RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 RPL35AP18077 110 aaKnown RBP4.76□□□□□ -1.65
VPS4B-205ENST00000591383 M6PRP20645 277 aa4.76□□□□□ -1.65
VPS4B-205ENST00000591383 CDC34P49427 236 aaPredicted RBP4.76□□□□□ -1.65
VPS4B-205ENST00000591383 MEOX2P50222 304 aa4.76□□□□□ -1.65
VPS4B-205ENST00000591383 NKX2-5P52952 324 aaPredicted RBP4.76□□□□□ -1.65
VPS4B-205ENST00000591383 DEFB131AP59861 70 aa4.76□□□□□ -1.65
VPS4B-205ENST00000591383 SNRPD3P62318 126 aaKnown RBP4.76□□□□□ -1.65
VPS4B-205ENST00000591383 RHOBP62745 196 aa4.76□□□□□ -1.65
VPS4B-205ENST00000591383 KHDC3LQ587J8 217 aa4.76□□□□□ -1.65
VPS4B-205ENST00000591383 TMEM41BQ5BJD5 291 aa4.76□□□□□ -1.65
VPS4B-205ENST00000591383 DEFB121Q5J5C9 76 aa4.76□□□□□ -1.65
VPS4B-205ENST00000591383 AKR1C8PQ5T2L2 129 aa4.76□□□□□ -1.65
VPS4B-205ENST00000591383 PET117Q6UWS5 81 aa4.76□□□□□ -1.65
VPS4B-205ENST00000591383 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.76□□□□□ -1.65
VPS4B-205ENST00000591383 BPIFA4PQ86YQ2 179 aa4.76□□□□□ -1.65
VPS4B-205ENST00000591383 APRG1Q8IVJ8 170 aa4.76□□□□□ -1.65
VPS4B-205ENST00000591383 OR2G3Q8NGZ4 309 aa4.76□□□□□ -1.65
VPS4B-205ENST00000591383 HYLS1Q96M11 299 aa4.76□□□□□ -1.65
VPS4B-205ENST00000591383 LINC00052Q96N35 136 aa4.76□□□□□ -1.65
VPS4B-205ENST00000591383 PSMG3Q9BT73 122 aaPredicted RBP4.76□□□□□ -1.65
VPS4B-205ENST00000591383 FUT9Q9Y231 359 aa4.76□□□□□ -1.65
VPS4B-205ENST00000591383 SMAD5-AS1Q9Y6J3 95 aa4.76□□□□□ -1.65
VPS4B-205ENST00000591383 TGP01266 2768 aa4.76□□□□□ -1.65
VPS4B-205ENST00000591383 A0A087X0K7 114 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 A0A1W2PPV4 95 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 KNCNA6PVL3 124 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 BOLA2-SMG1P6H3BVE0 249 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 SLC17A3O00476 420 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 HMGB3O15347 200 aaKnown RBP4.75□□□□□ -1.65
VPS4B-205ENST00000591383 OR10J4P0C629 311 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 FRMD6-AS1P0C7T7 363 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 PRB4P10163 310 aaPredicted RBP4.75□□□□□ -1.65
VPS4B-205ENST00000591383 TPT1P13693 172 aaKnown RBP4.75□□□□□ -1.65
VPS4B-205ENST00000591383 C4BPBP20851 252 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 ID1P41134 155 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 PSMB3P49720 205 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 TAS2R45P59539 299 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 SAMD13Q5VXD3 122 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 IGFL4Q6B9Z1 124 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 LCN15Q6UWW0 184 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 C9orf62Q8N4C0 152 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 RNF182Q8N6D2 247 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 ZNF738Q8NE65 137 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 OR10G4Q8NGN3 311 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 OR10G9Q8NGN4 311 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 OR10G7Q8NGN6 311 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 DCANP1Q8TF63 244 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 BLNKQ8WV28 456 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 TMED6Q8WW62 240 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 SLC25A2Q9BXI2 301 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 AAMDCQ9H7C9 122 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 CYTL1Q9NRR1 136 aa4.75□□□□□ -1.65
VPS4B-205ENST00000591383 A0A1B0GV50 99 aa4.74□□□□□ -1.65
VPS4B-205ENST00000591383 ISLRO14498 428 aa4.74□□□□□ -1.65
VPS4B-205ENST00000591383 SOCS3O14543 225 aa4.74□□□□□ -1.65
VPS4B-205ENST00000591383 VCYO14598 125 aa4.74□□□□□ -1.65
VPS4B-205ENST00000591383 MBP02144 154 aa4.74□□□□□ -1.65
VPS4B-205ENST00000591383 ARL14EPLP0DKL9 152 aa4.74□□□□□ -1.65
VPS4B-205ENST00000591383 IGLC2P0DOY2 106 aa4.74□□□□□ -1.65
VPS4B-205ENST00000591383 HLA-DMBP28068 263 aa4.74□□□□□ -1.65
VPS4B-205ENST00000591383 DEFB1P60022 68 aa4.74□□□□□ -1.65
VPS4B-205ENST00000591383 EIF5AP63241 154 aaKnown RBP4.74□□□□□ -1.65
VPS4B-205ENST00000591383 LGALSLQ3ZCW2 172 aaPredicted RBP4.74□□□□□ -1.65
VPS4B-205ENST00000591383 ACTL10Q5JWF8 245 aa4.74□□□□□ -1.65
VPS4B-205ENST00000591383 XP32Q5T750 250 aa4.74□□□□□ -1.65
VPS4B-205ENST00000591383 SUMO4Q6EEV6 95 aa4.74□□□□□ -1.65
VPS4B-205ENST00000591383 PQLC2Q6ZP29 291 aa4.74□□□□□ -1.65
VPS4B-205ENST00000591383 STHQ8IWL8 128 aa4.74□□□□□ -1.65
VPS4B-205ENST00000591383 FAM213BQ8TBF2 198 aa4.74□□□□□ -1.65
VPS4B-205ENST00000591383 PHYHIPLQ96FC7 376 aa4.74□□□□□ -1.65
VPS4B-205ENST00000591383 ASCL2Q99929 193 aa4.74□□□□□ -1.65
VPS4B-205ENST00000591383 SLC50A1Q9BRV3 221 aa4.74□□□□□ -1.65
VPS4B-205ENST00000591383 PAXXQ9BUH6 204 aa4.74□□□□□ -1.65
VPS4B-205ENST00000591383 COL7A1Q02388 2944 aa4.74□□□□□ -1.65
VPS4B-205ENST00000591383 TENM3Q9P273 2699 aa4.74□□□□□ -1.65
VPS4B-205ENST00000591383 STAB2Q8WWQ8 2551 aa4.73□□□□□ -1.65
VPS4B-205ENST00000591383 NBEAL2Q6ZNJ1 2754 aa4.73□□□□□ -1.65
VPS4B-205ENST00000591383 TRAV8-2A0A0B4J237 113 aa4.73□□□□□ -1.65
VPS4B-205ENST00000591383 TRAV34A0A0B4J273 112 aa4.73□□□□□ -1.65
VPS4B-205ENST00000591383 MAP1LC3B2A6NCE7 125 aa4.73□□□□□ -1.65
VPS4B-205ENST00000591383 F6UB75 175 aa4.73□□□□□ -1.65
VPS4B-205ENST00000591383 H3BQ15 152 aa4.73□□□□□ -1.65
VPS4B-205ENST00000591383 MRPS12O15235 138 aaKnown RBP4.73□□□□□ -1.65
VPS4B-205ENST00000591383 IGKV3-20P01619 116 aa4.73□□□□□ -1.65
VPS4B-205ENST00000591383 HIST1H1EP10412 219 aaKnown RBP4.73□□□□□ -1.65
VPS4B-205ENST00000591383 SPP1P10451 314 aa4.73□□□□□ -1.65
VPS4B-205ENST00000591383 CMC4P56277 68 aaPredicted RBP4.73□□□□□ -1.65
VPS4B-205ENST00000591383 SERF2P84101 59 aa4.73□□□□□ -1.65
VPS4B-205ENST00000591383 GUK1Q16774 197 aa4.73□□□□□ -1.65
VPS4B-205ENST00000591383 SSX7Q7RTT5 188 aa4.73□□□□□ -1.65
VPS4B-205ENST00000591383 SLC51BQ86UW2 128 aa4.73□□□□□ -1.65
VPS4B-205ENST00000591383 BAP18Q8IXM2 172 aa4.73□□□□□ -1.65
VPS4B-205ENST00000591383 STOML3Q8TAV4 291 aa4.73□□□□□ -1.65
VPS4B-205ENST00000591383 FAM167A-AS1Q96KT0 104 aa4.73□□□□□ -1.65
VPS4B-205ENST00000591383 C17orf77Q96MU5 243 aa4.73□□□□□ -1.65
VPS4B-205ENST00000591383 ACTR3CQ9C0K3 210 aaPredicted RBP4.73□□□□□ -1.65
VPS4B-205ENST00000591383 MAP1LC3BQ9GZQ8 125 aa4.73□□□□□ -1.65
VPS4B-205ENST00000591383 OR51M1Q9H341 326 aa4.73□□□□□ -1.65
VPS4B-205ENST00000591383 RETNQ9HD89 108 aa4.73□□□□□ -1.65
VPS4B-205ENST00000591383 RPRMQ9NS64 109 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms