RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 NDUFA3O95167 84 aa12.93□□□□□ -0.34
LIG1-206ENST00000594067 FGF6P10767 208 aa12.93□□□□□ -0.34
LIG1-206ENST00000594067 FOXC1Q12948 553 aa12.93□□□□□ -0.34
LIG1-206ENST00000594067 TMEM97Q5BJF2 176 aa12.93□□□□□ -0.34
LIG1-206ENST00000594067 NPBQ8NG41 125 aa12.93□□□□□ -0.34
LIG1-206ENST00000594067 OR11H6Q8NGC7 330 aa12.93□□□□□ -0.34
LIG1-206ENST00000594067 TLN1Q9Y490 2541 aaKnown RBP12.92□□□□□ -0.34
LIG1-206ENST00000594067 IFI27P40305 119 aaPredicted RBP12.92□□□□□ -0.34
LIG1-206ENST00000594067 LOXL1Q08397 574 aaPredicted RBP12.92□□□□□ -0.34
LIG1-206ENST00000594067 PTPRZ1P23471 2315 aaPredicted RBP12.92□□□□□ -0.34
LIG1-206ENST00000594067 SERTM2A0A1B0GWG4 89 aa12.92□□□□□ -0.34
LIG1-206ENST00000594067 CT45A10P0DMU9 189 aa12.92□□□□□ -0.34
LIG1-206ENST00000594067 C5orf64Q2M2E5 130 aa12.92□□□□□ -0.34
LIG1-206ENST00000594067 RAB1BQ9H0U4 201 aa12.92□□□□□ -0.34
LIG1-206ENST00000594067 AAMDCQ9H7C9 122 aa12.92□□□□□ -0.34
LIG1-206ENST00000594067 A0A1B0GW15 77 aa12.91□□□□□ -0.34
LIG1-206ENST00000594067 MFAP4P55083 255 aa12.91□□□□□ -0.34
LIG1-206ENST00000594067 SEC11AP67812 179 aa12.91□□□□□ -0.34
LIG1-206ENST00000594067 IGLV11-55A0A075B6I3 123 aa12.91□□□□□ -0.34
LIG1-206ENST00000594067 F8W735 103 aaPredicted RBP12.91□□□□□ -0.34
LIG1-206ENST00000594067 CEACAM3P40198 252 aa12.91□□□□□ -0.34
LIG1-206ENST00000594067 NDPQ00604 133 aa12.91□□□□□ -0.34
LIG1-206ENST00000594067 TMEM213A2RRL7 107 aa12.9□□□□□ -0.34
LIG1-206ENST00000594067 NCBP2LA6PVI3 153 aaKnown RBP12.9□□□□□ -0.34
LIG1-206ENST00000594067 LYZL1Q6UWQ5 148 aa12.9□□□□□ -0.34
LIG1-206ENST00000594067 ZNF493Q6ZR52 646 aa12.9□□□□□ -0.34
LIG1-206ENST00000594067 DPF1Q92782 380 aa12.9□□□□□ -0.34
LIG1-206ENST00000594067 IGKV2-40A0A087WW87 121 aaPredicted RBP12.9□□□□□ -0.34
LIG1-206ENST00000594067 LOC389332A0A1B0GUA5 103 aa12.9□□□□□ -0.34
LIG1-206ENST00000594067 K7ENP7 123 aa12.9□□□□□ -0.34
LIG1-206ENST00000594067 IGKV2D-40P01614 121 aaPredicted RBP12.9□□□□□ -0.34
LIG1-206ENST00000594067 CDSNQ15517 529 aa12.9□□□□□ -0.34
LIG1-206ENST00000594067 ARPC1AQ92747 370 aa12.9□□□□□ -0.34
LIG1-206ENST00000594067 ANKHD1Q8IWZ3 2542 aaKnown RBP12.9□□□□□ -0.35
LIG1-206ENST00000594067 TMEM189A5PLL7 270 aa12.89□□□□□ -0.35
LIG1-206ENST00000594067 DYNAPQ8N1N2 210 aa12.89□□□□□ -0.35
LIG1-206ENST00000594067 OR8A1Q8NGG7 326 aa12.89□□□□□ -0.35
LIG1-206ENST00000594067 SIGLEC8Q9NYZ4 499 aa12.89□□□□□ -0.35
LIG1-206ENST00000594067 SH2D1AO60880 128 aa12.89□□□□□ -0.35
LIG1-206ENST00000594067 C21orf62Q9NYP8 219 aa12.89□□□□□ -0.35
LIG1-206ENST00000594067 RABAC1Q9UI14 185 aa12.89□□□□□ -0.35
LIG1-206ENST00000594067 NPIPB5A8MRT5 1133 aa12.88□□□□□ -0.35
LIG1-206ENST00000594067 ODF3BA8MYP8 253 aa12.88□□□□□ -0.35
LIG1-206ENST00000594067 D6R8Y8 96 aa12.88□□□□□ -0.35
LIG1-206ENST00000594067 PDE6HQ13956 83 aa12.88□□□□□ -0.35
LIG1-206ENST00000594067 Q6AWC8 147 aa12.88□□□□□ -0.35
LIG1-206ENST00000594067 IGFL4Q6B9Z1 124 aa12.88□□□□□ -0.35
LIG1-206ENST00000594067 TIMD4Q96H15 378 aa12.88□□□□□ -0.35
LIG1-206ENST00000594067 CEP295Q9C0D2 2601 aa12.88□□□□□ -0.35
LIG1-206ENST00000594067 GAGE10A6NGK3 116 aa12.88□□□□□ -0.35
LIG1-206ENST00000594067 CCL21O00585 134 aa12.88□□□□□ -0.35
LIG1-206ENST00000594067 UQCRFS1P47985 274 aa12.88□□□□□ -0.35
LIG1-206ENST00000594067 SMIM15Q7Z3B0 74 aa12.88□□□□□ -0.35
LIG1-206ENST00000594067 AMN1Q8IY45 258 aa12.88□□□□□ -0.35
LIG1-206ENST00000594067 TMEM190Q8WZ59 177 aa12.88□□□□□ -0.35
LIG1-206ENST00000594067 IGHV3OR16-8A0A075B7F1 116 aa12.87□□□□□ -0.35
LIG1-206ENST00000594067 K7ERU9 68 aa12.87□□□□□ -0.35
LIG1-206ENST00000594067 PRTN3P24158 256 aa12.87□□□□□ -0.35
LIG1-206ENST00000594067 UFSP1Q6NVU6 142 aa12.87□□□□□ -0.35
LIG1-206ENST00000594067 ZNF562Q6V9R5 426 aa12.87□□□□□ -0.35
LIG1-206ENST00000594067 BOD1L2Q8IYS8 172 aa12.87□□□□□ -0.35
LIG1-206ENST00000594067 U3KQK5 164 aa12.87□□□□□ -0.35
LIG1-206ENST00000594067 NBL1P41271 181 aa12.87□□□□□ -0.35
LIG1-206ENST00000594067 LGALS9BQ3B8N2 356 aa12.87□□□□□ -0.35
LIG1-206ENST00000594067 LGALS9CQ6DKI2 356 aa12.87□□□□□ -0.35
LIG1-206ENST00000594067 S100A7AQ86SG5 101 aa12.87□□□□□ -0.35
LIG1-206ENST00000594067 M0R1W7 72 aa12.86□□□□□ -0.35
LIG1-206ENST00000594067 FAM104BQ5XKR9 115 aa12.86□□□□□ -0.35
LIG1-206ENST00000594067 OR1N2Q8NGR9 330 aa12.86□□□□□ -0.35
LIG1-206ENST00000594067 Q8TAT8 98 aa12.86□□□□□ -0.35
LIG1-206ENST00000594067 IGHV3-35A0A0C4DH35 117 aa12.86□□□□□ -0.35
LIG1-206ENST00000594067 HLA-DMBP28068 263 aa12.86□□□□□ -0.35
LIG1-206ENST00000594067 FXYD7P58549 80 aa12.86□□□□□ -0.35
LIG1-206ENST00000594067 NHLH1Q02575 133 aa12.86□□□□□ -0.35
LIG1-206ENST00000594067 TTC9CQ8N5M4 171 aa12.86□□□□□ -0.35
LIG1-206ENST00000594067 PRELID3AQ96N28 172 aa12.86□□□□□ -0.35
LIG1-206ENST00000594067 MUC6Q6W4X9 2439 aa12.86□□□□□ -0.35
LIG1-206ENST00000594067 C9orf118A6NHY6 69 aa12.85□□□□□ -0.35
LIG1-206ENST00000594067 H3BRM9 83 aa12.85□□□□□ -0.35
LIG1-206ENST00000594067 FBXL19-AS1Q494R0 122 aa12.85□□□□□ -0.35
LIG1-206ENST00000594067 CSTL1Q9H114 145 aa12.85□□□□□ -0.35
LIG1-206ENST00000594067 CACNG7P62955 275 aa12.85□□□□□ -0.35
LIG1-206ENST00000594067 PAX8Q06710 450 aa12.85□□□□□ -0.35
LIG1-206ENST00000594067 VMO1Q7Z5L0 202 aa12.85□□□□□ -0.35
LIG1-206ENST00000594067 ZNF48Q96MX3 618 aaPredicted RBP12.85□□□□□ -0.35
LIG1-206ENST00000594067 JMJD8Q96S16 334 aa12.85□□□□□ -0.35
LIG1-206ENST00000594067 SAP30O75446 220 aa12.85□□□□□ -0.35
LIG1-206ENST00000594067 EGR2P11161 476 aaPredicted RBP12.85□□□□□ -0.35
LIG1-206ENST00000594067 RPL7P18124 248 aaKnown RBP12.85□□□□□ -0.35
LIG1-206ENST00000594067 PRR25Q96S07 402 aa12.85□□□□□ -0.35
LIG1-206ENST00000594067 VGLL1Q99990 258 aa12.85□□□□□ -0.35
LIG1-206ENST00000594067 SMAD5-AS1Q9Y6J3 95 aa12.85□□□□□ -0.35
LIG1-206ENST00000594067 PTPRQQ9UMZ3 2332 aa12.84□□□□□ -0.35
LIG1-206ENST00000594067 SPTA1P02549 2419 aa12.84□□□□□ -0.35
LIG1-206ENST00000594067 ZNF80P51504 273 aaPredicted RBP12.84□□□□□ -0.35
LIG1-206ENST00000594067 TCTAP57738 103 aa12.84□□□□□ -0.35
LIG1-206ENST00000594067 ORMDL3Q8N138 153 aa12.84□□□□□ -0.35
LIG1-206ENST00000594067 SMKR1H3BMG3 65 aa12.84□□□□□ -0.35
LIG1-206ENST00000594067 MRPL51Q4U2R6 128 aaKnown RBP12.84□□□□□ -0.35
LIG1-206ENST00000594067 MEGF9Q9H1U4 602 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms