RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 OR7C2O60412 319 aa10.04□□□□□ -0.8
CLIP3-205ENST00000592017 INSP01308 110 aa10.04□□□□□ -0.8
CLIP3-205ENST00000592017 AMBPP02760 352 aa10.04□□□□□ -0.8
CLIP3-205ENST00000592017 EMP1P54849 157 aa10.04□□□□□ -0.8
CLIP3-205ENST00000592017 C1orf158Q8N1D5 194 aa10.04□□□□□ -0.8
CLIP3-205ENST00000592017 OR2T35Q8NGX2 323 aa10.04□□□□□ -0.8
CLIP3-205ENST00000592017 OR10J6PQ8NGY7 276 aa10.04□□□□□ -0.8
CLIP3-205ENST00000592017 IGF2BP2-AS1Q96M15 143 aa10.04□□□□□ -0.8
CLIP3-205ENST00000592017 AQP10Q96PS8 301 aa10.04□□□□□ -0.8
CLIP3-205ENST00000592017 PARD6GQ9BYG4 376 aaPredicted RBP10.04□□□□□ -0.8
CLIP3-205ENST00000592017 KLK5Q9Y337 293 aaPredicted RBP10.04□□□□□ -0.8
CLIP3-205ENST00000592017 KMT2AQ03164 3969 aa10.03□□□□□ -0.8
CLIP3-205ENST00000592017 DNAH10Q8IVF4 4471 aa10.03□□□□□ -0.8
CLIP3-205ENST00000592017 EIF3GO75821 320 aaKnown RBP eCLIP10.03□□□□□ -0.8
CLIP3-205ENST00000592017 LY6G6CO95867 125 aa10.03□□□□□ -0.8
CLIP3-205ENST00000592017 OR10J4P0C629 311 aa10.03□□□□□ -0.8
CLIP3-205ENST00000592017 ZNF266Q14584 549 aa10.03□□□□□ -0.8
CLIP3-205ENST00000592017 INO80EQ8NBZ0 244 aaPredicted RBP10.03□□□□□ -0.8
CLIP3-205ENST00000592017 FAM167A-AS1Q96KT0 104 aa10.03□□□□□ -0.8
CLIP3-205ENST00000592017 PAXXQ9BUH6 204 aa10.03□□□□□ -0.8
CLIP3-205ENST00000592017 OR51M1Q9H341 326 aa10.03□□□□□ -0.8
CLIP3-205ENST00000592017 CELA1Q9UNI1 258 aa10.03□□□□□ -0.8
CLIP3-205ENST00000592017 M0R3E3 92 aa10.02□□□□□ -0.81
CLIP3-205ENST00000592017 ZNF253O75346 499 aa10.02□□□□□ -0.81
CLIP3-205ENST00000592017 NDUFB4O95168 129 aa10.02□□□□□ -0.81
CLIP3-205ENST00000592017 HBE1P02100 147 aa10.02□□□□□ -0.81
CLIP3-205ENST00000592017 PDE6HQ13956 83 aa10.02□□□□□ -0.81
CLIP3-205ENST00000592017 ZNF767PQ75MW2 155 aa10.02□□□□□ -0.81
CLIP3-205ENST00000592017 EXOC3-AS1Q8N2X6 119 aa10.02□□□□□ -0.81
CLIP3-205ENST00000592017 HSD17B11Q8NBQ5 300 aa10.02□□□□□ -0.81
CLIP3-205ENST00000592017 NEU1Q99519 415 aa10.02□□□□□ -0.81
CLIP3-205ENST00000592017 AAMDCQ9H7C9 122 aa10.02□□□□□ -0.81
CLIP3-205ENST00000592017 LOC102723971A0A1B0GUV8 181 aa10.01□□□□□ -0.81
CLIP3-205ENST00000592017 SMIM9A6NGZ8 99 aa10.01□□□□□ -0.81
CLIP3-205ENST00000592017 J3KRW8 73 aa10.01□□□□□ -0.81
CLIP3-205ENST00000592017 CRXO43186 299 aaPredicted RBP10.01□□□□□ -0.81
CLIP3-205ENST00000592017 UBE2L3P68036 154 aaKnown RBP10.01□□□□□ -0.81
CLIP3-205ENST00000592017 RRN3P1Q2M238 152 aa10.01□□□□□ -0.81
CLIP3-205ENST00000592017 ACOT6Q3I5F7 207 aaPredicted RBP10.01□□□□□ -0.81
CLIP3-205ENST00000592017 KHDC3LQ587J8 217 aa10.01□□□□□ -0.81
CLIP3-205ENST00000592017 FAM122CQ6P4D5 195 aa10.01□□□□□ -0.81
CLIP3-205ENST00000592017 FXYD5Q96DB9 178 aa10.01□□□□□ -0.81
CLIP3-205ENST00000592017 RNF222A6NCQ9 220 aa10□□□□□ -0.81
CLIP3-205ENST00000592017 NBEAP1P0C6P0 100 aa10□□□□□ -0.81
CLIP3-205ENST00000592017 M6PRP20645 277 aa10□□□□□ -0.81
CLIP3-205ENST00000592017 CDKN1BP46527 198 aa10□□□□□ -0.81
CLIP3-205ENST00000592017 TAS2R45P59539 299 aa10□□□□□ -0.81
CLIP3-205ENST00000592017 RAB2AP61019 212 aa10□□□□□ -0.81
CLIP3-205ENST00000592017 ICAM4Q14773 271 aa10□□□□□ -0.81
CLIP3-205ENST00000592017 Q6ZTC4 211 aa10□□□□□ -0.81
CLIP3-205ENST00000592017 RPP25LQ8N5L8 163 aaKnown RBP10□□□□□ -0.81
CLIP3-205ENST00000592017 RNF141Q8WVD5 230 aa10□□□□□ -0.81
CLIP3-205ENST00000592017 MRPL53Q96EL3 112 aaKnown RBP10□□□□□ -0.81
CLIP3-205ENST00000592017 PHYHIPLQ96FC7 376 aa10□□□□□ -0.81
CLIP3-205ENST00000592017 TNFSF18Q9UNG2 199 aa10□□□□□ -0.81
CLIP3-205ENST00000592017 PRELID1Q9Y255 219 aa10□□□□□ -0.81
CLIP3-205ENST00000592017 A0A1W2PPV4 95 aa9.99□□□□□ -0.81
CLIP3-205ENST00000592017 TMEM189A5PLL7 270 aa9.99□□□□□ -0.81
CLIP3-205ENST00000592017 ZNF705GA8MUZ8 300 aaPredicted RBP9.99□□□□□ -0.81
CLIP3-205ENST00000592017 SMLR1H3BR10 107 aa9.99□□□□□ -0.81
CLIP3-205ENST00000592017 PRM2P04554 102 aa9.99□□□□□ -0.81
CLIP3-205ENST00000592017 ATP6V0CP27449 155 aa9.99□□□□□ -0.81
CLIP3-205ENST00000592017 ERCC8Q13216 396 aa9.99□□□□□ -0.81
CLIP3-205ENST00000592017 ZNF503Q96F45 646 aa9.99□□□□□ -0.81
CLIP3-205ENST00000592017 LINC01587Q99440 93 aa9.99□□□□□ -0.81
CLIP3-205ENST00000592017 IGKV2-40A0A087WW87 121 aaPredicted RBP9.98□□□□□ -0.81
CLIP3-205ENST00000592017 NPIPB6E9PJ23 425 aa9.98□□□□□ -0.81
CLIP3-205ENST00000592017 G3V3Q6 166 aa9.98□□□□□ -0.81
CLIP3-205ENST00000592017 HMGB3O15347 200 aaKnown RBP9.98□□□□□ -0.81
CLIP3-205ENST00000592017 ARPC5O15511 151 aa9.98□□□□□ -0.81
CLIP3-205ENST00000592017 IGKV2D-40P01614 121 aaPredicted RBP9.98□□□□□ -0.81
CLIP3-205ENST00000592017 SPART-AS1P0CW21 52 aa9.98□□□□□ -0.81
CLIP3-205ENST00000592017 HTN1P15515 57 aa9.98□□□□□ -0.81
CLIP3-205ENST00000592017 TSPOP30536 169 aa9.98□□□□□ -0.81
CLIP3-205ENST00000592017 KIR3DS1Q14943 382 aa9.98□□□□□ -0.81
CLIP3-205ENST00000592017 OR10G4Q8NGN3 311 aa9.98□□□□□ -0.81
CLIP3-205ENST00000592017 OR10G9Q8NGN4 311 aa9.98□□□□□ -0.81
CLIP3-205ENST00000592017 OR10G7Q8NGN6 311 aa9.98□□□□□ -0.81
CLIP3-205ENST00000592017 SH3BGRL3Q9H299 93 aa9.98□□□□□ -0.81
CLIP3-205ENST00000592017 YTHDF2Q9Y5A9 579 aaKnown RBP9.98□□□□□ -0.81
CLIP3-205ENST00000592017 BORCS7-ASMTA0A0B4J1R7 106 aa9.97□□□□□ -0.81
CLIP3-205ENST00000592017 C11orf94C9JXX5 98 aa9.97□□□□□ -0.81
CLIP3-205ENST00000592017 CT45A10P0DMU9 189 aa9.97□□□□□ -0.81
CLIP3-205ENST00000592017 LEPP41159 167 aa9.97□□□□□ -0.81
CLIP3-205ENST00000592017 CDC34P49427 236 aaPredicted RBP9.97□□□□□ -0.81
CLIP3-205ENST00000592017 RANP62826 216 aaKnown RBP9.97□□□□□ -0.81
CLIP3-205ENST00000592017 C12orf74Q32Q52 190 aa9.97□□□□□ -0.81
CLIP3-205ENST00000592017 FAM222AQ5U5X8 452 aa9.97□□□□□ -0.81
CLIP3-205ENST00000592017 GFI1BQ5VTD9 330 aa9.97□□□□□ -0.81
CLIP3-205ENST00000592017 RPL7L1Q6DKI1 246 aaKnown RBP9.97□□□□□ -0.81
CLIP3-205ENST00000592017 C2CD4CQ8TF44 421 aa9.97□□□□□ -0.81
CLIP3-205ENST00000592017 PSMG3Q9BT73 122 aaPredicted RBP9.97□□□□□ -0.81
CLIP3-205ENST00000592017 Q9H3A6 140 aa9.97□□□□□ -0.81
CLIP3-205ENST00000592017 TRAV10A0A0B4J240 114 aa9.96□□□□□ -0.82
CLIP3-205ENST00000592017 IGLL5B9A064 214 aa9.96□□□□□ -0.82
CLIP3-205ENST00000592017 LGALS9CQ6DKI2 356 aa9.96□□□□□ -0.82
CLIP3-205ENST00000592017 TMEM256Q8N2U0 113 aa9.96□□□□□ -0.82
CLIP3-205ENST00000592017 OR2G3Q8NGZ4 309 aa9.96□□□□□ -0.82
CLIP3-205ENST00000592017 DKK2Q9UBU2 259 aa9.96□□□□□ -0.82
CLIP3-205ENST00000592017 FRAS1Q86XX4 4008 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 205.4 ms