RNA–Protein interactions for RNA: ENST00000589537.1

NFIC-208, Transcript of nuclear factor I C, humanhuman

TSL 2

Gene NFIC, Length 977 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-208ENST00000589537 MRPL53Q96EL3 112 aaKnown RBP11.84□□□□□ -0.51
NFIC-208ENST00000589537 ODF3Q96PU9 254 aa11.84□□□□□ -0.51
NFIC-208ENST00000589537 TRAV12-2A0A075B6T6 113 aa11.83□□□□□ -0.52
NFIC-208ENST00000589537 H3BQ15 152 aa11.83□□□□□ -0.52
NFIC-208ENST00000589537 NHLH2Q02577 135 aa11.83□□□□□ -0.52
NFIC-208ENST00000589537 LINC01587Q99440 93 aa11.83□□□□□ -0.52
NFIC-208ENST00000589537 OR5AC2Q9NZP5 309 aa11.83□□□□□ -0.52
NFIC-208ENST00000589537 PRELID1Q9Y255 219 aa11.83□□□□□ -0.52
NFIC-208ENST00000589537 EPPK1P58107 5090 aaKnown RBP11.82□□□□□ -0.52
NFIC-208ENST00000589537 TRBV19A0A075B6N1 114 aa11.82□□□□□ -0.52
NFIC-208ENST00000589537 TRAV5A0A0B4J249 113 aa11.82□□□□□ -0.52
NFIC-208ENST00000589537 ZNF705GA8MUZ8 300 aaPredicted RBP11.82□□□□□ -0.52
NFIC-208ENST00000589537 H7BYZ3 331 aa11.82□□□□□ -0.52
NFIC-208ENST00000589537 SNRPCP09234 159 aaKnown RBP11.82□□□□□ -0.52
NFIC-208ENST00000589537 HIST1H1EP10412 219 aaKnown RBP11.82□□□□□ -0.52
NFIC-208ENST00000589537 H2BFSP57053 126 aa11.82□□□□□ -0.52
NFIC-208ENST00000589537 ZNF493Q6ZR52 646 aa11.82□□□□□ -0.52
NFIC-208ENST00000589537 PPP1R1CQ8WVI7 109 aa11.82□□□□□ -0.52
NFIC-208ENST00000589537 C16orf74Q96GX8 76 aa11.82□□□□□ -0.52
NFIC-208ENST00000589537 C17orf112F2Z3M2 114 aa11.81□□□□□ -0.52
NFIC-208ENST00000589537 H3BTX0 84 aa11.81□□□□□ -0.52
NFIC-208ENST00000589537 CLINT1Q14677 625 aa11.81□□□□□ -0.52
NFIC-208ENST00000589537 THAP6Q8TBB0 222 aa11.81□□□□□ -0.52
NFIC-208ENST00000589537 WDR61Q9GZS3 305 aaKnown RBP11.81□□□□□ -0.52
NFIC-208ENST00000589537 ZNF586Q9NXT0 402 aa11.81□□□□□ -0.52
NFIC-208ENST00000589537 TIMM9Q9Y5J7 89 aa11.81□□□□□ -0.52
NFIC-208ENST00000589537 NPIPB6E9PJ23 425 aa11.8□□□□□ -0.52
NFIC-208ENST00000589537 H0YIZ8 118 aa11.8□□□□□ -0.52
NFIC-208ENST00000589537 LEPP41159 167 aa11.8□□□□□ -0.52
NFIC-208ENST00000589537 POM121L12Q8N7R1 296 aa11.8□□□□□ -0.52
NFIC-208ENST00000589537 MRPL32Q9BYC8 188 aaKnown RBP11.8□□□□□ -0.52
NFIC-208ENST00000589537 AAMDCQ9H7C9 122 aa11.8□□□□□ -0.52
NFIC-208ENST00000589537 MPC2O95563 127 aa11.79□□□□□ -0.52
NFIC-208ENST00000589537 CCDC28AQ8IWP9 274 aa11.79□□□□□ -0.52
NFIC-208ENST00000589537 TMEM263Q8WUH6 116 aaKnown RBP11.79□□□□□ -0.52
NFIC-208ENST00000589537 ATP5SQ99766 215 aa11.79□□□□□ -0.52
NFIC-208ENST00000589537 TIMM8BQ9Y5J9 83 aaPredicted RBP11.79□□□□□ -0.52
NFIC-208ENST00000589537 PRAC2D3DTV9 90 aa11.78□□□□□ -0.52
NFIC-208ENST00000589537 HTN3P15516 51 aa11.78□□□□□ -0.52
NFIC-208ENST00000589537 C15orf53Q8NAA6 179 aa11.78□□□□□ -0.52
NFIC-208ENST00000589537 HSPB11Q9Y547 144 aa11.78□□□□□ -0.52
NFIC-208ENST00000589537 PLAC8L1A1L4L8 177 aa11.77□□□□□ -0.53
NFIC-208ENST00000589537 IFNA5P01569 189 aa11.77□□□□□ -0.53
NFIC-208ENST00000589537 AZU1P20160 251 aa11.77□□□□□ -0.53
NFIC-208ENST00000589537 GCSAMLQ5JQS6 135 aa11.77□□□□□ -0.53
NFIC-208ENST00000589537 GFI1BQ5VTD9 330 aa11.77□□□□□ -0.53
NFIC-208ENST00000589537 RNASE8Q8TDE3 154 aaKnown RBP11.77□□□□□ -0.53
NFIC-208ENST00000589537 LINC00477Q96M19 166 aa11.77□□□□□ -0.53
NFIC-208ENST00000589537 SLC25A2Q9BXI2 301 aa11.77□□□□□ -0.53
NFIC-208ENST00000589537 OR51M1Q9H341 326 aa11.77□□□□□ -0.53
NFIC-208ENST00000589537 PLA2G2EQ9NZK7 142 aa11.77□□□□□ -0.53
NFIC-208ENST00000589537 BIRC6Q9NR09 4857 aa11.76□□□□□ -0.53
NFIC-208ENST00000589537 NDUFB4O95168 129 aa11.76□□□□□ -0.53
NFIC-208ENST00000589537 PTTG1O95997 202 aa11.76□□□□□ -0.53
NFIC-208ENST00000589537 ATP5G1P05496 136 aa11.76□□□□□ -0.53
NFIC-208ENST00000589537 CT45A10P0DMU9 189 aa11.76□□□□□ -0.53
NFIC-208ENST00000589537 DEFB130BP0DP73 79 aa11.76□□□□□ -0.53
NFIC-208ENST00000589537 DEFB130AP0DP74 79 aa11.76□□□□□ -0.53
NFIC-208ENST00000589537 PYYP10082 97 aa11.76□□□□□ -0.53
NFIC-208ENST00000589537 HTN1P15515 57 aa11.76□□□□□ -0.53
NFIC-208ENST00000589537 RPL12P30050 165 aaKnown RBP11.76□□□□□ -0.53
NFIC-208ENST00000589537 ATP5G3P48201 142 aa11.76□□□□□ -0.53
NFIC-208ENST00000589537 RNF212Q495C1 297 aa11.76□□□□□ -0.53
NFIC-208ENST00000589537 TMEM88Q6PEY1 159 aa11.76□□□□□ -0.53
NFIC-208ENST00000589537 SCGB1C1Q8TD33 95 aa11.76□□□□□ -0.53
NFIC-208ENST00000589537 FUT9Q9Y231 359 aa11.76□□□□□ -0.53
NFIC-208ENST00000589537 CBY3A6NI87 242 aa11.75□□□□□ -0.53
NFIC-208ENST00000589537 M0R3E3 92 aa11.75□□□□□ -0.53
NFIC-208ENST00000589537 PRM2P04554 102 aa11.75□□□□□ -0.53
NFIC-208ENST00000589537 SLC25A5P05141 298 aaKnown RBP11.75□□□□□ -0.53
NFIC-208ENST00000589537 NBEAP1P0C6P0 100 aa11.75□□□□□ -0.53
NFIC-208ENST00000589537 MIR17HGQ75NE6 70 aa11.75□□□□□ -0.53
NFIC-208ENST00000589537 UBE2DNLQ8IWF7 75 aa11.75□□□□□ -0.53
NFIC-208ENST00000589537 BLNKQ8WV28 456 aa11.75□□□□□ -0.53
NFIC-208ENST00000589537 FAM167A-AS1Q96KT0 104 aa11.75□□□□□ -0.53
NFIC-208ENST00000589537 PYGO2Q9BRQ0 406 aa11.75□□□□□ -0.53
NFIC-208ENST00000589537 PAXXQ9BUH6 204 aa11.75□□□□□ -0.53
NFIC-208ENST00000589537 PARD6GQ9BYG4 376 aaPredicted RBP11.75□□□□□ -0.53
NFIC-208ENST00000589537 KMT2AQ03164 3969 aa11.75□□□□□ -0.53
NFIC-208ENST00000589537 NMBP08949 121 aa11.74□□□□□ -0.53
NFIC-208ENST00000589537 PRB4P10163 310 aaPredicted RBP11.74□□□□□ -0.53
NFIC-208ENST00000589537 MBD2Q9UBB5 411 aa11.74□□□□□ -0.53
NFIC-208ENST00000589537 SNURFLB1AK76 121 aa11.73□□□□□ -0.53
NFIC-208ENST00000589537 FAM3BP58499 235 aaPredicted RBP11.73□□□□□ -0.53
NFIC-208ENST00000589537 TAS2R45P59539 299 aa11.73□□□□□ -0.53
NFIC-208ENST00000589537 ICAM4Q14773 271 aa11.73□□□□□ -0.53
NFIC-208ENST00000589537 TMEM78Q5T7P6 136 aa11.73□□□□□ -0.53
NFIC-208ENST00000589537 C9orf47Q6ZRZ4 202 aa11.73□□□□□ -0.53
NFIC-208ENST00000589537 LYPD1Q8N2G4 141 aa11.73□□□□□ -0.53
NFIC-208ENST00000589537 RNF141Q8WVD5 230 aa11.73□□□□□ -0.53
NFIC-208ENST00000589537 NOP10Q9NPE3 64 aaKnown RBP11.73□□□□□ -0.53
NFIC-208ENST00000589537 VPS13DQ5THJ4 4388 aa11.72□□□□□ -0.53
NFIC-208ENST00000589537 TRAV12-3A0A0B4J271 114 aa11.72□□□□□ -0.53
NFIC-208ENST00000589537 C7orf71A4D174 169 aa11.72□□□□□ -0.53
NFIC-208ENST00000589537 KLLNB2CW77 178 aa11.72□□□□□ -0.53
NFIC-208ENST00000589537 OR7C2O60412 319 aa11.72□□□□□ -0.53
NFIC-208ENST00000589537 KIR3DS1Q14943 382 aa11.72□□□□□ -0.53
NFIC-208ENST00000589537 KHDC3LQ587J8 217 aa11.72□□□□□ -0.53
NFIC-208ENST00000589537 FFAR4Q5NUL3 377 aa11.72□□□□□ -0.53
NFIC-208ENST00000589537 LINC00336Q6ZUF6 198 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms