RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 PRSS46E5RG02 174 aa13.62□□□□□ -0.23
SMARCA4-215ENST00000590574 GAGE1Q13065 139 aa13.61□□□□□ -0.23
SMARCA4-215ENST00000590574 C1orf229Q6ZS94 237 aaPredicted RBP13.61□□□□□ -0.23
SMARCA4-215ENST00000590574 CHTOPQ9Y3Y2 248 aaKnown RBP13.61□□□□□ -0.23
SMARCA4-215ENST00000590574 TMEM158Q8WZ71 300 aa13.61□□□□□ -0.23
SMARCA4-215ENST00000590574 C22orf46C9J442 243 aa13.61□□□□□ -0.23
SMARCA4-215ENST00000590574 CD5LO43866 347 aa13.61□□□□□ -0.23
SMARCA4-215ENST00000590574 PCNX2A6NKB5 2137 aa13.61□□□□□ -0.23
SMARCA4-215ENST00000590574 TRAV40A0A0B4J280 105 aa13.61□□□□□ -0.23
SMARCA4-215ENST00000590574 ORMDL2Q53FV1 153 aa13.61□□□□□ -0.23
SMARCA4-215ENST00000590574 SAMD5Q5TGI4 173 aa13.61□□□□□ -0.23
SMARCA4-215ENST00000590574 SMPXQ9UHP9 88 aa13.61□□□□□ -0.23
SMARCA4-215ENST00000590574 SRD5A1P18405 259 aa13.6□□□□□ -0.23
SMARCA4-215ENST00000590574 BCL6BQ8N143 479 aaPredicted RBP13.6□□□□□ -0.23
SMARCA4-215ENST00000590574 PRSS33Q8NF86 280 aa13.6□□□□□ -0.23
SMARCA4-215ENST00000590574 SHISA9B4DS77 424 aa13.6□□□□□ -0.23
SMARCA4-215ENST00000590574 WFDC12Q8WWY7 111 aa13.6□□□□□ -0.23
SMARCA4-215ENST00000590574 MOB4Q9Y3A3 225 aa13.6□□□□□ -0.23
SMARCA4-215ENST00000590574 APC2O95996 2303 aa13.6□□□□□ -0.23
SMARCA4-215ENST00000590574 CD7P09564 240 aa13.6□□□□□ -0.23
SMARCA4-215ENST00000590574 EFNA4P52798 201 aa13.6□□□□□ -0.23
SMARCA4-215ENST00000590574 OR5A1Q8NGJ0 315 aa13.59□□□□□ -0.23
SMARCA4-215ENST00000590574 ZNF503Q96F45 646 aa13.59□□□□□ -0.23
SMARCA4-215ENST00000590574 DUX5Q96PT3 197 aa13.59□□□□□ -0.23
SMARCA4-215ENST00000590574 ZNF256Q9Y2P7 627 aaPredicted RBP13.59□□□□□ -0.23
SMARCA4-215ENST00000590574 GP9P14770 177 aa13.59□□□□□ -0.23
SMARCA4-215ENST00000590574 RIPPLY3P57055 190 aa13.59□□□□□ -0.23
SMARCA4-215ENST00000590574 MRPL51Q4U2R6 128 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-215ENST00000590574 TRBV7-1A0A0A6YYK4 115 aa13.59□□□□□ -0.23
SMARCA4-215ENST00000590574 PRSS2P07478 247 aa13.59□□□□□ -0.23
SMARCA4-215ENST00000590574 KIR3DS1Q14943 382 aa13.59□□□□□ -0.23
SMARCA4-215ENST00000590574 MEGF9Q9H1U4 602 aa13.59□□□□□ -0.23
SMARCA4-215ENST00000590574 COL5A1P20908 1838 aaPredicted RBP13.59□□□□□ -0.23
SMARCA4-215ENST00000590574 SMAD7O15105 426 aaKnown RBP13.59□□□□□ -0.23
SMARCA4-215ENST00000590574 TNFRSF6BO95407 300 aa13.59□□□□□ -0.23
SMARCA4-215ENST00000590574 ZNF491Q8N8L2 437 aa13.59□□□□□ -0.23
SMARCA4-215ENST00000590574 OVOL1O14753 267 aa13.58□□□□□ -0.23
SMARCA4-215ENST00000590574 LY6DQ14210 128 aa13.58□□□□□ -0.23
SMARCA4-215ENST00000590574 ATG2AQ2TAZ0 1938 aa13.58□□□□□ -0.23
SMARCA4-215ENST00000590574 NPIPB6E9PJ23 425 aa13.58□□□□□ -0.24
SMARCA4-215ENST00000590574 APOMO95445 188 aa13.58□□□□□ -0.24
SMARCA4-215ENST00000590574 IGLV2-23P01705 113 aa13.58□□□□□ -0.24
SMARCA4-215ENST00000590574 ZNF418Q8TF45 676 aaPredicted RBP13.58□□□□□ -0.24
SMARCA4-215ENST00000590574 A0A1B0GWB2 263 aa13.58□□□□□ -0.24
SMARCA4-215ENST00000590574 IGFBPL1Q8WX77 278 aa13.58□□□□□ -0.24
SMARCA4-215ENST00000590574 PRR25Q96S07 402 aa13.58□□□□□ -0.24
SMARCA4-215ENST00000590574 MRPL36Q9P0J6 103 aaKnown RBP13.58□□□□□ -0.24
SMARCA4-215ENST00000590574 CACNA1HO95180 2353 aa13.58□□□□□ -0.24
SMARCA4-215ENST00000590574 PCNX1Q96RV3 2341 aa13.58□□□□□ -0.24
SMARCA4-215ENST00000590574 INTS1Q8N201 2190 aaKnown RBP13.58□□□□□ -0.24
SMARCA4-215ENST00000590574 SAA4P35542 130 aa13.58□□□□□ -0.24
SMARCA4-215ENST00000590574 NPFFR1Q9GZQ6 430 aa13.58□□□□□ -0.24
SMARCA4-215ENST00000590574 SIGLEC8Q9NYZ4 499 aa13.58□□□□□ -0.24
SMARCA4-215ENST00000590574 NPFFO15130 113 aa13.57□□□□□ -0.24
SMARCA4-215ENST00000590574 IL17RELQ6ZVW7 336 aa13.57□□□□□ -0.24
SMARCA4-215ENST00000590574 IGHV3OR16-12A0A075B7B8 117 aa13.57□□□□□ -0.24
SMARCA4-215ENST00000590574 ATP6V0E1O15342 81 aa13.57□□□□□ -0.24
SMARCA4-215ENST00000590574 LINC01559Q495D7 138 aa13.57□□□□□ -0.24
SMARCA4-215ENST00000590574 Q6ZVH6 145 aa13.57□□□□□ -0.24
SMARCA4-215ENST00000590574 ZNF318Q5VUA4 2279 aa13.57□□□□□ -0.24
SMARCA4-215ENST00000590574 BRD3OSQ6XYD6 125 aa13.57□□□□□ -0.24
SMARCA4-215ENST00000590574 JMJD8Q96S16 334 aa13.56□□□□□ -0.24
SMARCA4-215ENST00000590574 WDR87Q6ZQQ6 2873 aa13.56□□□□□ -0.24
SMARCA4-215ENST00000590574 SFTA2Q6UW10 78 aa13.56□□□□□ -0.24
SMARCA4-215ENST00000590574 NCKAP5O14513 1909 aa13.56□□□□□ -0.24
SMARCA4-215ENST00000590574 ESDP10768 282 aa13.56□□□□□ -0.24
SMARCA4-215ENST00000590574 DEFB104AQ8WTQ1 72 aa13.56□□□□□ -0.24
SMARCA4-215ENST00000590574 ZC2HC1BQ5TFG8 222 aa13.56□□□□□ -0.24
SMARCA4-215ENST00000590574 TECTAO75443 2155 aa13.56□□□□□ -0.24
SMARCA4-215ENST00000590574 CGB3P0DN86 165 aa13.55□□□□□ -0.24
SMARCA4-215ENST00000590574 CGB7P0DN87 165 aa13.55□□□□□ -0.24
SMARCA4-215ENST00000590574 CYSLTR1Q9Y271 337 aa13.55□□□□□ -0.24
SMARCA4-215ENST00000590574 GAGE12BA1L429 117 aa13.55□□□□□ -0.24
SMARCA4-215ENST00000590574 C9orf139Q6ZV77 190 aa13.55□□□□□ -0.24
SMARCA4-215ENST00000590574 FAM110DQ8TAY7 271 aaPredicted RBP13.55□□□□□ -0.24
SMARCA4-215ENST00000590574 K7ENP7 123 aa13.55□□□□□ -0.24
SMARCA4-215ENST00000590574 VGLL1Q99990 258 aa13.55□□□□□ -0.24
SMARCA4-215ENST00000590574 COX8AP10176 69 aa13.55□□□□□ -0.24
SMARCA4-215ENST00000590574 PRSS57Q6UWY2 283 aa13.55□□□□□ -0.24
SMARCA4-215ENST00000590574 LINC00173Q6ZV60 143 aa13.55□□□□□ -0.24
SMARCA4-215ENST00000590574 ZNF479Q96JC4 524 aa13.55□□□□□ -0.24
SMARCA4-215ENST00000590574 ZNF815PA8K554 130 aa13.54□□□□□ -0.24
SMARCA4-215ENST00000590574 BPESC1Q9GZL8 116 aa13.54□□□□□ -0.24
SMARCA4-215ENST00000590574 I3L2K1 104 aa13.54□□□□□ -0.24
SMARCA4-215ENST00000590574 FAM120AOSQ5T036 256 aa13.54□□□□□ -0.24
SMARCA4-215ENST00000590574 GTSF1Q8WW33 167 aa13.54□□□□□ -0.24
SMARCA4-215ENST00000590574 BEX4Q9NWD9 120 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-215ENST00000590574 G3V318 75 aa13.54□□□□□ -0.24
SMARCA4-215ENST00000590574 TGFAP01135 160 aa13.54□□□□□ -0.24
SMARCA4-215ENST00000590574 NPYP01303 97 aa13.54□□□□□ -0.24
SMARCA4-215ENST00000590574 C14orf178Q8N769 122 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-215ENST00000590574 SPTBN1Q01082 2364 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-215ENST00000590574 RAX2Q96IS3 184 aa13.53□□□□□ -0.24
SMARCA4-215ENST00000590574 PAPPA-AS1Q5QFB9 102 aa13.53□□□□□ -0.24
SMARCA4-215ENST00000590574 CD300EQ496F6 205 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-215ENST00000590574 HOXA3O43365 443 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-215ENST00000590574 BVES-AS1Q5T3Y7 98 aa13.53□□□□□ -0.24
SMARCA4-215ENST00000590574 INS-IGF2F8WCM5 200 aa13.52□□□□□ -0.24
SMARCA4-215ENST00000590574 COX6B1P14854 86 aa13.52□□□□□ -0.24
SMARCA4-215ENST00000590574 CHAC1Q9BUX1 264 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms