RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 NKX6-2Q9C056 277 aaPredicted RBP11.44□□□□□ -0.58
FOXA3-202ENST00000594297 AAMDCQ9H7C9 122 aa11.44□□□□□ -0.58
FOXA3-202ENST00000594297 NRN1Q9NPD7 142 aa11.44□□□□□ -0.58
FOXA3-202ENST00000594297 MANBALQ9NQG1 85 aa11.44□□□□□ -0.58
FOXA3-202ENST00000594297 MLXQ9UH92 298 aa11.44□□□□□ -0.58
FOXA3-202ENST00000594297 NMBP08949 121 aa11.43□□□□□ -0.58
FOXA3-202ENST00000594297 SSX7Q7RTT5 188 aa11.43□□□□□ -0.58
FOXA3-202ENST00000594297 LYPD1Q8N2G4 141 aa11.43□□□□□ -0.58
FOXA3-202ENST00000594297 FXYD5Q96DB9 178 aa11.43□□□□□ -0.58
FOXA3-202ENST00000594297 VPS13DQ5THJ4 4388 aa11.42□□□□□ -0.58
FOXA3-202ENST00000594297 TRAV2A0A0B4J234 112 aa11.42□□□□□ -0.58
FOXA3-202ENST00000594297 OR4C46A6NHA9 309 aa11.42□□□□□ -0.58
FOXA3-202ENST00000594297 TSPAN4O14817 238 aa11.42□□□□□ -0.58
FOXA3-202ENST00000594297 ZNF253O75346 499 aa11.42□□□□□ -0.58
FOXA3-202ENST00000594297 EIF3GO75821 320 aaKnown RBP eCLIP11.42□□□□□ -0.58
FOXA3-202ENST00000594297 IGLC2P0DOY2 106 aa11.42□□□□□ -0.58
FOXA3-202ENST00000594297 CMC4P56277 68 aaPredicted RBP11.42□□□□□ -0.58
FOXA3-202ENST00000594297 CD300EQ496F6 205 aaPredicted RBP11.42□□□□□ -0.58
FOXA3-202ENST00000594297 C16orf92Q96LL3 132 aa11.42□□□□□ -0.58
FOXA3-202ENST00000594297 SPAG8Q99932 426 aaPredicted RBP11.42□□□□□ -0.58
FOXA3-202ENST00000594297 GNG13Q9P2W3 67 aa11.42□□□□□ -0.58
FOXA3-202ENST00000594297 ARL2-SNX15V9GYD0 113 aa11.42□□□□□ -0.58
FOXA3-202ENST00000594297 IGKV3-7A0A075B6H7 116 aa11.41□□□□□ -0.58
FOXA3-202ENST00000594297 TRBV19A0A075B6N1 114 aa11.41□□□□□ -0.58
FOXA3-202ENST00000594297 A0A1W2PRE2 83 aa11.41□□□□□ -0.58
FOXA3-202ENST00000594297 OR11H12B2RN74 326 aa11.41□□□□□ -0.58
FOXA3-202ENST00000594297 EDN2P20800 178 aa11.41□□□□□ -0.58
FOXA3-202ENST00000594297 SNRPD3P62318 126 aaKnown RBP11.41□□□□□ -0.58
FOXA3-202ENST00000594297 FAM90A2PQ658T7 463 aa11.41□□□□□ -0.58
FOXA3-202ENST00000594297 LYPD6BQ8NI32 183 aa11.41□□□□□ -0.58
FOXA3-202ENST00000594297 TXNDC17Q9BRA2 123 aa11.41□□□□□ -0.58
FOXA3-202ENST00000594297 OVOL2Q9BRP0 275 aa11.41□□□□□ -0.58
FOXA3-202ENST00000594297 ZNF586Q9NXT0 402 aa11.41□□□□□ -0.58
FOXA3-202ENST00000594297 H3BQ15 152 aa11.4□□□□□ -0.58
FOXA3-202ENST00000594297 ISLRO14498 428 aa11.4□□□□□ -0.58
FOXA3-202ENST00000594297 MRPS12O15235 138 aaKnown RBP11.4□□□□□ -0.58
FOXA3-202ENST00000594297 CSN1S1P47710 185 aa11.4□□□□□ -0.58
FOXA3-202ENST00000594297 RANP62826 216 aaKnown RBP11.4□□□□□ -0.58
FOXA3-202ENST00000594297 GUCA2BQ16661 112 aa11.4□□□□□ -0.58
FOXA3-202ENST00000594297 CST9LP1Q5W188 147 aa11.4□□□□□ -0.58
FOXA3-202ENST00000594297 GBGT1Q8N5D6 347 aa11.4□□□□□ -0.58
FOXA3-202ENST00000594297 CMTM2Q8TAZ6 248 aa11.4□□□□□ -0.58
FOXA3-202ENST00000594297 SUN5Q8TC36 379 aa11.4□□□□□ -0.58
FOXA3-202ENST00000594297 PCNPQ8WW12 178 aaKnown RBP11.4□□□□□ -0.58
FOXA3-202ENST00000594297 ZNF503Q96F45 646 aa11.4□□□□□ -0.58
FOXA3-202ENST00000594297 MS4A6AQ9H2W1 248 aa11.4□□□□□ -0.58
FOXA3-202ENST00000594297 TMPRSS5Q9H3S3 457 aa11.4□□□□□ -0.58
FOXA3-202ENST00000594297 PRELID1Q9Y255 219 aa11.4□□□□□ -0.58
FOXA3-202ENST00000594297 DNAH6Q9C0G6 4158 aa11.39□□□□□ -0.59
FOXA3-202ENST00000594297 A0A0J9YWU9 116 aa11.39□□□□□ -0.59
FOXA3-202ENST00000594297 F6UZH7 168 aa11.39□□□□□ -0.59
FOXA3-202ENST00000594297 TFPI2P48307 235 aa11.39□□□□□ -0.59
FOXA3-202ENST00000594297 UBE2G2P60604 165 aa11.39□□□□□ -0.59
FOXA3-202ENST00000594297 CEMP1Q6PRD7 247 aaPredicted RBP11.39□□□□□ -0.59
FOXA3-202ENST00000594297 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.39□□□□□ -0.59
FOXA3-202ENST00000594297 WFDC3Q8IUB2 231 aa11.39□□□□□ -0.59
FOXA3-202ENST00000594297 TMEM61Q8N0U2 210 aa11.39□□□□□ -0.59
FOXA3-202ENST00000594297 RXFP4Q8TDU9 374 aa11.39□□□□□ -0.59
FOXA3-202ENST00000594297 EIF5A2Q9GZV4 153 aaKnown RBP11.39□□□□□ -0.59
FOXA3-202ENST00000594297 OTORQ9NRC9 128 aa11.39□□□□□ -0.59
FOXA3-202ENST00000594297 VAX2Q9UIW0 290 aa11.39□□□□□ -0.59
FOXA3-202ENST00000594297 PAGE4O60829 102 aa11.38□□□□□ -0.59
FOXA3-202ENST00000594297 SNRPCP09234 159 aaKnown RBP11.38□□□□□ -0.59
FOXA3-202ENST00000594297 CCL20P78556 96 aa11.38□□□□□ -0.59
FOXA3-202ENST00000594297 TCEAL7Q9BRU2 100 aa11.38□□□□□ -0.59
FOXA3-202ENST00000594297 PGPA6NDG6 321 aa11.37□□□□□ -0.59
FOXA3-202ENST00000594297 RBFOX3A6NFN3 312 aa11.37□□□□□ -0.59
FOXA3-202ENST00000594297 H3BTX0 84 aa11.37□□□□□ -0.59
FOXA3-202ENST00000594297 K7EQM0 130 aa11.37□□□□□ -0.59
FOXA3-202ENST00000594297 BCL2P10415 239 aa11.37□□□□□ -0.59
FOXA3-202ENST00000594297 PEA15Q15121 130 aa11.37□□□□□ -0.59
FOXA3-202ENST00000594297 Q9H3A6 140 aa11.37□□□□□ -0.59
FOXA3-202ENST00000594297 ZNF331Q9NQX6 463 aaPredicted RBP11.37□□□□□ -0.59
FOXA3-202ENST00000594297 SELENOKQ9Y6D0 94 aa11.37□□□□□ -0.59
FOXA3-202ENST00000594297 FAM74A7A6NL05 159 aa11.36□□□□□ -0.59
FOXA3-202ENST00000594297 C11orf94C9JXX5 98 aa11.36□□□□□ -0.59
FOXA3-202ENST00000594297 K7EQG2 157 aa11.36□□□□□ -0.59
FOXA3-202ENST00000594297 SLC25A5P05141 298 aaKnown RBP11.36□□□□□ -0.59
FOXA3-202ENST00000594297 SUMO1P63165 101 aaKnown RBP11.36□□□□□ -0.59
FOXA3-202ENST00000594297 MEF2BQ02080 365 aaPredicted RBP11.36□□□□□ -0.59
FOXA3-202ENST00000594297 ICAM4Q14773 271 aa11.36□□□□□ -0.59
FOXA3-202ENST00000594297 ARL6IP6Q8N6S5 226 aa11.36□□□□□ -0.59
FOXA3-202ENST00000594297 MRPL53Q96EL3 112 aaKnown RBP11.36□□□□□ -0.59
FOXA3-202ENST00000594297 C17orf77Q96MU5 243 aa11.36□□□□□ -0.59
FOXA3-202ENST00000594297 LINC00052Q96N35 136 aa11.36□□□□□ -0.59
FOXA3-202ENST00000594297 FAM210AQ96ND0 272 aa11.36□□□□□ -0.59
FOXA3-202ENST00000594297 SMDT1Q9H4I9 107 aa11.36□□□□□ -0.59
FOXA3-202ENST00000594297 RAB19A4D1S5 217 aa11.35□□□□□ -0.59
FOXA3-202ENST00000594297 PDE6DO43924 150 aa11.35□□□□□ -0.59
FOXA3-202ENST00000594297 NDUFB4O95168 129 aa11.35□□□□□ -0.59
FOXA3-202ENST00000594297 C5orf17Q8NAS9 161 aa11.35□□□□□ -0.59
FOXA3-202ENST00000594297 ZNF738Q8NE65 137 aa11.35□□□□□ -0.59
FOXA3-202ENST00000594297 DCANP1Q8TF63 244 aa11.35□□□□□ -0.59
FOXA3-202ENST00000594297 MED9Q9NWA0 146 aa11.35□□□□□ -0.59
FOXA3-202ENST00000594297 KLK5Q9Y337 293 aaPredicted RBP11.35□□□□□ -0.59
FOXA3-202ENST00000594297 LOC102723971A0A1B0GUV8 181 aa11.34□□□□□ -0.59
FOXA3-202ENST00000594297 SERTM2A0A1B0GWG4 89 aa11.34□□□□□ -0.59
FOXA3-202ENST00000594297 PSG3Q16557 428 aa11.34□□□□□ -0.59
FOXA3-202ENST00000594297 NDUFA5Q16718 116 aa11.34□□□□□ -0.59
FOXA3-202ENST00000594297 TOR2AQ5JU69 321 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms