-204ENST00000594828 TMEM263Q8WUH6 116 aaKnown RBP16.55■□□□□ 0.24
LSM4-204ENST00000594828 OR5AC2Q9NZP5 309 aa16.55■□□□□ 0.24
LSM4-204ENST00000594828 ATP5G1P05496 136 aa16.54■□□□□ 0.24
LSM4-204ENST00000594828 CT45A10P0DMU9 189 aa16.54■□□□□ 0.24
LSM4-204ENST00000594828 HIST1H1EP10412 219 aaKnown RBP16.54■□□□□ 0.24
LSM4-204ENST00000594828 ATP5G3P48201 142 aa16.54■□□□□ 0.24
LSM4-204ENST00000594828 THAP6Q8TBB0 222 aa16.54■□□□□ 0.24
LSM4-204ENST00000594828 RNASE8Q8TDE3 154 aaKnown RBP16.54■□□□□ 0.24
LSM4-204ENST00000594828 NOP10Q9NPE3 64 aaKnown RBP16.54■□□□□ 0.24
LSM4-204ENST00000594828 IGLV2-18A0A075B6J9 118 aa16.53■□□□□ 0.24
LSM4-204ENST00000594828 NPIPB6E9PJ23 425 aa16.53■□□□□ 0.24
LSM4-204ENST00000594828 J3KRW8 73 aa16.53■□□□□ 0.24
LSM4-204ENST00000594828 LEPP41159 167 aa16.53■□□□□ 0.24
LSM4-204ENST00000594828 GCSAMLQ5JQS6 135 aa16.53■□□□□ 0.24
LSM4-204ENST00000594828 CCDC28AQ8IWP9 274 aa16.53■□□□□ 0.24
LSM4-204ENST00000594828 MRPL53Q96EL3 112 aaKnown RBP16.53■□□□□ 0.24
LSM4-204ENST00000594828 ODF3Q96PU9 254 aa16.53■□□□□ 0.24
LSM4-204ENST00000594828 TIMM9Q9Y5J7 89 aa16.53■□□□□ 0.24
LSM4-204ENST00000594828 H0YIZ8 118 aa16.52■□□□□ 0.24
LSM4-204ENST00000594828 PYYP10082 97 aa16.52■□□□□ 0.24
LSM4-204ENST00000594828 MARVELD1Q9BSK0 173 aa16.52■□□□□ 0.24
LSM4-204ENST00000594828 PRELID1Q9Y255 219 aa16.52■□□□□ 0.24
LSM4-204ENST00000594828 M0R3E3 92 aa16.51■□□□□ 0.23
LSM4-204ENST00000594828 NDUFB4O95168 129 aa16.51■□□□□ 0.23
LSM4-204ENST00000594828 PDE6HQ13956 83 aa16.51■□□□□ 0.23
LSM4-204ENST00000594828 CLINT1Q14677 625 aa16.51■□□□□ 0.23
LSM4-204ENST00000594828 BLNKQ8WV28 456 aa16.51■□□□□ 0.23
LSM4-204ENST00000594828 TRAV12-3A0A0B4J271 114 aa16.5■□□□□ 0.23
LSM4-204ENST00000594828 RTL8CO15255 209 aa16.49■□□□□ 0.23
LSM4-204ENST00000594828 H2BFSP57053 126 aa16.49■□□□□ 0.23
LSM4-204ENST00000594828 Q6ZR54 194 aa16.49■□□□□ 0.23
LSM4-204ENST00000594828 EXOC3-AS1Q8N2X6 119 aa16.49■□□□□ 0.23
LSM4-204ENST00000594828 ATG101Q9BSB4 218 aa16.49■□□□□ 0.23
LSM4-204ENST00000594828 SLC25A2Q9BXI2 301 aa16.49■□□□□ 0.23
LSM4-204ENST00000594828 WDR61Q9GZS3 305 aaKnown RBP16.49■□□□□ 0.23
LSM4-204ENST00000594828 AAMDCQ9H7C9 122 aa16.49■□□□□ 0.23
LSM4-204ENST00000594828 NUDT3O95989 172 aa16.48■□□□□ 0.23
LSM4-204ENST00000594828 DEFA1P59665 94 aa16.48■□□□□ 0.23
LSM4-204ENST00000594828 DEFA3P59666 94 aa16.48■□□□□ 0.23
LSM4-204ENST00000594828 ERCC8Q13216 396 aa16.48■□□□□ 0.23
LSM4-204ENST00000594828 MIR17HGQ75NE6 70 aa16.48■□□□□ 0.23
LSM4-204ENST00000594828 PPP1R1CQ8WVI7 109 aa16.48■□□□□ 0.23
LSM4-204ENST00000594828 FAM167A-AS1Q96KT0 104 aa16.48■□□□□ 0.23
LSM4-204ENST00000594828 LINC00477Q96M19 166 aa16.48■□□□□ 0.23
LSM4-204ENST00000594828 KCNIP2Q9NS61 270 aa16.48■□□□□ 0.23
LSM4-204ENST00000594828 HECTD4Q9Y4D8 3996 aa16.47■□□□□ 0.23
LSM4-204ENST00000594828 PRSS29PA6NIE9 313 aa16.47■□□□□ 0.23
LSM4-204ENST00000594828 SSNA1O43805 119 aa16.47■□□□□ 0.23
LSM4-204ENST00000594828 SLC25A5P05141 298 aaKnown RBP16.47■□□□□ 0.23
LSM4-204ENST00000594828 FAM3BP58499 235 aaPredicted RBP16.47■□□□□ 0.23
LSM4-204ENST00000594828 PYGO2Q9BRQ0 406 aa16.47■□□□□ 0.23
LSM4-204ENST00000594828 SNURFLB1AK76 121 aa16.46■□□□□ 0.23
LSM4-204ENST00000594828 NBEAP1P0C6P0 100 aa16.46■□□□□ 0.23
LSM4-204ENST00000594828 ICAM4Q14773 271 aa16.46■□□□□ 0.23
LSM4-204ENST00000594828 AGPAT4-IT1Q9H0P7 198 aa16.46■□□□□ 0.23
LSM4-204ENST00000594828 OR51M1Q9H341 326 aa16.46■□□□□ 0.23
LSM4-204ENST00000594828 C17orf112F2Z3M2 114 aa16.45■□□□□ 0.22
LSM4-204ENST00000594828 LINC00612Q8N6U2 182 aa16.45■□□□□ 0.22
LSM4-204ENST00000594828 MRPL32Q9BYC8 188 aaKnown RBP16.45■□□□□ 0.22
LSM4-204ENST00000594828 A0A1B0GVY2 172 aa16.44■□□□□ 0.22
LSM4-204ENST00000594828 MPC2O95563 127 aa16.44■□□□□ 0.22
LSM4-204ENST00000594828 OR5I1Q13606 314 aa16.44■□□□□ 0.22
LSM4-204ENST00000594828 FAM19A4Q96LR4 140 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms