RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 NTN3O00634 580 aaPredicted RBP9.92□□□□□ -0.82
LIG1-207ENST00000594759 Q86TA4 180 aa9.92□□□□□ -0.82
LIG1-207ENST00000594759 RAX2Q96IS3 184 aa9.92□□□□□ -0.82
LIG1-207ENST00000594759 KMT2EQ8IZD2 1858 aa9.92□□□□□ -0.82
LIG1-207ENST00000594759 LTBP2Q14767 1821 aa9.92□□□□□ -0.82
LIG1-207ENST00000594759 SRSF1Q07955 248 aaKnown RBP eCLIP9.92□□□□□ -0.823e-6■■■■□ 20.3
LIG1-207ENST00000594759 COLCA1Q6ZS62 124 aa9.92□□□□□ -0.82
LIG1-207ENST00000594759 C15orf53Q8NAA6 179 aa9.92□□□□□ -0.82
LIG1-207ENST00000594759 OR4C13Q8NGP0 309 aa9.92□□□□□ -0.82
LIG1-207ENST00000594759 FGF23Q9GZV9 251 aaPredicted RBP9.92□□□□□ -0.82
LIG1-207ENST00000594759 NOTCH3Q9UM47 2321 aa9.92□□□□□ -0.82
LIG1-207ENST00000594759 PINLYPA6NC86 204 aa9.92□□□□□ -0.82
LIG1-207ENST00000594759 J3KRW8 73 aa9.92□□□□□ -0.82
LIG1-207ENST00000594759 TMEM78Q5T7P6 136 aa9.92□□□□□ -0.82
LIG1-207ENST00000594759 MRPL35Q9NZE8 188 aaKnown RBP9.92□□□□□ -0.82
LIG1-207ENST00000594759 DOPEY2Q9Y3R5 2298 aa9.92□□□□□ -0.82
LIG1-207ENST00000594759 IGHV3-72A0A0B4J1Y9 119 aa9.91□□□□□ -0.82
LIG1-207ENST00000594759 A0A1B0GXF2 115 aa9.91□□□□□ -0.82
LIG1-207ENST00000594759 METRNQ9UJH8 293 aa9.91□□□□□ -0.82
LIG1-207ENST00000594759 CHD9Q3L8U1 2897 aa9.91□□□□□ -0.82
LIG1-207ENST00000594759 MYMXA0A1B0GTQ4 84 aa9.91□□□□□ -0.82
LIG1-207ENST00000594759 TNFRSF6BO95407 300 aa9.91□□□□□ -0.82
LIG1-207ENST00000594759 CD59P13987 128 aa9.91□□□□□ -0.82
LIG1-207ENST00000594759 NOTCH2Q04721 2471 aa9.91□□□□□ -0.82
LIG1-207ENST00000594759 CDH23Q9H251 3354 aa9.91□□□□□ -0.82
LIG1-207ENST00000594759 SLC25A20O43772 301 aa9.91□□□□□ -0.82
LIG1-207ENST00000594759 MRPL51Q4U2R6 128 aaKnown RBP9.91□□□□□ -0.82
LIG1-207ENST00000594759 OR11H6Q8NGC7 330 aa9.91□□□□□ -0.82
LIG1-207ENST00000594759 ATP6V0E2Q8NHE4 81 aa9.91□□□□□ -0.82
LIG1-207ENST00000594759 FABP5P3A8MUU1 101 aa9.9□□□□□ -0.82
LIG1-207ENST00000594759 H7C1H1 209 aa9.9□□□□□ -0.82
LIG1-207ENST00000594759 RNASE2P10153 161 aaKnown RBP9.9□□□□□ -0.82
LIG1-207ENST00000594759 NDUFV3P56181 108 aaKnown RBP9.9□□□□□ -0.82
LIG1-207ENST00000594759 FAM159AQ6UWV7 190 aa9.9□□□□□ -0.82
LIG1-207ENST00000594759 NGBQ9NPG2 151 aa9.9□□□□□ -0.82
LIG1-207ENST00000594759 ASIPP42127 132 aa9.9□□□□□ -0.82
LIG1-207ENST00000594759 LAGE3Q14657 143 aa9.9□□□□□ -0.82
LIG1-207ENST00000594759 NPYP01303 97 aa9.9□□□□□ -0.83
LIG1-207ENST00000594759 FAM120AOSQ5T036 256 aa9.9□□□□□ -0.83
LIG1-207ENST00000594759 TMEM14BQ9NUH8 114 aa9.9□□□□□ -0.83
LIG1-207ENST00000594759 PF4V1P10720 104 aa9.89□□□□□ -0.83
LIG1-207ENST00000594759 C2orf82Q6UX34 121 aa9.89□□□□□ -0.83
LIG1-207ENST00000594759 C8orf46Q8TAG6 207 aa9.89□□□□□ -0.83
LIG1-207ENST00000594759 MBD6Q96DN6 1003 aa9.89□□□□□ -0.83
LIG1-207ENST00000594759 TLN1Q9Y490 2541 aaKnown RBP9.89□□□□□ -0.83
LIG1-207ENST00000594759 XGP55808 180 aa9.89□□□□□ -0.83
LIG1-207ENST00000594759 CCL13Q99616 98 aa9.89□□□□□ -0.83
LIG1-207ENST00000594759 C10orf55Q5SWW7 151 aa9.89□□□□□ -0.83
LIG1-207ENST00000594759 FXYD5Q96DB9 178 aa9.89□□□□□ -0.83
LIG1-207ENST00000594759 TMEM101Q96IK0 257 aa9.89□□□□□ -0.83
LIG1-207ENST00000594759 EDA2RQ9HAV5 297 aa9.89□□□□□ -0.83
LIG1-207ENST00000594759 LY6G6EA0A0G2JKS1 128 aa9.88□□□□□ -0.83
LIG1-207ENST00000594759 COL8A2P25067 703 aa9.88□□□□□ -0.83
LIG1-207ENST00000594759 GGNQ86UU5 652 aa9.88□□□□□ -0.83
LIG1-207ENST00000594759 NTN5Q8WTR8 489 aaPredicted RBP9.88□□□□□ -0.83
LIG1-207ENST00000594759 TMEM126AQ9H061 195 aa9.88□□□□□ -0.83
LIG1-207ENST00000594759 U3KQA8 63 aa9.88□□□□□ -0.83
LIG1-207ENST00000594759 TRIOO75962 3097 aa9.88□□□□□ -0.83
LIG1-207ENST00000594759 ZNF883P0CG24 379 aa9.88□□□□□ -0.83
LIG1-207ENST00000594759 Q0VFX4 171 aa9.88□□□□□ -0.83
LIG1-207ENST00000594759 SLC25A39Q9BZJ4 359 aaPredicted RBP9.88□□□□□ -0.83
LIG1-207ENST00000594759 HLA-DRB4P13762 266 aa9.88□□□□□ -0.83
LIG1-207ENST00000594759 DLX6P56179 175 aa9.88□□□□□ -0.83
LIG1-207ENST00000594759 MORN5Q5VZ52 161 aa9.88□□□□□ -0.83
LIG1-207ENST00000594759 HLA-DRB4X5D2U9 266 aa9.88□□□□□ -0.83
LIG1-207ENST00000594759 ATRXP46100 2492 aa9.88□□□□□ -0.83
LIG1-207ENST00000594759 TNFAIP6P98066 277 aaPredicted RBP9.88□□□□□ -0.83
LIG1-207ENST00000594759 RNF7Q9UBF6 113 aa9.88□□□□□ -0.83
LIG1-207ENST00000594759 CGB1A6NKQ9 187 aa9.87□□□□□ -0.83
LIG1-207ENST00000594759 FAM201AQ5SY85 155 aa9.87□□□□□ -0.83
LIG1-207ENST00000594759 DSCAML1Q8TD84 2053 aa9.87□□□□□ -0.83
LIG1-207ENST00000594759 FGF6P10767 208 aa9.87□□□□□ -0.83
LIG1-207ENST00000594759 LOXL1Q08397 574 aaPredicted RBP9.87□□□□□ -0.83
LIG1-207ENST00000594759 ATXN8Q156A1 80 aa9.87□□□□□ -0.83
LIG1-207ENST00000594759 TIMD4Q96H15 378 aa9.87□□□□□ -0.83
LIG1-207ENST00000594759 NDUFB3O43676 98 aa9.87□□□□□ -0.83
LIG1-207ENST00000594759 FAM106CPP0CH98 169 aa9.87□□□□□ -0.83
LIG1-207ENST00000594759 RPL11P62913 178 aaKnown RBP9.87□□□□□ -0.83
LIG1-207ENST00000594759 FAM106AQ4KMX7 169 aa9.87□□□□□ -0.83
LIG1-207ENST00000594759 CCL17Q92583 94 aa9.87□□□□□ -0.83
LIG1-207ENST00000594759 GATA3P23771 443 aa9.86□□□□□ -0.83
LIG1-207ENST00000594759 ZNF503Q96F45 646 aa9.86□□□□□ -0.83
LIG1-207ENST00000594759 URB1-AS1Q96HZ7 61 aa9.86□□□□□ -0.83
LIG1-207ENST00000594759 FAM110AQ9BQ89 295 aa9.86□□□□□ -0.83
LIG1-207ENST00000594759 MRPL20Q9BYC9 149 aaKnown RBP9.86□□□□□ -0.83
LIG1-207ENST00000594759 IQCF6A8MYZ5 107 aa9.86□□□□□ -0.83
LIG1-207ENST00000594759 P0C879 139 aa9.86□□□□□ -0.83
LIG1-207ENST00000594759 ANKRD29Q8N6D5 301 aa9.86□□□□□ -0.83
LIG1-207ENST00000594759 TM2D2Q9BX73 214 aa9.86□□□□□ -0.83
LIG1-207ENST00000594759 H3BMM0 161 aa9.85□□□□□ -0.83
LIG1-207ENST00000594759 SH2D1AO60880 128 aa9.85□□□□□ -0.83
LIG1-207ENST00000594759 PMVKQ15126 192 aa9.85□□□□□ -0.83
LIG1-207ENST00000594759 PAPPA-AS1Q5QFB9 102 aa9.85□□□□□ -0.83
LIG1-207ENST00000594759 UBE2WQ96B02 151 aa9.85□□□□□ -0.83
LIG1-207ENST00000594759 SHISA9B4DS77 424 aa9.85□□□□□ -0.83
LIG1-207ENST00000594759 SLC25A16P16260 332 aa9.85□□□□□ -0.83
LIG1-207ENST00000594759 ORMDL2Q53FV1 153 aa9.85□□□□□ -0.83
LIG1-207ENST00000594759 ITLN1Q8WWA0 313 aa9.85□□□□□ -0.83
LIG1-207ENST00000594759 FAM167A-AS1Q96KT0 104 aa9.85□□□□□ -0.83
LIG1-207ENST00000594759 TMEM131Q92545 1883 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms