RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 EIF5AL1Q6IS14 154 aaKnown RBP7.13□□□□□ -1.27
DDX39A-220ENST00000593008 DPPA3Q6W0C5 159 aa7.13□□□□□ -1.27
DDX39A-220ENST00000593008 PQLC2Q6ZP29 291 aa7.13□□□□□ -1.27
DDX39A-220ENST00000593008 Q9H3A6 140 aa7.13□□□□□ -1.27
DDX39A-220ENST00000593008 TUBA4BQ9H853 241 aa7.13□□□□□ -1.27
DDX39A-220ENST00000593008 TRAV2A0A0B4J234 112 aa7.12□□□□□ -1.27
DDX39A-220ENST00000593008 IGKV3-20P01619 116 aa7.12□□□□□ -1.27
DDX39A-220ENST00000593008 ID1P41134 155 aa7.12□□□□□ -1.27
DDX39A-220ENST00000593008 PSMB3P49720 205 aa7.12□□□□□ -1.27
DDX39A-220ENST00000593008 ZNF738Q8NE65 137 aa7.12□□□□□ -1.27
DDX39A-220ENST00000593008 SUN5Q8TC36 379 aa7.12□□□□□ -1.27
DDX39A-220ENST00000593008 LRRC20Q8TCA0 184 aa7.12□□□□□ -1.27
DDX39A-220ENST00000593008 CLEC5AQ9NY25 188 aa7.12□□□□□ -1.27
DDX39A-220ENST00000593008 GNG13Q9P2W3 67 aa7.12□□□□□ -1.27
DDX39A-220ENST00000593008 AGRNO00468 2067 aa7.12□□□□□ -1.27
DDX39A-220ENST00000593008 TENM3Q9P273 2699 aa7.11□□□□□ -1.27
DDX39A-220ENST00000593008 STAB2Q8WWQ8 2551 aa7.11□□□□□ -1.27
DDX39A-220ENST00000593008 FAM74A7A6NL05 159 aa7.11□□□□□ -1.27
DDX39A-220ENST00000593008 OR11H12B2RN74 326 aa7.11□□□□□ -1.27
DDX39A-220ENST00000593008 ISLRO14498 428 aa7.11□□□□□ -1.27
DDX39A-220ENST00000593008 PAGE4O60829 102 aa7.11□□□□□ -1.27
DDX39A-220ENST00000593008 RPL35AP18077 110 aaKnown RBP7.11□□□□□ -1.27
DDX39A-220ENST00000593008 RAB5CP51148 216 aa7.11□□□□□ -1.27
DDX39A-220ENST00000593008 ERCC8Q13216 396 aa7.11□□□□□ -1.27
DDX39A-220ENST00000593008 PSG3Q16557 428 aa7.11□□□□□ -1.27
DDX39A-220ENST00000593008 HAGHQ16775 308 aa7.11□□□□□ -1.27
DDX39A-220ENST00000593008 ACTL10Q5JWF8 245 aa7.11□□□□□ -1.27
DDX39A-220ENST00000593008 RPUSD4Q96CM3 377 aaKnown RBP7.11□□□□□ -1.27
DDX39A-220ENST00000593008 SGK494Q96LW2 274 aa7.11□□□□□ -1.27
DDX39A-220ENST00000593008 FAM110AQ9BQ89 295 aa7.11□□□□□ -1.27
DDX39A-220ENST00000593008 SRD5A3Q9H8P0 318 aa7.11□□□□□ -1.27
DDX39A-220ENST00000593008 TRAV8-1A0A0A6YYK1 113 aa7.1□□□□□ -1.27
DDX39A-220ENST00000593008 IFNA7P01567 189 aa7.1□□□□□ -1.27
DDX39A-220ENST00000593008 FXYD7P58549 80 aa7.1□□□□□ -1.27
DDX39A-220ENST00000593008 SNRPD3P62318 126 aaKnown RBP7.1□□□□□ -1.27
DDX39A-220ENST00000593008 HIST1H1AQ02539 215 aaPredicted RBP7.1□□□□□ -1.27
DDX39A-220ENST00000593008 KIR3DS1Q14943 382 aa7.1□□□□□ -1.27
DDX39A-220ENST00000593008 Q8TAT8 98 aa7.1□□□□□ -1.27
DDX39A-220ENST00000593008 WWC2-AS2Q96NR7 200 aa7.1□□□□□ -1.27
DDX39A-220ENST00000593008 RCHY1Q96PM5 261 aa7.1□□□□□ -1.27
DDX39A-220ENST00000593008 RARRES2Q99969 163 aa7.1□□□□□ -1.27
DDX39A-220ENST00000593008 VGLL1Q99990 258 aa7.1□□□□□ -1.27
DDX39A-220ENST00000593008 SLC50A1Q9BRV3 221 aa7.1□□□□□ -1.27
DDX39A-220ENST00000593008 OTORQ9NRC9 128 aa7.1□□□□□ -1.27
DDX39A-220ENST00000593008 TMEM167BQ9NRX6 74 aa7.1□□□□□ -1.27
DDX39A-220ENST00000593008 TRAV1-1A0A0B4J248 108 aa7.09□□□□□ -1.27
DDX39A-220ENST00000593008 A0A0J9YX75 114 aa7.09□□□□□ -1.27
DDX39A-220ENST00000593008 LOC102723971A0A1B0GUV8 181 aa7.09□□□□□ -1.27
DDX39A-220ENST00000593008 SCO2A0A1W2PP80 73 aa7.09□□□□□ -1.27
DDX39A-220ENST00000593008 PGPA6NDG6 321 aa7.09□□□□□ -1.27
DDX39A-220ENST00000593008 A8MZ25 164 aa7.09□□□□□ -1.27
DDX39A-220ENST00000593008 SLC25A5P05141 298 aaKnown RBP7.09□□□□□ -1.27
DDX39A-220ENST00000593008 CNN1P51911 297 aaKnown RBP7.09□□□□□ -1.27
DDX39A-220ENST00000593008 SRSF3P84103 164 aaKnown RBP7.09□□□□□ -1.27
DDX39A-220ENST00000593008 PDE6HQ13956 83 aa7.09□□□□□ -1.27
DDX39A-220ENST00000593008 GUK1Q16774 197 aa7.09□□□□□ -1.27
DDX39A-220ENST00000593008 CST9LP1Q5W188 147 aa7.09□□□□□ -1.27
DDX39A-220ENST00000593008 GOLT1AQ6ZVE7 132 aa7.09□□□□□ -1.27
DDX39A-220ENST00000593008 LINC00479Q96M42 142 aa7.09□□□□□ -1.27
DDX39A-220ENST00000593008 SAV1Q9H4B6 383 aaPredicted RBP7.09□□□□□ -1.27
DDX39A-220ENST00000593008 ZMAT4Q9H898 229 aa7.09□□□□□ -1.27
DDX39A-220ENST00000593008 RETNQ9HD89 108 aa7.09□□□□□ -1.27
DDX39A-220ENST00000593008 NBEAL2Q6ZNJ1 2754 aa7.09□□□□□ -1.27
DDX39A-220ENST00000593008 TRAV34A0A0B4J273 112 aa7.08□□□□□ -1.28
DDX39A-220ENST00000593008 ZNF253O75346 499 aa7.08□□□□□ -1.28
DDX39A-220ENST00000593008 BCL2P10415 239 aa7.08□□□□□ -1.28
DDX39A-220ENST00000593008 SUMO1P63165 101 aaKnown RBP7.08□□□□□ -1.28
DDX39A-220ENST00000593008 PSG9Q00887 426 aa7.08□□□□□ -1.28
DDX39A-220ENST00000593008 TOR2AQ5JU69 321 aa7.08□□□□□ -1.28
DDX39A-220ENST00000593008 PRR9Q5T870 116 aa7.08□□□□□ -1.28
DDX39A-220ENST00000593008 TRPT1Q86TN4 253 aaKnown RBP7.08□□□□□ -1.28
DDX39A-220ENST00000593008 CCDC28AQ8IWP9 274 aa7.08□□□□□ -1.28
DDX39A-220ENST00000593008 OR4B1Q8NGF8 309 aa7.08□□□□□ -1.28
DDX39A-220ENST00000593008 OR8A1Q8NGG7 326 aa7.08□□□□□ -1.28
DDX39A-220ENST00000593008 LYPD6BQ8NI32 183 aa7.08□□□□□ -1.28
DDX39A-220ENST00000593008 TM2D3Q9BRN9 247 aa7.08□□□□□ -1.28
DDX39A-220ENST00000593008 SLC35B3Q9H1N7 401 aa7.08□□□□□ -1.28
DDX39A-220ENST00000593008 A0A1W2PRE2 83 aa7.07□□□□□ -1.28
DDX39A-220ENST00000593008 DIRC3C9JPN6 131 aa7.07□□□□□ -1.28
DDX39A-220ENST00000593008 C9JQL5 133 aa7.07□□□□□ -1.28
DDX39A-220ENST00000593008 C11orf94C9JXX5 98 aa7.07□□□□□ -1.28
DDX39A-220ENST00000593008 H3BMM0 161 aa7.07□□□□□ -1.28
DDX39A-220ENST00000593008 J3KRW8 73 aa7.07□□□□□ -1.28
DDX39A-220ENST00000593008 HBE1P02100 147 aa7.07□□□□□ -1.28
DDX39A-220ENST00000593008 TCRAP04437 139 aa7.07□□□□□ -1.28
DDX39A-220ENST00000593008 GIG44P09565 113 aaPredicted RBP7.07□□□□□ -1.28
DDX39A-220ENST00000593008 HLA-DRB4P13762 266 aa7.07□□□□□ -1.28
DDX39A-220ENST00000593008 NUTF2P61970 127 aaKnown RBP7.07□□□□□ -1.28
DDX39A-220ENST00000593008 BLOC1S1P78537 153 aa7.07□□□□□ -1.28
DDX39A-220ENST00000593008 AMTNQ6UX39 209 aa7.07□□□□□ -1.28
DDX39A-220ENST00000593008 FOXI2Q6ZQN5 318 aa7.07□□□□□ -1.28
DDX39A-220ENST00000593008 Q6ZQT7 251 aa7.07□□□□□ -1.28
DDX39A-220ENST00000593008 ZNF767PQ75MW2 155 aa7.07□□□□□ -1.28
DDX39A-220ENST00000593008 RXFP4Q8TDU9 374 aa7.07□□□□□ -1.28
DDX39A-220ENST00000593008 DERL1Q9BUN8 251 aa7.07□□□□□ -1.28
DDX39A-220ENST00000593008 AAMDCQ9H7C9 122 aa7.07□□□□□ -1.28
DDX39A-220ENST00000593008 HLA-DRB4X5D2U9 266 aa7.07□□□□□ -1.28
DDX39A-220ENST00000593008 NPIPB6E9PJ23 425 aa7.06□□□□□ -1.28
DDX39A-220ENST00000593008 M0R2Z0 102 aa7.06□□□□□ -1.28
DDX39A-220ENST00000593008 PEX7O00628 323 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms