RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 KIR3DS1Q14943 382 aa12.55□□□□□ -0.4
PRKCSH-211ENST00000590098 GUK1Q16774 197 aa12.55□□□□□ -0.4
PRKCSH-211ENST00000590098 GFI1BQ5VTD9 330 aa12.55□□□□□ -0.4
PRKCSH-211ENST00000590098 ZNF575Q86XF7 245 aa12.55□□□□□ -0.4
PRKCSH-211ENST00000590098 C6orf223Q8N319 242 aa12.55□□□□□ -0.4
PRKCSH-211ENST00000590098 OR1L4Q8NGR5 311 aa12.55□□□□□ -0.4
PRKCSH-211ENST00000590098 PARD6GQ9BYG4 376 aaPredicted RBP12.55□□□□□ -0.4
PRKCSH-211ENST00000590098 LINC00588Q9Y4M8 146 aa12.55□□□□□ -0.4
PRKCSH-211ENST00000590098 TRAV6A0A075B6T7 132 aa12.54□□□□□ -0.4
PRKCSH-211ENST00000590098 H3BQ15 152 aa12.54□□□□□ -0.4
PRKCSH-211ENST00000590098 PLA2G10O15496 165 aa12.54□□□□□ -0.4
PRKCSH-211ENST00000590098 LYRM1O43325 122 aa12.54□□□□□ -0.4
PRKCSH-211ENST00000590098 PVALBP20472 110 aaPredicted RBP12.54□□□□□ -0.4
PRKCSH-211ENST00000590098 OR5I1Q13606 314 aa12.54□□□□□ -0.4
PRKCSH-211ENST00000590098 SAT2Q96F10 170 aaPredicted RBP12.54□□□□□ -0.4
PRKCSH-211ENST00000590098 PFDN5Q99471 154 aa12.54□□□□□ -0.4
PRKCSH-211ENST00000590098 UQCC1Q9NVA1 299 aa12.54□□□□□ -0.4
PRKCSH-211ENST00000590098 SNURFLB1AK76 121 aa12.53□□□□□ -0.4
PRKCSH-211ENST00000590098 J3KRW8 73 aa12.53□□□□□ -0.4
PRKCSH-211ENST00000590098 TCRBP04435 133 aa12.53□□□□□ -0.4
PRKCSH-211ENST00000590098 LEPP41159 167 aa12.53□□□□□ -0.4
PRKCSH-211ENST00000590098 TNP2Q05952 138 aa12.53□□□□□ -0.4
PRKCSH-211ENST00000590098 MIC13Q5XKP0 118 aa12.53□□□□□ -0.4
PRKCSH-211ENST00000590098 SSX7Q7RTT5 188 aa12.53□□□□□ -0.4
PRKCSH-211ENST00000590098 ZNF431Q8TF32 576 aaPredicted RBP12.53□□□□□ -0.4
PRKCSH-211ENST00000590098 GNPNAT1Q96EK6 184 aaPredicted RBP12.53□□□□□ -0.4
PRKCSH-211ENST00000590098 WDR83OSQ9Y284 106 aa12.53□□□□□ -0.4
PRKCSH-211ENST00000590098 ABCA13Q86UQ4 5058 aa12.52□□□□□ -0.4
PRKCSH-211ENST00000590098 TRAV5A0A0B4J249 113 aa12.52□□□□□ -0.41
PRKCSH-211ENST00000590098 FAM24AA6NFZ4 105 aa12.52□□□□□ -0.41
PRKCSH-211ENST00000590098 RLN2P04090 185 aa12.52□□□□□ -0.41
PRKCSH-211ENST00000590098 CT45A10P0DMU9 189 aa12.52□□□□□ -0.41
PRKCSH-211ENST00000590098 M6PRP20645 277 aa12.52□□□□□ -0.41
PRKCSH-211ENST00000590098 C12orf45Q8N5I9 185 aaPredicted RBP12.52□□□□□ -0.41
PRKCSH-211ENST00000590098 C2orf50Q96LR7 162 aa12.52□□□□□ -0.41
PRKCSH-211ENST00000590098 ODF3Q96PU9 254 aa12.52□□□□□ -0.41
PRKCSH-211ENST00000590098 SEC22CQ9BRL7 303 aa12.52□□□□□ -0.41
PRKCSH-211ENST00000590098 KRTAP4-5Q9BYR2 181 aa12.52□□□□□ -0.41
PRKCSH-211ENST00000590098 TRAV26-1A0A087WT03 109 aa12.51□□□□□ -0.41
PRKCSH-211ENST00000590098 TRAV12-3A0A0B4J271 114 aa12.51□□□□□ -0.41
PRKCSH-211ENST00000590098 GAGE12BA1L429 117 aa12.51□□□□□ -0.41
PRKCSH-211ENST00000590098 GAGE7O76087 117 aa12.51□□□□□ -0.41
PRKCSH-211ENST00000590098 GAGE12FP0CL80 117 aa12.51□□□□□ -0.41
PRKCSH-211ENST00000590098 GAGE12GP0CL81 117 aa12.51□□□□□ -0.41
PRKCSH-211ENST00000590098 GAGE12IP0CL82 117 aa12.51□□□□□ -0.41
PRKCSH-211ENST00000590098 S100A11P31949 105 aa12.51□□□□□ -0.41
PRKCSH-211ENST00000590098 S100A10P60903 97 aa12.51□□□□□ -0.41
PRKCSH-211ENST00000590098 NUDT15Q9NV35 164 aa12.51□□□□□ -0.41
PRKCSH-211ENST00000590098 UBE2L5PA0A1B0GUS4 154 aa12.5□□□□□ -0.41
PRKCSH-211ENST00000590098 NPIPB6E9PJ23 425 aa12.5□□□□□ -0.41
PRKCSH-211ENST00000590098 RPL29P47914 159 aaKnown RBP12.5□□□□□ -0.41
PRKCSH-211ENST00000590098 SULT1A1P50225 295 aa12.5□□□□□ -0.41
PRKCSH-211ENST00000590098 HBG1P69891 147 aa12.5□□□□□ -0.41
PRKCSH-211ENST00000590098 HBG2P69892 147 aa12.5□□□□□ -0.41
PRKCSH-211ENST00000590098 BAXQ07812 192 aa12.5□□□□□ -0.41
PRKCSH-211ENST00000590098 STX12Q86Y82 276 aa12.5□□□□□ -0.41
PRKCSH-211ENST00000590098 LINC00612Q8N6U2 182 aa12.5□□□□□ -0.41
PRKCSH-211ENST00000590098 RXFP4Q8TDU9 374 aa12.5□□□□□ -0.41
PRKCSH-211ENST00000590098 ZNF503Q96F45 646 aa12.5□□□□□ -0.41
PRKCSH-211ENST00000590098 PYGO2Q9BRQ0 406 aa12.5□□□□□ -0.41
PRKCSH-211ENST00000590098 C11orf1Q9H5F2 150 aa12.5□□□□□ -0.41
PRKCSH-211ENST00000590098 Q9H8V8 135 aa12.5□□□□□ -0.41
PRKCSH-211ENST00000590098 LYRM2Q9NU23 88 aaPredicted RBP12.5□□□□□ -0.41
PRKCSH-211ENST00000590098 SLC39A9Q9NUM3 307 aa12.5□□□□□ -0.41
PRKCSH-211ENST00000590098 ZNF586Q9NXT0 402 aa12.5□□□□□ -0.41
PRKCSH-211ENST00000590098 A0A0J9YY99 117 aa12.49□□□□□ -0.41
PRKCSH-211ENST00000590098 C16orf90A8MZG2 172 aa12.49□□□□□ -0.41
PRKCSH-211ENST00000590098 ZNF253O75346 499 aa12.49□□□□□ -0.41
PRKCSH-211ENST00000590098 VWC2Q2TAL6 325 aa12.49□□□□□ -0.41
PRKCSH-211ENST00000590098 HSPG2P98160 4391 aa12.48□□□□□ -0.41
PRKCSH-211ENST00000590098 TRBV19A0A075B6N1 114 aa12.48□□□□□ -0.41
PRKCSH-211ENST00000590098 H2AFB2P0C5Z0 115 aa12.48□□□□□ -0.41
PRKCSH-211ENST00000590098 TMEM252Q8N6L7 170 aa12.48□□□□□ -0.41
PRKCSH-211ENST00000590098 MRPL53Q96EL3 112 aaKnown RBP12.48□□□□□ -0.41
PRKCSH-211ENST00000590098 TIMM9Q9Y5J7 89 aa12.48□□□□□ -0.41
PRKCSH-211ENST00000590098 IGSF23A1L1A6 192 aa12.47□□□□□ -0.41
PRKCSH-211ENST00000590098 SLC25A5P05141 298 aaKnown RBP12.47□□□□□ -0.41
PRKCSH-211ENST00000590098 HOXA5P20719 270 aa12.47□□□□□ -0.41
PRKCSH-211ENST00000590098 FGF7P21781 194 aa12.47□□□□□ -0.41
PRKCSH-211ENST00000590098 DAZ2Q13117 558 aaKnown RBP12.47□□□□□ -0.41
PRKCSH-211ENST00000590098 ATP6V1FQ16864 119 aa12.47□□□□□ -0.41
PRKCSH-211ENST00000590098 TTC32Q5I0X7 151 aa12.47□□□□□ -0.41
PRKCSH-211ENST00000590098 CHAC2Q8WUX2 184 aa12.47□□□□□ -0.41
PRKCSH-211ENST00000590098 TMEM14CQ9P0S9 112 aa12.47□□□□□ -0.41
PRKCSH-211ENST00000590098 PRELID1Q9Y255 219 aa12.47□□□□□ -0.41
PRKCSH-211ENST00000590098 LRP1BQ9NZR2 4599 aa12.47□□□□□ -0.41
PRKCSH-211ENST00000590098 C7orf71A4D174 169 aa12.46□□□□□ -0.41
PRKCSH-211ENST00000590098 H3BNG1 76 aa12.46□□□□□ -0.41
PRKCSH-211ENST00000590098 M0R3E3 92 aa12.46□□□□□ -0.41
PRKCSH-211ENST00000590098 HIST1H1EP10412 219 aaKnown RBP12.46□□□□□ -0.41
PRKCSH-211ENST00000590098 ERCC8Q13216 396 aa12.46□□□□□ -0.41
PRKCSH-211ENST00000590098 RAB32Q13637 225 aa12.46□□□□□ -0.41
PRKCSH-211ENST00000590098 ZNF680Q8NEM1 530 aa12.46□□□□□ -0.41
PRKCSH-211ENST00000590098 LINC00477Q96M19 166 aa12.46□□□□□ -0.41
PRKCSH-211ENST00000590098 GPN1Q9HCN4 374 aaPredicted RBP12.46□□□□□ -0.41
PRKCSH-211ENST00000590098 NDUFA13Q9P0J0 144 aa12.46□□□□□ -0.41
PRKCSH-211ENST00000590098 TRGV2A0A075B6R0 118 aa12.45□□□□□ -0.42
PRKCSH-211ENST00000590098 FAM240BA0A1B0GVZ2 78 aa12.45□□□□□ -0.42
PRKCSH-211ENST00000590098 MPDU1O75352 247 aa12.45□□□□□ -0.42
PRKCSH-211ENST00000590098 PDE6HQ13956 83 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms