RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 PGPA6NDG6 321 aa10.09□□□□□ -0.79
VMP1-210ENST00000589823 KNCNA6PVL3 124 aa10.09□□□□□ -0.79
VMP1-210ENST00000589823 PPT1P50897 306 aa10.09□□□□□ -0.79
VMP1-210ENST00000589823 ZNF680Q8NEM1 530 aa10.09□□□□□ -0.79
VMP1-210ENST00000589823 CMTM2Q8TAZ6 248 aa10.09□□□□□ -0.79
VMP1-210ENST00000589823 CITED4Q96RK1 184 aa10.09□□□□□ -0.79
VMP1-210ENST00000589823 SAV1Q9H4B6 383 aaPredicted RBP10.09□□□□□ -0.79
VMP1-210ENST00000589823 A0A0J9YX75 114 aa10.08□□□□□ -0.8
VMP1-210ENST00000589823 A0A1W2PRE2 83 aa10.08□□□□□ -0.8
VMP1-210ENST00000589823 ZNF705FA8MVS1 300 aaPredicted RBP10.08□□□□□ -0.8
VMP1-210ENST00000589823 A8MZ25 164 aa10.08□□□□□ -0.8
VMP1-210ENST00000589823 F6UB75 175 aa10.08□□□□□ -0.8
VMP1-210ENST00000589823 M0R3E3 92 aa10.08□□□□□ -0.8
VMP1-210ENST00000589823 HLA-DRB4P13762 266 aa10.08□□□□□ -0.8
VMP1-210ENST00000589823 UBE2G2P60604 165 aa10.08□□□□□ -0.8
VMP1-210ENST00000589823 OR10J6PQ8NGY7 276 aa10.08□□□□□ -0.8
VMP1-210ENST00000589823 RXFP4Q8TDU9 374 aa10.08□□□□□ -0.8
VMP1-210ENST00000589823 HLA-DRB4X5D2U9 266 aa10.08□□□□□ -0.8
VMP1-210ENST00000589823 LOC102724200A0A096LPH7 203 aaPredicted RBP10.07□□□□□ -0.8
VMP1-210ENST00000589823 DUSP14O95147 198 aaKnown RBP10.07□□□□□ -0.8
VMP1-210ENST00000589823 DEFB1P60022 68 aa10.07□□□□□ -0.8
VMP1-210ENST00000589823 OR8A1Q8NGG7 326 aa10.07□□□□□ -0.8
VMP1-210ENST00000589823 NKX6-2Q9C056 277 aaPredicted RBP10.07□□□□□ -0.8
VMP1-210ENST00000589823 ARL2-SNX15V9GYD0 113 aa10.07□□□□□ -0.8
VMP1-210ENST00000589823 FAM74A7A6NL05 159 aa10.06□□□□□ -0.8
VMP1-210ENST00000589823 PRAC2D3DTV9 90 aa10.06□□□□□ -0.8
VMP1-210ENST00000589823 H3BMM0 161 aa10.06□□□□□ -0.8
VMP1-210ENST00000589823 IFNA1P01562 189 aa10.06□□□□□ -0.8
VMP1-210ENST00000589823 SLC25A5P05141 298 aaKnown RBP10.06□□□□□ -0.8
VMP1-210ENST00000589823 FRMD6-AS1P0C7T7 363 aa10.06□□□□□ -0.8
VMP1-210ENST00000589823 RPL35AP18077 110 aaKnown RBP10.06□□□□□ -0.8
VMP1-210ENST00000589823 SUMO1P63165 101 aaKnown RBP10.06□□□□□ -0.8
VMP1-210ENST00000589823 HIST1H1AQ02539 215 aaPredicted RBP10.06□□□□□ -0.8
VMP1-210ENST00000589823 GDF5OSQ5U4N7 250 aa10.06□□□□□ -0.8
VMP1-210ENST00000589823 CST9LP1Q5W188 147 aa10.06□□□□□ -0.8
VMP1-210ENST00000589823 OR4B1Q8NGF8 309 aa10.06□□□□□ -0.8
VMP1-210ENST00000589823 MANBALQ9NQG1 85 aa10.06□□□□□ -0.8
VMP1-210ENST00000589823 GNG13Q9P2W3 67 aa10.06□□□□□ -0.8
VMP1-210ENST00000589823 RPH3ALQ9UNE2 315 aa10.06□□□□□ -0.8
VMP1-210ENST00000589823 YTHDF2Q9Y5A9 579 aaKnown RBP10.06□□□□□ -0.8
VMP1-210ENST00000589823 RBMY1BA6NDE4 496 aaKnown RBP10.05□□□□□ -0.8
VMP1-210ENST00000589823 RBMY1EA6NEQ0 496 aaKnown RBP10.05□□□□□ -0.8
VMP1-210ENST00000589823 GGTLC3B5MD39 225 aa10.05□□□□□ -0.8
VMP1-210ENST00000589823 PAGE4O60829 102 aa10.05□□□□□ -0.8
VMP1-210ENST00000589823 IGKV3-20P01619 116 aa10.05□□□□□ -0.8
VMP1-210ENST00000589823 RBMY1DP0C7P1 496 aaKnown RBP10.05□□□□□ -0.8
VMP1-210ENST00000589823 ZNF705DP0CH99 300 aaPredicted RBP10.05□□□□□ -0.8
VMP1-210ENST00000589823 ZNF705BP0CI00 300 aaPredicted RBP10.05□□□□□ -0.8
VMP1-210ENST00000589823 PRB4P10163 310 aaPredicted RBP10.05□□□□□ -0.8
VMP1-210ENST00000589823 CNN1P51911 297 aaKnown RBP10.05□□□□□ -0.8
VMP1-210ENST00000589823 NUTF2P61970 127 aaKnown RBP10.05□□□□□ -0.8
VMP1-210ENST00000589823 CCL20P78556 96 aa10.05□□□□□ -0.8
VMP1-210ENST00000589823 TRPT1Q86TN4 253 aaKnown RBP10.05□□□□□ -0.8
VMP1-210ENST00000589823 ARL6IP6Q8N6S5 226 aa10.05□□□□□ -0.8
VMP1-210ENST00000589823 C5orf17Q8NAS9 161 aa10.05□□□□□ -0.8
VMP1-210ENST00000589823 PPP1R14DQ9NXH3 145 aa10.05□□□□□ -0.8
VMP1-210ENST00000589823 IGKV2-40A0A087WW87 121 aaPredicted RBP10.04□□□□□ -0.8
VMP1-210ENST00000589823 IGKV2D-40P01614 121 aaPredicted RBP10.04□□□□□ -0.8
VMP1-210ENST00000589823 APOC4P55056 127 aa10.04□□□□□ -0.8
VMP1-210ENST00000589823 MORN3Q6PF18 240 aaPredicted RBP10.04□□□□□ -0.8
VMP1-210ENST00000589823 CLUHP3Q96NS8 147 aa10.04□□□□□ -0.8
VMP1-210ENST00000589823 EPDR1Q9UM22 224 aa10.04□□□□□ -0.8
VMP1-210ENST00000589823 KIR2DL5BA0A0G2JN68 375 aa10.03□□□□□ -0.8
VMP1-210ENST00000589823 KIR2DL5BA0A0G2JPC4 375 aa10.03□□□□□ -0.8
VMP1-210ENST00000589823 SERTM2A0A1B0GWG4 89 aa10.03□□□□□ -0.8
VMP1-210ENST00000589823 RBAKDNA6NC62 111 aa10.03□□□□□ -0.8
VMP1-210ENST00000589823 DIRC3C9JPN6 131 aa10.03□□□□□ -0.8
VMP1-210ENST00000589823 NPIPB6E9PJ23 425 aa10.03□□□□□ -0.8
VMP1-210ENST00000589823 K7EQM0 130 aa10.03□□□□□ -0.8
VMP1-210ENST00000589823 RAB14P61106 215 aa10.03□□□□□ -0.8
VMP1-210ENST00000589823 GNG5P63218 68 aa10.03□□□□□ -0.8
VMP1-210ENST00000589823 TMEM78Q5T7P6 136 aa10.03□□□□□ -0.8
VMP1-210ENST00000589823 LINC00322Q6ZN03 302 aaPredicted RBP10.03□□□□□ -0.8
VMP1-210ENST00000589823 ZNF767PQ75MW2 155 aa10.03□□□□□ -0.8
VMP1-210ENST00000589823 KIR2DL5AQ8N109 375 aa10.03□□□□□ -0.8
VMP1-210ENST00000589823 KIR2DL5BQ8NHK3 375 aa10.03□□□□□ -0.8
VMP1-210ENST00000589823 LYPD6BQ8NI32 183 aa10.03□□□□□ -0.8
VMP1-210ENST00000589823 CSTL1Q9H114 145 aa10.03□□□□□ -0.8
VMP1-210ENST00000589823 A8MTW9 85 aa10.02□□□□□ -0.81
VMP1-210ENST00000589823 C11orf94C9JXX5 98 aa10.02□□□□□ -0.81
VMP1-210ENST00000589823 F6UZH7 168 aa10.02□□□□□ -0.81
VMP1-210ENST00000589823 TAGLN2P37802 199 aaKnown RBP10.02□□□□□ -0.81
VMP1-210ENST00000589823 ATP5G3P48201 142 aa10.02□□□□□ -0.81
VMP1-210ENST00000589823 ERCC8Q13216 396 aa10.02□□□□□ -0.81
VMP1-210ENST00000589823 PMS2P11Q13670 270 aa10.02□□□□□ -0.81
VMP1-210ENST00000589823 GOLT1AQ6ZVE7 132 aa10.02□□□□□ -0.81
VMP1-210ENST00000589823 PCNPQ8WW12 178 aaKnown RBP10.02□□□□□ -0.81
VMP1-210ENST00000589823 LINC00477Q96M19 166 aa10.02□□□□□ -0.81
VMP1-210ENST00000589823 TXNDC17Q9BRA2 123 aa10.02□□□□□ -0.81
VMP1-210ENST00000589823 TCEAL7Q9BRU2 100 aa10.02□□□□□ -0.81
VMP1-210ENST00000589823 ATG101Q9BSB4 218 aa10.02□□□□□ -0.81
VMP1-210ENST00000589823 UBE2CO00762 179 aa10.01□□□□□ -0.81
VMP1-210ENST00000589823 CA1P00915 261 aaPredicted RBP10.01□□□□□ -0.81
VMP1-210ENST00000589823 TCRAP04437 139 aa10.01□□□□□ -0.81
VMP1-210ENST00000589823 HAGHQ16775 308 aa10.01□□□□□ -0.81
VMP1-210ENST00000589823 C9orf47Q6ZRZ4 202 aa10.01□□□□□ -0.81
VMP1-210ENST00000589823 CYB561D1Q8N8Q1 229 aa10.01□□□□□ -0.81
VMP1-210ENST00000589823 HIST1H2BAQ96A08 127 aa10.01□□□□□ -0.81
VMP1-210ENST00000589823 VGLL1Q99990 258 aa10.01□□□□□ -0.81
VMP1-210ENST00000589823 MEGF8Q7Z7M0 2845 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms