RNA–Protein interactions for RNA: ENST00000591304.1

CLPTM1-212, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-212ENST00000591304 MRPL53Q96EL3 112 aaKnown RBP16.66■□□□□ 0.26
CLPTM1-212ENST00000591304 NIPSNAP3BQ9BS92 247 aa16.66■□□□□ 0.26
CLPTM1-212ENST00000591304 ZNF586Q9NXT0 402 aa16.66■□□□□ 0.26
CLPTM1-212ENST00000591304 APLNQ9ULZ1 77 aa16.66■□□□□ 0.26
CLPTM1-212ENST00000591304 HSPB11Q9Y547 144 aa16.66■□□□□ 0.26
CLPTM1-212ENST00000591304 TRBV19A0A075B6N1 114 aa16.65■□□□□ 0.26
CLPTM1-212ENST00000591304 RPL12P30050 165 aaKnown RBP16.65■□□□□ 0.26
CLPTM1-212ENST00000591304 FAM222AQ5U5X8 452 aa16.65■□□□□ 0.26
CLPTM1-212ENST00000591304 ZNF767PQ75MW2 155 aa16.65■□□□□ 0.26
CLPTM1-212ENST00000591304 BAP18Q8IXM2 172 aa16.65■□□□□ 0.26
CLPTM1-212ENST00000591304 C20orf144Q9BQM9 153 aa16.65■□□□□ 0.26
CLPTM1-212ENST00000591304 MRPL32Q9BYC8 188 aaKnown RBP16.65■□□□□ 0.26
CLPTM1-212ENST00000591304 PRELID1Q9Y255 219 aa16.65■□□□□ 0.26
CLPTM1-212ENST00000591304 YTHDF2Q9Y5A9 579 aaKnown RBP16.65■□□□□ 0.26
CLPTM1-212ENST00000591304 TIMM9Q9Y5J7 89 aa16.65■□□□□ 0.26
CLPTM1-212ENST00000591304 IGHV4-4A0A075B6R2 117 aa16.64■□□□□ 0.25
CLPTM1-212ENST00000591304 TRAV12-2A0A075B6T6 113 aa16.64■□□□□ 0.25
CLPTM1-212ENST00000591304 IFNA5P01569 189 aa16.64■□□□□ 0.25
CLPTM1-212ENST00000591304 MBD2Q9UBB5 411 aa16.64■□□□□ 0.25
CLPTM1-212ENST00000591304 ALG5Q9Y673 324 aa16.64■□□□□ 0.25
CLPTM1-212ENST00000591304 GCSAMLQ5JQS6 135 aa16.63■□□□□ 0.25
CLPTM1-212ENST00000591304 SCGB1C1Q8TD33 95 aa16.63■□□□□ 0.25
CLPTM1-212ENST00000591304 LINC01587Q99440 93 aa16.63■□□□□ 0.25
CLPTM1-212ENST00000591304 TAS2R60P59551 318 aa16.62■□□□□ 0.25
CLPTM1-212ENST00000591304 RPP25LQ8N5L8 163 aaKnown RBP16.62■□□□□ 0.25
CLPTM1-212ENST00000591304 FAM210BQ96KR6 192 aa16.62■□□□□ 0.25
CLPTM1-212ENST00000591304 ODF3Q96PU9 254 aa16.62■□□□□ 0.25
CLPTM1-212ENST00000591304 AAMDCQ9H7C9 122 aa16.62■□□□□ 0.25
CLPTM1-212ENST00000591304 NDUFAF3Q9BU61 184 aa16.61■□□□□ 0.25
CLPTM1-212ENST00000591304 SLC25A2Q9BXI2 301 aa16.61■□□□□ 0.25
CLPTM1-212ENST00000591304 LYRM9A8MSI8 78 aa16.6■□□□□ 0.25
CLPTM1-212ENST00000591304 ZNF705GA8MUZ8 300 aaPredicted RBP16.6■□□□□ 0.25
CLPTM1-212ENST00000591304 PRAC2D3DTV9 90 aa16.6■□□□□ 0.25
CLPTM1-212ENST00000591304 NPIPB6E9PJ23 425 aa16.6■□□□□ 0.25
CLPTM1-212ENST00000591304 H7BYZ3 331 aa16.6■□□□□ 0.25
CLPTM1-212ENST00000591304 PARD6GQ9BYG4 376 aaPredicted RBP16.6■□□□□ 0.25
CLPTM1-212ENST00000591304 MED28Q9H204 178 aa16.6■□□□□ 0.25
CLPTM1-212ENST00000591304 OR51M1Q9H341 326 aa16.6■□□□□ 0.25
CLPTM1-212ENST00000591304 FUT9Q9Y231 359 aa16.6■□□□□ 0.25
CLPTM1-212ENST00000591304 NDUFB4O95168 129 aa16.59■□□□□ 0.25
CLPTM1-212ENST00000591304 PYYP10082 97 aa16.59■□□□□ 0.25
CLPTM1-212ENST00000591304 LEPP41159 167 aa16.59■□□□□ 0.25
CLPTM1-212ENST00000591304 DAD1P61803 113 aa16.59■□□□□ 0.25
CLPTM1-212ENST00000591304 ZNF493Q6ZR52 646 aa16.59■□□□□ 0.25
CLPTM1-212ENST00000591304 MIR17HGQ75NE6 70 aa16.59■□□□□ 0.25
CLPTM1-212ENST00000591304 BLNKQ8WV28 456 aa16.59■□□□□ 0.25
CLPTM1-212ENST00000591304 C16orf74Q96GX8 76 aa16.59■□□□□ 0.25
CLPTM1-212ENST00000591304 NBEAP1P0C6P0 100 aa16.58■□□□□ 0.24
CLPTM1-212ENST00000591304 ASB13Q8WXK3 278 aa16.58■□□□□ 0.24
CLPTM1-212ENST00000591304 FAM167A-AS1Q96KT0 104 aa16.58■□□□□ 0.24
CLPTM1-212ENST00000591304 SMIM3Q9BZL3 60 aa16.58■□□□□ 0.24
CLPTM1-212ENST00000591304 FFAR4Q5NUL3 377 aa16.57■□□□□ 0.24
CLPTM1-212ENST00000591304 PAXXQ9BUH6 204 aa16.57■□□□□ 0.24
CLPTM1-212ENST00000591304 PRB4P10163 310 aaPredicted RBP16.56■□□□□ 0.24
CLPTM1-212ENST00000591304 LINC00477Q96M19 166 aa16.56■□□□□ 0.24
CLPTM1-212ENST00000591304 M0R3E3 92 aa16.55■□□□□ 0.24
CLPTM1-212ENST00000591304 CT45A10P0DMU9 189 aa16.55■□□□□ 0.24
CLPTM1-212ENST00000591304 HTN1P15515 57 aa16.55■□□□□ 0.24
CLPTM1-212ENST00000591304 TAS2R45P59539 299 aa16.55■□□□□ 0.24
CLPTM1-212ENST00000591304 TMEM263Q8WUH6 116 aaKnown RBP16.55■□□□□ 0.24
CLPTM1-212ENST00000591304 RNF141Q8WVD5 230 aa16.55■□□□□ 0.24
CLPTM1-212ENST00000591304 OR7C2O60412 319 aa16.54■□□□□ 0.24
CLPTM1-212ENST00000591304 PRM2P04554 102 aa16.54■□□□□ 0.24
CLPTM1-212ENST00000591304 P0DMU3 169 aa16.54■□□□□ 0.24
CLPTM1-212ENST00000591304 FAM231AP0DMU4 169 aa16.54■□□□□ 0.24
CLPTM1-212ENST00000591304 FAM231CP0DMU5 169 aa16.54■□□□□ 0.24
CLPTM1-212ENST00000591304 AZU1P20160 251 aa16.54■□□□□ 0.24
CLPTM1-212ENST00000591304 ICAM4Q14773 271 aa16.54■□□□□ 0.24
CLPTM1-212ENST00000591304 GFI1BQ5VTD9 330 aa16.54■□□□□ 0.24
CLPTM1-212ENST00000591304 CCDC28AQ8IWP9 274 aa16.54■□□□□ 0.24
CLPTM1-212ENST00000591304 EXOC3-AS1Q8N2X6 119 aa16.54■□□□□ 0.24
CLPTM1-212ENST00000591304 FXYD5Q96DB9 178 aa16.54■□□□□ 0.24
CLPTM1-212ENST00000591304 SLC25A5P05141 298 aaKnown RBP16.53■□□□□ 0.24
CLPTM1-212ENST00000591304 ZNF266Q14584 549 aa16.53■□□□□ 0.24
CLPTM1-212ENST00000591304 FCN2Q15485 313 aa16.53■□□□□ 0.24
CLPTM1-212ENST00000591304 KHDC3LQ587J8 217 aa16.53■□□□□ 0.24
CLPTM1-212ENST00000591304 LYPD1Q8N2G4 141 aa16.53■□□□□ 0.24
CLPTM1-212ENST00000591304 PLA2G2EQ9NZK7 142 aa16.53■□□□□ 0.24
CLPTM1-212ENST00000591304 TIMM8BQ9Y5J9 83 aaPredicted RBP16.53■□□□□ 0.24
CLPTM1-212ENST00000591304 PLAC8L1A1L4L8 177 aa16.52■□□□□ 0.24
CLPTM1-212ENST00000591304 HTN3P15516 51 aa16.52■□□□□ 0.24
CLPTM1-212ENST00000591304 ACOT6Q3I5F7 207 aaPredicted RBP16.52■□□□□ 0.24
CLPTM1-212ENST00000591304 C9orf47Q6ZRZ4 202 aa16.52■□□□□ 0.24
CLPTM1-212ENST00000591304 NMBP08949 121 aa16.51■□□□□ 0.23
CLPTM1-212ENST00000591304 OR10J4P0C629 311 aa16.51■□□□□ 0.23
CLPTM1-212ENST00000591304 KIR3DS1Q14943 382 aa16.51■□□□□ 0.23
CLPTM1-212ENST00000591304 TMEM78Q5T7P6 136 aa16.51■□□□□ 0.23
CLPTM1-212ENST00000591304 RNASE8Q8TDE3 154 aaKnown RBP16.51■□□□□ 0.23
CLPTM1-212ENST00000591304 AQP10Q96PS8 301 aa16.51■□□□□ 0.23
CLPTM1-212ENST00000591304 PYGO2Q9BRQ0 406 aa16.51■□□□□ 0.23
CLPTM1-212ENST00000591304 WFDC1Q9HC57 220 aa16.51■□□□□ 0.23
CLPTM1-212ENST00000591304 GIPP09681 153 aaPredicted RBP16.5■□□□□ 0.23
CLPTM1-212ENST00000591304 M6PRP20645 277 aa16.5■□□□□ 0.23
CLPTM1-212ENST00000591304 CSN1S1P47710 185 aa16.5■□□□□ 0.23
CLPTM1-212ENST00000591304 UBE2L3P68036 154 aaKnown RBP16.5■□□□□ 0.23
CLPTM1-212ENST00000591304 RGS21Q2M5E4 152 aa16.5■□□□□ 0.23
CLPTM1-212ENST00000591304 FAM122CQ6P4D5 195 aa16.5■□□□□ 0.23
CLPTM1-212ENST00000591304 AGPAT4-IT1Q9H0P7 198 aa16.5■□□□□ 0.23
CLPTM1-212ENST00000591304 TRAV12-3A0A0B4J271 114 aa16.49■□□□□ 0.23
CLPTM1-212ENST00000591304 A0A1W2PPV4 95 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms