RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 TCRAP04437 139 aa10.18□□□□□ -0.78
VMP1-217ENST00000593168 S100A9P06702 114 aaKnown RBP10.18□□□□□ -0.78
VMP1-217ENST00000593168 FOLR2P14207 255 aa10.18□□□□□ -0.78
VMP1-217ENST00000593168 EDN2P20800 178 aa10.18□□□□□ -0.78
VMP1-217ENST00000593168 TAS2R60P59551 318 aa10.18□□□□□ -0.78
VMP1-217ENST00000593168 PNRC1Q12796 327 aaPredicted RBP10.18□□□□□ -0.78
VMP1-217ENST00000593168 TMEM241Q24JQ0 296 aa10.18□□□□□ -0.78
VMP1-217ENST00000593168 ZNF674Q2M3X9 581 aa10.18□□□□□ -0.78
VMP1-217ENST00000593168 SAMD13Q5VXD3 122 aa10.18□□□□□ -0.78
VMP1-217ENST00000593168 TCF24Q7RTU0 167 aa10.18□□□□□ -0.78
VMP1-217ENST00000593168 TVP23CQ96ET8 276 aa10.18□□□□□ -0.78
VMP1-217ENST00000593168 ATG101Q9BSB4 218 aa10.18□□□□□ -0.78
VMP1-217ENST00000593168 NAT8Q9UHE5 227 aa10.18□□□□□ -0.78
VMP1-217ENST00000593168 PRELID1Q9Y255 219 aa10.18□□□□□ -0.78
VMP1-217ENST00000593168 AKR1C3P42330 323 aa10.17□□□□□ -0.78
VMP1-217ENST00000593168 CSN1S1P47710 185 aa10.17□□□□□ -0.78
VMP1-217ENST00000593168 CNN1P51911 297 aaKnown RBP10.17□□□□□ -0.78
VMP1-217ENST00000593168 MRPL53Q96EL3 112 aaKnown RBP10.17□□□□□ -0.78
VMP1-217ENST00000593168 DERL1Q9BUN8 251 aa10.17□□□□□ -0.78
VMP1-217ENST00000593168 SDF2L1Q9HCN8 221 aa10.17□□□□□ -0.78
VMP1-217ENST00000593168 NRN1Q9NPD7 142 aa10.17□□□□□ -0.78
VMP1-217ENST00000593168 KLF12Q9Y4X4 402 aa10.17□□□□□ -0.78
VMP1-217ENST00000593168 DNAH3Q8TD57 4116 aa10.17□□□□□ -0.78
VMP1-217ENST00000593168 TRAV8-2A0A0B4J237 113 aa10.16□□□□□ -0.78
VMP1-217ENST00000593168 SERTM2A0A1B0GWG4 89 aa10.16□□□□□ -0.78
VMP1-217ENST00000593168 C9JCJ5 164 aa10.16□□□□□ -0.78
VMP1-217ENST00000593168 CSN3P07498 182 aa10.16□□□□□ -0.78
VMP1-217ENST00000593168 RPL35P42766 123 aaKnown RBP10.16□□□□□ -0.78
VMP1-217ENST00000593168 GNG5P63218 68 aa10.16□□□□□ -0.78
VMP1-217ENST00000593168 TMEM183BQ1AE95 376 aa10.16□□□□□ -0.78
VMP1-217ENST00000593168 BEAN1Q3B7T3 259 aa10.16□□□□□ -0.78
VMP1-217ENST00000593168 NSUN5P1Q3KNT7 163 aa10.16□□□□□ -0.78
VMP1-217ENST00000593168 ADAMTSL5Q6ZMM2 481 aa10.16□□□□□ -0.78
VMP1-217ENST00000593168 CLRN3Q8NCR9 226 aa10.16□□□□□ -0.78
VMP1-217ENST00000593168 MLXQ9UH92 298 aa10.16□□□□□ -0.78
VMP1-217ENST00000593168 LY96Q9Y6Y9 160 aa10.16□□□□□ -0.78
VMP1-217ENST00000593168 TRBV6-1A0A0K0K1D8 114 aa10.15□□□□□ -0.78
VMP1-217ENST00000593168 DIRC3C9JPN6 131 aa10.15□□□□□ -0.78
VMP1-217ENST00000593168 G3V4G9 280 aa10.15□□□□□ -0.78
VMP1-217ENST00000593168 K7EQM0 130 aa10.15□□□□□ -0.78
VMP1-217ENST00000593168 M0R3E3 92 aa10.15□□□□□ -0.78
VMP1-217ENST00000593168 SOCS3O14543 225 aa10.15□□□□□ -0.78
VMP1-217ENST00000593168 PRB2P02812 416 aaPredicted RBP10.15□□□□□ -0.78
VMP1-217ENST00000593168 RPL11P62913 178 aaKnown RBP10.15□□□□□ -0.78
VMP1-217ENST00000593168 LCN12Q6JVE5 192 aa10.15□□□□□ -0.78
VMP1-217ENST00000593168 C16orf92Q96LL3 132 aa10.15□□□□□ -0.78
VMP1-217ENST00000593168 SIGLEC8Q9NYZ4 499 aa10.15□□□□□ -0.78
VMP1-217ENST00000593168 TRBV20OR9-2A0A075B6H5 130 aa10.14□□□□□ -0.79
VMP1-217ENST00000593168 FBLL1A6NHQ2 334 aaKnown RBP10.14□□□□□ -0.79
VMP1-217ENST00000593168 M0R036 132 aa10.14□□□□□ -0.79
VMP1-217ENST00000593168 ISLRO14498 428 aa10.14□□□□□ -0.79
VMP1-217ENST00000593168 OVOL1O14753 267 aa10.14□□□□□ -0.79
VMP1-217ENST00000593168 RPL23P62829 140 aaKnown RBP10.14□□□□□ -0.79
VMP1-217ENST00000593168 IGFL4Q6B9Z1 124 aa10.14□□□□□ -0.79
VMP1-217ENST00000593168 LINC00479Q96M42 142 aa10.14□□□□□ -0.79
VMP1-217ENST00000593168 B4DEV8 164 aa10.13□□□□□ -0.79
VMP1-217ENST00000593168 HLA-DMBP28068 263 aa10.13□□□□□ -0.79
VMP1-217ENST00000593168 GNG4P50150 75 aa10.13□□□□□ -0.79
VMP1-217ENST00000593168 UBE2G1P62253 170 aa10.13□□□□□ -0.79
VMP1-217ENST00000593168 PSG3Q16557 428 aa10.13□□□□□ -0.79
VMP1-217ENST00000593168 CENPWQ5EE01 88 aa10.13□□□□□ -0.79
VMP1-217ENST00000593168 ATRAIDQ6UW56 229 aa10.13□□□□□ -0.79
VMP1-217ENST00000593168 GOLT1AQ6ZVE7 132 aa10.13□□□□□ -0.79
VMP1-217ENST00000593168 LINC01551Q86U37 167 aa10.13□□□□□ -0.79
VMP1-217ENST00000593168 TMEM75Q8N9X5 138 aa10.13□□□□□ -0.79
VMP1-217ENST00000593168 OCC1Q8TAD7 63 aa10.13□□□□□ -0.79
VMP1-217ENST00000593168 DCANP1Q8TF63 244 aa10.13□□□□□ -0.79
VMP1-217ENST00000593168 FMC1Q96HJ9 113 aa10.13□□□□□ -0.79
VMP1-217ENST00000593168 IGF2BP2-AS1Q96M15 143 aa10.13□□□□□ -0.79
VMP1-217ENST00000593168 RPH3ALQ9UNE2 315 aa10.13□□□□□ -0.79
VMP1-217ENST00000593168 TRAV2A0A0B4J234 112 aa10.12□□□□□ -0.79
VMP1-217ENST00000593168 TRAV34A0A0B4J273 112 aa10.12□□□□□ -0.79
VMP1-217ENST00000593168 C7orf77A4D0Y5 90 aa10.12□□□□□ -0.79
VMP1-217ENST00000593168 IGLV2-11P01706 119 aa10.12□□□□□ -0.79
VMP1-217ENST00000593168 ID1P41134 155 aa10.12□□□□□ -0.79
VMP1-217ENST00000593168 PAFAH1B2P68402 229 aa10.12□□□□□ -0.79
VMP1-217ENST00000593168 RHEBQ15382 184 aa10.12□□□□□ -0.79
VMP1-217ENST00000593168 DEFB114Q30KQ6 69 aa10.12□□□□□ -0.79
VMP1-217ENST00000593168 KPRPQ5T749 579 aaPredicted RBP10.12□□□□□ -0.79
VMP1-217ENST00000593168 BAGE2Q86Y30 109 aa10.12□□□□□ -0.79
VMP1-217ENST00000593168 SMIM12Q96EX1 92 aa10.12□□□□□ -0.79
VMP1-217ENST00000593168 MS4A6AQ9H2W1 248 aa10.12□□□□□ -0.79
VMP1-217ENST00000593168 IGKV3-7A0A075B6H7 116 aa10.11□□□□□ -0.79
VMP1-217ENST00000593168 TRAV25A0A0B4J276 109 aa10.11□□□□□ -0.79
VMP1-217ENST00000593168 RBAKDNA6NC62 111 aa10.11□□□□□ -0.79
VMP1-217ENST00000593168 ZNF705FA8MVS1 300 aaPredicted RBP10.11□□□□□ -0.79
VMP1-217ENST00000593168 K7EQG2 157 aa10.11□□□□□ -0.79
VMP1-217ENST00000593168 IGLV2-8P01709 118 aa10.11□□□□□ -0.79
VMP1-217ENST00000593168 FLI1Q01543 452 aaPredicted RBP10.11□□□□□ -0.79
VMP1-217ENST00000593168 ADIRFQ15847 76 aa10.11□□□□□ -0.79
VMP1-217ENST00000593168 SAMD5Q5TGI4 173 aa10.11□□□□□ -0.79
VMP1-217ENST00000593168 RNF182Q8N6D2 247 aa10.11□□□□□ -0.79
VMP1-217ENST00000593168 DYNLRB2Q8TF09 96 aa10.11□□□□□ -0.79
VMP1-217ENST00000593168 PGPEP1LA6NFU8 196 aa10.1□□□□□ -0.79
VMP1-217ENST00000593168 DNASE2O00115 360 aaPredicted RBP10.1□□□□□ -0.79
VMP1-217ENST00000593168 TSPAN4O14817 238 aa10.1□□□□□ -0.79
VMP1-217ENST00000593168 LTAP01374 205 aa10.1□□□□□ -0.79
VMP1-217ENST00000593168 RBPMS2Q6ZRY4 209 aaKnown RBP10.1□□□□□ -0.79
VMP1-217ENST00000593168 GBGT1Q8N5D6 347 aa10.1□□□□□ -0.79
VMP1-217ENST00000593168 C20orf173Q96LM9 149 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms