RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 OR2D3Q8NGH3 330 aa7.99□□□□□ -1.13
VPS25-206ENST00000591584 GLMPQ8WWB7 406 aa7.99□□□□□ -1.13
VPS25-206ENST00000591584 BORCS7Q96B45 105 aa7.99□□□□□ -1.13
VPS25-206ENST00000591584 NOL4LQ96MY1 436 aaPredicted RBP7.99□□□□□ -1.13
VPS25-206ENST00000591584 PRR25Q96S07 402 aa7.99□□□□□ -1.13
VPS25-206ENST00000591584 HIST1H2BLQ99880 126 aa7.99□□□□□ -1.13
VPS25-206ENST00000591584 LENEPQ9Y5L5 61 aa7.99□□□□□ -1.13
VPS25-206ENST00000591584 IGHV3-35A0A0C4DH35 117 aa7.98□□□□□ -1.13
VPS25-206ENST00000591584 A0A1B0GXF2 115 aa7.98□□□□□ -1.13
VPS25-206ENST00000591584 CA1P00915 261 aaPredicted RBP7.98□□□□□ -1.13
VPS25-206ENST00000591584 FABP4P15090 132 aa7.98□□□□□ -1.13
VPS25-206ENST00000591584 GFI1BQ5VTD9 330 aa7.98□□□□□ -1.13
VPS25-206ENST00000591584 MRPL54Q6P161 138 aaKnown RBP7.98□□□□□ -1.13
VPS25-206ENST00000591584 LINC00322Q6ZN03 302 aaPredicted RBP7.98□□□□□ -1.13
VPS25-206ENST00000591584 KRTAP1-3Q8IUG1 177 aa7.98□□□□□ -1.13
VPS25-206ENST00000591584 OR10D4PQ8NGN7 298 aa7.98□□□□□ -1.13
VPS25-206ENST00000591584 ZC2HC1AQ96GY0 325 aa7.98□□□□□ -1.13
VPS25-206ENST00000591584 UFC1Q9Y3C8 167 aa7.98□□□□□ -1.13
VPS25-206ENST00000591584 TMEM189A5PLL7 270 aa7.97□□□□□ -1.13
VPS25-206ENST00000591584 FABP5P3A8MUU1 101 aa7.97□□□□□ -1.13
VPS25-206ENST00000591584 OVOL1O14753 267 aa7.97□□□□□ -1.13
VPS25-206ENST00000591584 SCGB2A2Q13296 93 aa7.97□□□□□ -1.13
VPS25-206ENST00000591584 KLF5Q13887 457 aaPredicted RBP7.97□□□□□ -1.13
VPS25-206ENST00000591584 BAGE3Q86Y29 109 aa7.97□□□□□ -1.13
VPS25-206ENST00000591584 Q8N2B8 174 aa7.97□□□□□ -1.13
VPS25-206ENST00000591584 RNF152Q8N8N0 203 aa7.97□□□□□ -1.13
VPS25-206ENST00000591584 GATD1Q8NB37 220 aa7.97□□□□□ -1.13
VPS25-206ENST00000591584 C16orf92Q96LL3 132 aa7.97□□□□□ -1.13
VPS25-206ENST00000591584 ASCL2Q99929 193 aa7.97□□□□□ -1.13
VPS25-206ENST00000591584 FOXC2Q99958 501 aa7.97□□□□□ -1.13
VPS25-206ENST00000591584 KLK15Q9H2R5 256 aa7.97□□□□□ -1.13
VPS25-206ENST00000591584 DAZ1Q9NQZ3 744 aaKnown RBP7.97□□□□□ -1.13
VPS25-206ENST00000591584 ZNF462Q96JM2 2506 aa7.96□□□□□ -1.13
VPS25-206ENST00000591584 USP9XQ93008 2570 aaPredicted RBP7.96□□□□□ -1.13
VPS25-206ENST00000591584 ABCA2Q9BZC7 2435 aa7.96□□□□□ -1.14
VPS25-206ENST00000591584 IGHV7-4-1A0A0J9YVY3 117 aa7.96□□□□□ -1.14
VPS25-206ENST00000591584 TRBV7-9A0A0J9YWB2 115 aa7.96□□□□□ -1.14
VPS25-206ENST00000591584 A0A1B0GUT8 65 aa7.96□□□□□ -1.14
VPS25-206ENST00000591584 SPINK4O60575 86 aa7.96□□□□□ -1.14
VPS25-206ENST00000591584 AMBPP02760 352 aa7.96□□□□□ -1.14
VPS25-206ENST00000591584 JOSD1Q15040 202 aaPredicted RBP7.96□□□□□ -1.14
VPS25-206ENST00000591584 TMEM78Q5T7P6 136 aa7.96□□□□□ -1.14
VPS25-206ENST00000591584 C9orf47Q6ZRZ4 202 aa7.96□□□□□ -1.14
VPS25-206ENST00000591584 Q6ZS46 218 aa7.96□□□□□ -1.14
VPS25-206ENST00000591584 C8orf86Q6ZUL3 223 aa7.96□□□□□ -1.14
VPS25-206ENST00000591584 MAPK1IP1LQ8NDC0 245 aa7.96□□□□□ -1.14
VPS25-206ENST00000591584 GTSF1Q8WW33 167 aa7.96□□□□□ -1.14
VPS25-206ENST00000591584 UBE2E2Q96LR5 201 aa7.96□□□□□ -1.14
VPS25-206ENST00000591584 LINC00477Q96M19 166 aa7.96□□□□□ -1.14
VPS25-206ENST00000591584 CFAP46Q8IYW2 2715 aa7.96□□□□□ -1.14
VPS25-206ENST00000591584 IGKV2-40A0A087WW87 121 aaPredicted RBP7.95□□□□□ -1.14
VPS25-206ENST00000591584 TRAV8-2A0A0B4J237 113 aa7.95□□□□□ -1.14
VPS25-206ENST00000591584 LGALS9O00182 355 aa7.95□□□□□ -1.14
VPS25-206ENST00000591584 IGKV2D-40P01614 121 aaPredicted RBP7.95□□□□□ -1.14
VPS25-206ENST00000591584 IGHV3-11P01762 117 aa7.95□□□□□ -1.14
VPS25-206ENST00000591584 APOHP02749 345 aaPredicted RBP7.95□□□□□ -1.14
VPS25-206ENST00000591584 ID1P41134 155 aa7.95□□□□□ -1.14
VPS25-206ENST00000591584 CRIP1P50238 77 aa7.95□□□□□ -1.14
VPS25-206ENST00000591584 ZNF138P52744 262 aa7.95□□□□□ -1.14
VPS25-206ENST00000591584 HIST1H1AQ02539 215 aaPredicted RBP7.95□□□□□ -1.14
VPS25-206ENST00000591584 PDZD11Q5EBL8 140 aa7.95□□□□□ -1.14
VPS25-206ENST00000591584 TCF24Q7RTU0 167 aa7.95□□□□□ -1.14
VPS25-206ENST00000591584 MYOZ3Q8TDC0 251 aa7.95□□□□□ -1.14
VPS25-206ENST00000591584 WFDC12Q8WWY7 111 aa7.95□□□□□ -1.14
VPS25-206ENST00000591584 PGLYRP4Q96LB8 373 aa7.95□□□□□ -1.14
VPS25-206ENST00000591584 NIT2Q9NQR4 276 aa7.95□□□□□ -1.14
VPS25-206ENST00000591584 SMPXQ9UHP9 88 aa7.95□□□□□ -1.14
VPS25-206ENST00000591584 LRBAP50851 2863 aa7.95□□□□□ -1.14
VPS25-206ENST00000591584 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.94□□□□□ -1.143e-7■■■□□ 17.2
VPS25-206ENST00000591584 IGHV3OR16-8A0A075B7F1 116 aa7.94□□□□□ -1.14
VPS25-206ENST00000591584 HOXA3O43365 443 aaPredicted RBP7.94□□□□□ -1.14
VPS25-206ENST00000591584 SH2D1AO60880 128 aa7.94□□□□□ -1.14
VPS25-206ENST00000591584 LGALS1P09382 135 aaKnown RBP7.94□□□□□ -1.14
VPS25-206ENST00000591584 SRIP30626 198 aa7.94□□□□□ -1.14
VPS25-206ENST00000591584 CAMPP49913 170 aa7.94□□□□□ -1.14
VPS25-206ENST00000591584 PYY3Q5JQD4 70 aa7.94□□□□□ -1.14
VPS25-206ENST00000591584 UNQ9165/PRO28630Q6UXU0 137 aa7.94□□□□□ -1.14
VPS25-206ENST00000591584 REC114Q7Z4M0 266 aa7.94□□□□□ -1.14
VPS25-206ENST00000591584 C8orf49Q96NF6 230 aa7.94□□□□□ -1.14
VPS25-206ENST00000591584 VGLL1Q99990 258 aa7.94□□□□□ -1.14
VPS25-206ENST00000591584 ZNF702PQ9H963 129 aa7.94□□□□□ -1.14
VPS25-206ENST00000591584 NRN1Q9NPD7 142 aa7.94□□□□□ -1.14
VPS25-206ENST00000591584 SPG11Q96JI7 2443 aa7.93□□□□□ -1.14
VPS25-206ENST00000591584 PRRC2AP48634 2157 aaKnown RBP7.93□□□□□ -1.14
VPS25-206ENST00000591584 IGHV3-66A0A0C4DH42 116 aa7.93□□□□□ -1.14
VPS25-206ENST00000591584 ZNF705FA8MVS1 300 aaPredicted RBP7.93□□□□□ -1.14
VPS25-206ENST00000591584 F2Z2F3 143 aa7.93□□□□□ -1.14
VPS25-206ENST00000591584 ZNF207O43670 478 aaKnown RBP7.93□□□□□ -1.14
VPS25-206ENST00000591584 TRBV12-3P01733 135 aa7.93□□□□□ -1.14
VPS25-206ENST00000591584 RAB4AP20338 218 aa7.93□□□□□ -1.14
VPS25-206ENST00000591584 LINC01559Q495D7 138 aa7.93□□□□□ -1.14
VPS25-206ENST00000591584 ZNF493Q6ZR52 646 aa7.93□□□□□ -1.14
VPS25-206ENST00000591584 RHPN1-AS1Q9BWJ2 59 aa7.93□□□□□ -1.14
VPS25-206ENST00000591584 AGPAT4-IT1Q9H0P7 198 aa7.93□□□□□ -1.14
VPS25-206ENST00000591584 IGHV3OR16-13A0A075B7E8 117 aa7.92□□□□□ -1.14
VPS25-206ENST00000591584 IGHV3-74A0A0B4J1X5 117 aa7.92□□□□□ -1.14
VPS25-206ENST00000591584 GRIFINA4D1Z8 144 aa7.92□□□□□ -1.14
VPS25-206ENST00000591584 SOCS3O14543 225 aa7.92□□□□□ -1.14
VPS25-206ENST00000591584 SMAD7O15105 426 aaKnown RBP7.92□□□□□ -1.14
VPS25-206ENST00000591584 CD5LO43866 347 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms