RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 PLA2G2EQ9NZK7 142 aa13.03□□□□□ -0.32
DDX39A-212ENST00000590260 GOLT1BQ9Y3E0 138 aa13.03□□□□□ -0.32
DDX39A-212ENST00000590260 JTBO76095 146 aa13.02□□□□□ -0.33
DDX39A-212ENST00000590260 GIPP09681 153 aaPredicted RBP13.02□□□□□ -0.33
DDX39A-212ENST00000590260 RGS21Q2M5E4 152 aa13.02□□□□□ -0.33
DDX39A-212ENST00000590260 FUT9Q9Y231 359 aa13.02□□□□□ -0.33
DDX39A-212ENST00000590260 PLAC8L1A1L4L8 177 aa13.01□□□□□ -0.33
DDX39A-212ENST00000590260 AMBPP02760 352 aa13.01□□□□□ -0.33
DDX39A-212ENST00000590260 CT45A10P0DMU9 189 aa13.01□□□□□ -0.33
DDX39A-212ENST00000590260 RHOBP62745 196 aa13.01□□□□□ -0.33
DDX39A-212ENST00000590260 FFAR4Q5NUL3 377 aa13.01□□□□□ -0.33
DDX39A-212ENST00000590260 EXOC3-AS1Q8N2X6 119 aa13.01□□□□□ -0.33
DDX39A-212ENST00000590260 BLNKQ8WV28 456 aa13.01□□□□□ -0.33
DDX39A-212ENST00000590260 AQP10Q96PS8 301 aa13.01□□□□□ -0.33
DDX39A-212ENST00000590260 MRPL32Q9BYC8 188 aaKnown RBP13.01□□□□□ -0.33
DDX39A-212ENST00000590260 KLK5Q9Y337 293 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-212ENST00000590260 KMT2AQ03164 3969 aa13□□□□□ -0.33
DDX39A-212ENST00000590260 LOC102723971A0A1B0GUV8 181 aa13□□□□□ -0.33
DDX39A-212ENST00000590260 ZNF705GA8MUZ8 300 aaPredicted RBP13□□□□□ -0.33
DDX39A-212ENST00000590260 NPIPB6E9PJ23 425 aa13□□□□□ -0.33
DDX39A-212ENST00000590260 C17orf112F2Z3M2 114 aa13□□□□□ -0.33
DDX39A-212ENST00000590260 INSP01308 110 aa13□□□□□ -0.33
DDX39A-212ENST00000590260 OR10J4P0C629 311 aa13□□□□□ -0.33
DDX39A-212ENST00000590260 AZU1P20160 251 aa13□□□□□ -0.33
DDX39A-212ENST00000590260 EMP1P54849 157 aa13□□□□□ -0.33
DDX39A-212ENST00000590260 RPP25LQ8N5L8 163 aaKnown RBP13□□□□□ -0.33
DDX39A-212ENST00000590260 OR51M1Q9H341 326 aa13□□□□□ -0.33
DDX39A-212ENST00000590260 KCNIP2Q9NS61 270 aa13□□□□□ -0.33
DDX39A-212ENST00000590260 DKK2Q9UBU2 259 aa13□□□□□ -0.33
DDX39A-212ENST00000590260 APLNQ9ULZ1 77 aa13□□□□□ -0.33
DDX39A-212ENST00000590260 RNF222A6NCQ9 220 aa12.99□□□□□ -0.33
DDX39A-212ENST00000590260 IFNA5P01569 189 aa12.99□□□□□ -0.33
DDX39A-212ENST00000590260 HBE1P02100 147 aa12.99□□□□□ -0.33
DDX39A-212ENST00000590260 ERCC8Q13216 396 aa12.99□□□□□ -0.33
DDX39A-212ENST00000590260 PDE6HQ13956 83 aa12.99□□□□□ -0.33
DDX39A-212ENST00000590260 MRPL53Q96EL3 112 aaKnown RBP12.99□□□□□ -0.33
DDX39A-212ENST00000590260 PHYHIPLQ96FC7 376 aa12.99□□□□□ -0.33
DDX39A-212ENST00000590260 YTHDF2Q9Y5A9 579 aaKnown RBP12.99□□□□□ -0.33
DDX39A-212ENST00000590260 NBEAP1P0C6P0 100 aa12.98□□□□□ -0.33
DDX39A-212ENST00000590260 CDKN1BP46527 198 aa12.98□□□□□ -0.33
DDX39A-212ENST00000590260 RRN3P1Q2M238 152 aa12.98□□□□□ -0.33
DDX39A-212ENST00000590260 FAM222AQ5U5X8 452 aa12.98□□□□□ -0.33
DDX39A-212ENST00000590260 SCGB1C1Q8TD33 95 aa12.98□□□□□ -0.33
DDX39A-212ENST00000590260 C2CD4CQ8TF44 421 aa12.98□□□□□ -0.33
DDX39A-212ENST00000590260 PAXXQ9BUH6 204 aa12.98□□□□□ -0.33
DDX39A-212ENST00000590260 TRAV10A0A0B4J240 114 aa12.97□□□□□ -0.33
DDX39A-212ENST00000590260 TMEM189A5PLL7 270 aa12.97□□□□□ -0.33
DDX39A-212ENST00000590260 C11orf94C9JXX5 98 aa12.97□□□□□ -0.33
DDX39A-212ENST00000590260 RAB2AP61019 212 aa12.97□□□□□ -0.33
DDX39A-212ENST00000590260 ICAM4Q14773 271 aa12.97□□□□□ -0.33
DDX39A-212ENST00000590260 GFI1BQ5VTD9 330 aa12.97□□□□□ -0.33
DDX39A-212ENST00000590260 OR10J6PQ8NGY7 276 aa12.97□□□□□ -0.33
DDX39A-212ENST00000590260 RNF141Q8WVD5 230 aa12.97□□□□□ -0.33
DDX39A-212ENST00000590260 FAM19A4Q96LR4 140 aa12.97□□□□□ -0.33
DDX39A-212ENST00000590260 TIMM9Q9Y5J7 89 aa12.97□□□□□ -0.33
DDX39A-212ENST00000590260 LY6G6CO95867 125 aa12.96□□□□□ -0.33
DDX39A-212ENST00000590260 SPART-AS1P0CW21 52 aa12.96□□□□□ -0.33
DDX39A-212ENST00000590260 ASB13Q8WXK3 278 aa12.96□□□□□ -0.33
DDX39A-212ENST00000590260 TMEM208Q9BTX3 173 aa12.96□□□□□ -0.33
DDX39A-212ENST00000590260 AGPAT4-IT1Q9H0P7 198 aa12.96□□□□□ -0.33
DDX39A-212ENST00000590260 TNFSF18Q9UNG2 199 aa12.96□□□□□ -0.33
DDX39A-212ENST00000590260 EPPK1P58107 5090 aaKnown RBP12.96□□□□□ -0.33
DDX39A-212ENST00000590260 DNAH6Q9C0G6 4158 aa12.96□□□□□ -0.34
DDX39A-212ENST00000590260 IGKV2-40A0A087WW87 121 aaPredicted RBP12.95□□□□□ -0.34
DDX39A-212ENST00000590260 IGLL5B9A064 214 aa12.95□□□□□ -0.34
DDX39A-212ENST00000590260 IGKV2D-40P01614 121 aaPredicted RBP12.95□□□□□ -0.34
DDX39A-212ENST00000590260 ODF3Q96PU9 254 aa12.95□□□□□ -0.34
DDX39A-212ENST00000590260 PRELID1Q9Y255 219 aa12.95□□□□□ -0.34
DDX39A-212ENST00000590260 DEFB131BA0A096LNP1 70 aa12.94□□□□□ -0.34
DDX39A-212ENST00000590260 OR7C2O60412 319 aa12.94□□□□□ -0.34
DDX39A-212ENST00000590260 ATP6V0CP27449 155 aa12.94□□□□□ -0.34
DDX39A-212ENST00000590260 TSPOP30536 169 aa12.94□□□□□ -0.34
DDX39A-212ENST00000590260 FAM122CQ6P4D5 195 aa12.94□□□□□ -0.34
DDX39A-212ENST00000590260 HSD17B11Q8NBQ5 300 aa12.94□□□□□ -0.34
DDX39A-212ENST00000590260 OR2T35Q8NGX2 323 aa12.94□□□□□ -0.34
DDX39A-212ENST00000590260 LINC01587Q99440 93 aa12.94□□□□□ -0.34
DDX39A-212ENST00000590260 VGLL1Q99990 258 aa12.94□□□□□ -0.34
DDX39A-212ENST00000590260 PPP1R14DQ9NXH3 145 aa12.94□□□□□ -0.34
DDX39A-212ENST00000590260 IGHV4-4A0A075B6R2 117 aa12.93□□□□□ -0.34
DDX39A-212ENST00000590260 J3KRW8 73 aa12.93□□□□□ -0.34
DDX39A-212ENST00000590260 M6PRP20645 277 aa12.93□□□□□ -0.34
DDX39A-212ENST00000590260 C9orf47Q6ZRZ4 202 aa12.93□□□□□ -0.34
DDX39A-212ENST00000590260 OR2G3Q8NGZ4 309 aa12.93□□□□□ -0.34
DDX39A-212ENST00000590260 NIPSNAP3BQ9BS92 247 aa12.93□□□□□ -0.34
DDX39A-212ENST00000590260 SH3BGRL3Q9H299 93 aa12.93□□□□□ -0.34
DDX39A-212ENST00000590260 FXYD6-FXYD2A0A087WZ82 144 aa12.92□□□□□ -0.34
DDX39A-212ENST00000590260 SMLR1H3BR10 107 aa12.92□□□□□ -0.34
DDX39A-212ENST00000590260 HMGB3O15347 200 aaKnown RBP12.92□□□□□ -0.34
DDX39A-212ENST00000590260 TAS2R60P59551 318 aa12.92□□□□□ -0.34
DDX39A-212ENST00000590260 UBE2L3P68036 154 aaKnown RBP12.92□□□□□ -0.34
DDX39A-212ENST00000590260 PRR9Q5T870 116 aa12.92□□□□□ -0.34
DDX39A-212ENST00000590260 RPL7L1Q6DKI1 246 aaKnown RBP12.92□□□□□ -0.34
DDX39A-212ENST00000590260 LGALS9CQ6DKI2 356 aa12.92□□□□□ -0.34
DDX39A-212ENST00000590260 Q6ZQT7 251 aa12.92□□□□□ -0.34
DDX39A-212ENST00000590260 TMEM256Q8N2U0 113 aa12.92□□□□□ -0.34
DDX39A-212ENST00000590260 RNASE8Q8TDE3 154 aaKnown RBP12.92□□□□□ -0.34
DDX39A-212ENST00000590260 TRAV12-3A0A0B4J271 114 aa12.91□□□□□ -0.34
DDX39A-212ENST00000590260 KLLNB2CW77 178 aa12.91□□□□□ -0.34
DDX39A-212ENST00000590260 RANP62826 216 aaKnown RBP12.91□□□□□ -0.34
DDX39A-212ENST00000590260 CD300CQ08708 224 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms