RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 LINC01546A6NGU7 62 aa9.05□□□□□ -0.96
ZNF540-210ENST00000592533 D6R8Y8 96 aa9.05□□□□□ -0.96
ZNF540-210ENST00000592533 NUDT3O95989 172 aa9.05□□□□□ -0.96
ZNF540-210ENST00000592533 IGLC6P0CF74 106 aa9.05□□□□□ -0.96
ZNF540-210ENST00000592533 IFI27P40305 119 aaPredicted RBP9.05□□□□□ -0.96
ZNF540-210ENST00000592533 CNFNQ9BYD5 112 aa9.05□□□□□ -0.96
ZNF540-210ENST00000592533 FAM90A27PA6NNH2 459 aa9.05□□□□□ -0.96
ZNF540-210ENST00000592533 IGHG4P01861 327 aa9.05□□□□□ -0.96
ZNF540-210ENST00000592533 CTSGP08311 255 aa9.05□□□□□ -0.96
ZNF540-210ENST00000592533 S100A7P31151 101 aa9.05□□□□□ -0.96
ZNF540-210ENST00000592533 LGALS9BQ3B8N2 356 aa9.05□□□□□ -0.96
ZNF540-210ENST00000592533 LGALS9CQ6DKI2 356 aa9.05□□□□□ -0.96
ZNF540-210ENST00000592533 ZNF575Q86XF7 245 aa9.05□□□□□ -0.96
ZNF540-210ENST00000592533 PRELID3AQ96N28 172 aa9.05□□□□□ -0.96
ZNF540-210ENST00000592533 EGR2P11161 476 aaPredicted RBP9.04□□□□□ -0.96
ZNF540-210ENST00000592533 C2orf91Q6ZV80 131 aa9.04□□□□□ -0.96
ZNF540-210ENST00000592533 OR1N2Q8NGR9 330 aa9.04□□□□□ -0.96
ZNF540-210ENST00000592533 SMAD5-AS1Q9Y6J3 95 aa9.04□□□□□ -0.96
ZNF540-210ENST00000592533 TMEM213A2RRL7 107 aa9.04□□□□□ -0.96
ZNF540-210ENST00000592533 NCR2O95944 276 aa9.04□□□□□ -0.96
ZNF540-210ENST00000592533 BMI1P35226 326 aa9.04□□□□□ -0.96
ZNF540-210ENST00000592533 MRPL51Q4U2R6 128 aaKnown RBP9.04□□□□□ -0.96
ZNF540-210ENST00000592533 VMO1Q7Z5L0 202 aa9.04□□□□□ -0.96
ZNF540-210ENST00000592533 PIP4P2Q8N4L2 257 aa9.04□□□□□ -0.96
ZNF540-210ENST00000592533 S4R3C0 116 aa9.04□□□□□ -0.96
ZNF540-210ENST00000592533 IGKV2-40A0A087WW87 121 aaPredicted RBP9.03□□□□□ -0.96
ZNF540-210ENST00000592533 A0A087X0K7 114 aa9.03□□□□□ -0.96
ZNF540-210ENST00000592533 CD5LO43866 347 aa9.03□□□□□ -0.96
ZNF540-210ENST00000592533 IGKV2D-40P01614 121 aaPredicted RBP9.03□□□□□ -0.96
ZNF540-210ENST00000592533 HES1Q14469 280 aa9.03□□□□□ -0.96
ZNF540-210ENST00000592533 DYNAPQ8N1N2 210 aa9.03□□□□□ -0.96
ZNF540-210ENST00000592533 RABAC1Q9UI14 185 aa9.03□□□□□ -0.96
ZNF540-210ENST00000592533 FAM106CPP0CH98 169 aa9.03□□□□□ -0.96
ZNF540-210ENST00000592533 FGF6P10767 208 aa9.03□□□□□ -0.96
ZNF540-210ENST00000592533 FAM106AQ4KMX7 169 aa9.03□□□□□ -0.96
ZNF540-210ENST00000592533 AMN1Q8IY45 258 aa9.03□□□□□ -0.96
ZNF540-210ENST00000592533 TPPP3Q9BW30 176 aa9.03□□□□□ -0.96
ZNF540-210ENST00000592533 TLN1Q9Y490 2541 aaKnown RBP9.03□□□□□ -0.96
ZNF540-210ENST00000592533 LOXL1Q08397 574 aaPredicted RBP9.02□□□□□ -0.96
ZNF540-210ENST00000592533 MCRIP2Q9BUT9 160 aaKnown RBP9.02□□□□□ -0.96
ZNF540-210ENST00000592533 IGHV7-81A0A0B4J1V7 117 aa9.02□□□□□ -0.97
ZNF540-210ENST00000592533 MUC21A0A0G2JKD1 596 aa9.02□□□□□ -0.97
ZNF540-210ENST00000592533 MUC21A0A140T8X8 626 aa9.02□□□□□ -0.97
ZNF540-210ENST00000592533 LY6HO94772 140 aa9.02□□□□□ -0.97
ZNF540-210ENST00000592533 GPR183P32249 361 aa9.02□□□□□ -0.97
ZNF540-210ENST00000592533 MUC21Q5SSG8 566 aa9.02□□□□□ -0.97
ZNF540-210ENST00000592533 FER1L6-AS1Q8NA97 138 aa9.02□□□□□ -0.97
ZNF540-210ENST00000592533 ZFHX2Q9C0A1 2572 aaPredicted RBP9.02□□□□□ -0.97
ZNF540-210ENST00000592533 DCHS2Q6V1P9 2916 aa9.02□□□□□ -0.97
ZNF540-210ENST00000592533 RBAKDNA6NC62 111 aa9.02□□□□□ -0.97
ZNF540-210ENST00000592533 HBDP02042 147 aa9.02□□□□□ -0.97
ZNF540-210ENST00000592533 RAB9AP51151 201 aa9.02□□□□□ -0.97
ZNF540-210ENST00000592533 OR2T8A6NH00 312 aa9.01□□□□□ -0.97
ZNF540-210ENST00000592533 ZNF80P51504 273 aaPredicted RBP9.01□□□□□ -0.97
ZNF540-210ENST00000592533 PTPRQQ9UMZ3 2332 aa9.01□□□□□ -0.97
ZNF540-210ENST00000592533 TACC2O95359 2948 aa9.01□□□□□ -0.97
ZNF540-210ENST00000592533 ADORA2A-AS1P86434 159 aa9.01□□□□□ -0.97
ZNF540-210ENST00000592533 DTX2Q86UW9 622 aa9.01□□□□□ -0.97
ZNF540-210ENST00000592533 FAM110DQ8TAY7 271 aaPredicted RBP9.01□□□□□ -0.97
ZNF540-210ENST00000592533 VGLL1Q99990 258 aa9.01□□□□□ -0.97
ZNF540-210ENST00000592533 MSRB2Q9Y3D2 182 aa9.01□□□□□ -0.97
ZNF540-210ENST00000592533 TPRP12270 2363 aaKnown RBP9.01□□□□□ -0.97
ZNF540-210ENST00000592533 H0Y8G0 127 aa9□□□□□ -0.97
ZNF540-210ENST00000592533 CCL21O00585 134 aa9□□□□□ -0.97
ZNF540-210ENST00000592533 PPBPP02775 128 aa9□□□□□ -0.97
ZNF540-210ENST00000592533 SEC11AP67812 179 aa9□□□□□ -0.97
ZNF540-210ENST00000592533 LINC01559Q495D7 138 aa9□□□□□ -0.97
ZNF540-210ENST00000592533 Q8N9W7 124 aa9□□□□□ -0.97
ZNF540-210ENST00000592533 ZNF502Q8TBZ5 544 aa9□□□□□ -0.97
ZNF540-210ENST00000592533 SIRPDQ9H106 197 aa9□□□□□ -0.97
ZNF540-210ENST00000592533 ZFAND3Q9H8U3 227 aa9□□□□□ -0.97
ZNF540-210ENST00000592533 NCBP2LA6PVI3 153 aaKnown RBP9□□□□□ -0.97
ZNF540-210ENST00000592533 TMEM11P17152 192 aa9□□□□□ -0.97
ZNF540-210ENST00000592533 RBX1P62877 108 aa9□□□□□ -0.97
ZNF540-210ENST00000592533 BOD1L2Q8IYS8 172 aa9□□□□□ -0.97
ZNF540-210ENST00000592533 RNASE8Q8TDE3 154 aaKnown RBP9□□□□□ -0.97
ZNF540-210ENST00000592533 HRNRQ86YZ3 2850 aaPredicted RBP9□□□□□ -0.97
ZNF540-210ENST00000592533 TMSB15BA0A087X1C1 80 aa9□□□□□ -0.97
ZNF540-210ENST00000592533 CDSNQ15517 529 aa9□□□□□ -0.97
ZNF540-210ENST00000592533 PIFOQ8TCI5 191 aa9□□□□□ -0.97
ZNF540-210ENST00000592533 RNF185Q96GF1 192 aa9□□□□□ -0.97
ZNF540-210ENST00000592533 SIVA1O15304 175 aa8.99□□□□□ -0.97
ZNF540-210ENST00000592533 NPYP01303 97 aa8.99□□□□□ -0.97
ZNF540-210ENST00000592533 OR4C5Q8NGB2 326 aa8.99□□□□□ -0.97
ZNF540-210ENST00000592533 ABCA4P78363 2273 aa8.99□□□□□ -0.97
ZNF540-210ENST00000592533 PRB4P10163 310 aaPredicted RBP8.99□□□□□ -0.97
ZNF540-210ENST00000592533 CKS2P33552 79 aa8.99□□□□□ -0.97
ZNF540-210ENST00000592533 FOXC1Q12948 553 aa8.99□□□□□ -0.97
ZNF540-210ENST00000592533 VAMP3Q15836 100 aa8.99□□□□□ -0.97
ZNF540-210ENST00000592533 ANKRD39Q53RE8 183 aa8.99□□□□□ -0.97
ZNF540-210ENST00000592533 OR8A1Q8NGG7 326 aa8.99□□□□□ -0.97
ZNF540-210ENST00000592533 Q8TAT8 98 aa8.99□□□□□ -0.97
ZNF540-210ENST00000592533 AJUBAQ96IF1 538 aa8.99□□□□□ -0.97
ZNF540-210ENST00000592533 LOC389332A0A1B0GUA5 103 aa8.98□□□□□ -0.97
ZNF540-210ENST00000592533 FABP5P3A8MUU1 101 aa8.98□□□□□ -0.97
ZNF540-210ENST00000592533 IGHV3-23P01764 117 aa8.98□□□□□ -0.97
ZNF540-210ENST00000592533 TWIST1Q15672 202 aa8.98□□□□□ -0.97
ZNF540-210ENST00000592533 PSMG4Q5JS54 123 aa8.98□□□□□ -0.97
ZNF540-210ENST00000592533 DCHS1Q96JQ0 3298 aa8.98□□□□□ -0.97
ZNF540-210ENST00000592533 BUB3O43684 328 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms