RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 TIMD4Q96H15 378 aa9.66□□□□□ -0.86
PDE4A-207ENST00000590407 MCRIP2Q9BUT9 160 aaKnown RBP9.66□□□□□ -0.86
PDE4A-207ENST00000590407 MINOS1-NBL1R4GNA1 71 aa9.66□□□□□ -0.86
PDE4A-207ENST00000590407 OR2T8A6NH00 312 aa9.65□□□□□ -0.86
PDE4A-207ENST00000590407 RAB9AP51151 201 aa9.65□□□□□ -0.86
PDE4A-207ENST00000590407 TPPP3Q9BW30 176 aa9.65□□□□□ -0.86
PDE4A-207ENST00000590407 RABAC1Q9UI14 185 aa9.65□□□□□ -0.86
PDE4A-207ENST00000590407 H0Y8G0 127 aa9.65□□□□□ -0.87
PDE4A-207ENST00000590407 FAM106CPP0CH98 169 aa9.65□□□□□ -0.87
PDE4A-207ENST00000590407 EGR2P11161 476 aaPredicted RBP9.65□□□□□ -0.87
PDE4A-207ENST00000590407 LOXL1Q08397 574 aaPredicted RBP9.65□□□□□ -0.87
PDE4A-207ENST00000590407 FAM106AQ4KMX7 169 aa9.65□□□□□ -0.87
PDE4A-207ENST00000590407 ANKRD39Q53RE8 183 aa9.65□□□□□ -0.87
PDE4A-207ENST00000590407 KLF17Q5JT82 389 aaPredicted RBP9.65□□□□□ -0.87
PDE4A-207ENST00000590407 BCL6BQ8N143 479 aaPredicted RBP9.65□□□□□ -0.87
PDE4A-207ENST00000590407 OR4X2Q8NGF9 303 aa9.65□□□□□ -0.87
PDE4A-207ENST00000590407 HILPDAQ9Y5L2 63 aa9.65□□□□□ -0.87
PDE4A-207ENST00000590407 IGKV2-40A0A087WW87 121 aaPredicted RBP9.64□□□□□ -0.87
PDE4A-207ENST00000590407 RBAKDNA6NC62 111 aa9.64□□□□□ -0.87
PDE4A-207ENST00000590407 H3BRM9 83 aa9.64□□□□□ -0.87
PDE4A-207ENST00000590407 SMAD7O15105 426 aaKnown RBP9.64□□□□□ -0.87
PDE4A-207ENST00000590407 IGKV2D-40P01614 121 aaPredicted RBP9.64□□□□□ -0.87
PDE4A-207ENST00000590407 IGHG4P01861 327 aa9.64□□□□□ -0.87
PDE4A-207ENST00000590407 CTSGP08311 255 aa9.64□□□□□ -0.87
PDE4A-207ENST00000590407 NDPQ00604 133 aa9.64□□□□□ -0.87
PDE4A-207ENST00000590407 HSD52Q0P140 79 aa9.64□□□□□ -0.87
PDE4A-207ENST00000590407 PRR30Q53SZ7 412 aaPredicted RBP9.64□□□□□ -0.87
PDE4A-207ENST00000590407 OR8A1Q8NGG7 326 aa9.64□□□□□ -0.87
PDE4A-207ENST00000590407 IFI27L1Q96BM0 104 aa9.64□□□□□ -0.87
PDE4A-207ENST00000590407 ASCL2Q99929 193 aa9.64□□□□□ -0.87
PDE4A-207ENST00000590407 COL25A1Q9BXS0 654 aaPredicted RBP9.64□□□□□ -0.87
PDE4A-207ENST00000590407 SMAD5-AS1Q9Y6J3 95 aa9.64□□□□□ -0.87
PDE4A-207ENST00000590407 A6NDN8 102 aa9.63□□□□□ -0.87
PDE4A-207ENST00000590407 CKS2P33552 79 aa9.63□□□□□ -0.87
PDE4A-207ENST00000590407 NHLH1Q02575 133 aa9.63□□□□□ -0.87
PDE4A-207ENST00000590407 TCF15Q12870 199 aa9.63□□□□□ -0.87
PDE4A-207ENST00000590407 AMMECR1LQ6DCA0 310 aa9.63□□□□□ -0.87
PDE4A-207ENST00000590407 ZNF575Q86XF7 245 aa9.63□□□□□ -0.87
PDE4A-207ENST00000590407 CEP250Q9BV73 2442 aa9.63□□□□□ -0.87
PDE4A-207ENST00000590407 LOC389332A0A1B0GUA5 103 aa9.63□□□□□ -0.87
PDE4A-207ENST00000590407 C7orf71A4D174 169 aa9.63□□□□□ -0.87
PDE4A-207ENST00000590407 NPYP01303 97 aa9.63□□□□□ -0.87
PDE4A-207ENST00000590407 CACNG7P62955 275 aa9.63□□□□□ -0.87
PDE4A-207ENST00000590407 HES1Q14469 280 aa9.63□□□□□ -0.87
PDE4A-207ENST00000590407 LINC01560Q8TB33 94 aa9.63□□□□□ -0.87
PDE4A-207ENST00000590407 RNF185Q96GF1 192 aa9.63□□□□□ -0.87
PDE4A-207ENST00000590407 MAP1LC3AQ9H492 121 aa9.63□□□□□ -0.87
PDE4A-207ENST00000590407 CST9LQ9H4G1 147 aa9.63□□□□□ -0.87
PDE4A-207ENST00000590407 NXT2Q9NPJ8 142 aaKnown RBP9.63□□□□□ -0.87
PDE4A-207ENST00000590407 PCNX1Q96RV3 2341 aa9.62□□□□□ -0.87
PDE4A-207ENST00000590407 ZFHX4Q86UP3 3567 aa9.62□□□□□ -0.87
PDE4A-207ENST00000590407 TRAV8-6A0A0B4J262 113 aa9.62□□□□□ -0.87
PDE4A-207ENST00000590407 CBY3A6NI87 242 aa9.62□□□□□ -0.87
PDE4A-207ENST00000590407 FABP5P3A8MUU1 101 aa9.62□□□□□ -0.87
PDE4A-207ENST00000590407 K7ENP7 123 aa9.62□□□□□ -0.87
PDE4A-207ENST00000590407 NDUFS7O75251 213 aa9.62□□□□□ -0.87
PDE4A-207ENST00000590407 ZNF80P51504 273 aaPredicted RBP9.62□□□□□ -0.87
PDE4A-207ENST00000590407 TWIST1Q15672 202 aa9.62□□□□□ -0.87
PDE4A-207ENST00000590407 C11orf71Q6IPW1 123 aa9.62□□□□□ -0.87
PDE4A-207ENST00000590407 ZMAT4Q9H898 229 aa9.62□□□□□ -0.87
PDE4A-207ENST00000590407 POLEQ07864 2286 aa9.62□□□□□ -0.87
PDE4A-207ENST00000590407 TMSB15BA0A087X1C1 80 aa9.61□□□□□ -0.87
PDE4A-207ENST00000590407 A1L4Q6 167 aa9.61□□□□□ -0.87
PDE4A-207ENST00000590407 C9orf118A6NHY6 69 aa9.61□□□□□ -0.87
PDE4A-207ENST00000590407 KLRD1Q13241 179 aa9.61□□□□□ -0.87
PDE4A-207ENST00000590407 OCIAD2Q56VL3 154 aa9.61□□□□□ -0.87
PDE4A-207ENST00000590407 UFSP1Q6NVU6 142 aa9.61□□□□□ -0.87
PDE4A-207ENST00000590407 VMO1Q7Z5L0 202 aa9.61□□□□□ -0.87
PDE4A-207ENST00000590407 FAM110DQ8TAY7 271 aaPredicted RBP9.61□□□□□ -0.87
PDE4A-207ENST00000590407 MRPL53Q96EL3 112 aaKnown RBP9.61□□□□□ -0.87
PDE4A-207ENST00000590407 VGLL1Q99990 258 aa9.61□□□□□ -0.87
PDE4A-207ENST00000590407 TIMM8BQ9Y5J9 83 aaPredicted RBP9.61□□□□□ -0.87
PDE4A-207ENST00000590407 S4R3C0 116 aa9.61□□□□□ -0.87
PDE4A-207ENST00000590407 IGHV7-81A0A0B4J1V7 117 aa9.6□□□□□ -0.87
PDE4A-207ENST00000590407 FCER1GP30273 86 aa9.6□□□□□ -0.87
PDE4A-207ENST00000590407 ADAMTSL5Q6ZMM2 481 aa9.6□□□□□ -0.87
PDE4A-207ENST00000590407 SLC50A1Q9BRV3 221 aa9.6□□□□□ -0.87
PDE4A-207ENST00000590407 APC2O95996 2303 aa9.6□□□□□ -0.87
PDE4A-207ENST00000590407 PRSS47A8MTI9 375 aa9.6□□□□□ -0.87
PDE4A-207ENST00000590407 HLA-DRB4P13762 266 aa9.6□□□□□ -0.87
PDE4A-207ENST00000590407 NBL1P41271 181 aa9.6□□□□□ -0.87
PDE4A-207ENST00000590407 FOXE3Q13461 319 aa9.6□□□□□ -0.87
PDE4A-207ENST00000590407 GTF2H5Q6ZYL4 71 aa9.6□□□□□ -0.87
PDE4A-207ENST00000590407 ZNF502Q8TBZ5 544 aa9.6□□□□□ -0.87
PDE4A-207ENST00000590407 HIGD1BQ9P298 99 aa9.6□□□□□ -0.87
PDE4A-207ENST00000590407 HLA-DRB4X5D2U9 266 aa9.6□□□□□ -0.87
PDE4A-207ENST00000590407 CFAP47Q6ZTR5 3102 aa9.6□□□□□ -0.87
PDE4A-207ENST00000590407 ACACAQ13085 2346 aa9.59□□□□□ -0.87
PDE4A-207ENST00000590407 MAP1BP46821 2468 aaKnown RBP9.59□□□□□ -0.87
PDE4A-207ENST00000590407 DYNAPQ8N1N2 210 aa9.59□□□□□ -0.87
PDE4A-207ENST00000590407 Q8TAT8 98 aa9.59□□□□□ -0.87
PDE4A-207ENST00000590407 ZFAND3Q9H8U3 227 aa9.59□□□□□ -0.87
PDE4A-207ENST00000590407 HIF1ANQ9NWT6 349 aa9.59□□□□□ -0.87
PDE4A-207ENST00000590407 SMPXQ9UHP9 88 aa9.59□□□□□ -0.87
PDE4A-207ENST00000590407 TTC28Q96AY4 2481 aa9.58□□□□□ -0.88
PDE4A-207ENST00000590407 NCBP2LA6PVI3 153 aaKnown RBP9.58□□□□□ -0.88
PDE4A-207ENST00000590407 BUB3O43684 328 aa9.58□□□□□ -0.88
PDE4A-207ENST00000590407 TMEM11P17152 192 aa9.58□□□□□ -0.88
PDE4A-207ENST00000590407 Q8N9W7 124 aa9.58□□□□□ -0.88
PDE4A-207ENST00000590407 GAGE12BA1L429 117 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms