RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 OR10P1Q8NGE3 313 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 OR1L8Q8NGR8 309 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 HIST1H2BAQ96A08 127 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 SEC11CQ9BY50 192 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 ARV1Q9H2C2 271 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 WFDC1Q9HC57 220 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 GNG7O60262 68 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 DEDDO75618 318 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 IFNA5P01569 189 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 FGF7P21781 194 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 LGALS7P47929 136 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 SELENOTP62341 195 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 PDLIM3Q53GG5 364 aaPredicted RBP2.49□□□□□ -2.01
ZNF540-207ENST00000589285 LCE3CQ5T5A8 94 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 SAMD13Q5VXD3 122 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 BAP18Q8IXM2 172 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 TEX29Q8N6K0 151 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.49□□□□□ -2.01
ZNF540-207ENST00000589285 C5orf56Q8N8D9 126 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 LRTM2Q8N967 370 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 OR5AU1Q8NGC0 362 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 OR4D5Q8NGN0 318 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 OR1L6Q8NGR2 347 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 OR1B1Q8NGR6 318 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 FAM213BQ8TBF2 198 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 BLNKQ8WV28 456 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 ADTRPQ96IZ2 230 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 VPREB3Q9UKI3 123 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 ZFP30Q9Y2G7 519 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 MOB4Q9Y3A3 225 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 IGKV1OR2-108A0A075B7D4 117 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 TRAV5A0A0B4J249 113 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 TRAV41A0A0B4J266 112 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 IGLC7A0M8Q6 106 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 C15orf62A8K5M9 175 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 F6UZH7 168 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 F8WDY8 70 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 K7ERU9 68 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 M0R036 132 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 PHOX2AO14813 284 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 OR10J1P30954 320 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 SRPXP78539 464 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 CYCSP99999 105 aaKnown RBP2.49□□□□□ -2.01
ZNF540-207ENST00000589285 EIF4EBP1Q13541 118 aaPredicted RBP2.49□□□□□ -2.01
ZNF540-207ENST00000589285 COX19Q49B96 90 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 PRSS54Q6PEW0 395 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 ZNF562Q6V9R5 426 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 ERASQ7Z444 233 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 OR2G3Q8NGZ4 309 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 VSTM2AQ8TAG5 236 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 PHYHIPLQ96FC7 376 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 CHRDL1Q9BU40 450 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 SMCO4Q9NRQ5 59 aa2.49□□□□□ -2.01
ZNF540-207ENST00000589285 ZNF705EA8MWA4 302 aaPredicted RBP2.48□□□□□ -2.01
ZNF540-207ENST00000589285 SEC14L6B5MCN3 397 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 E5RGE8 158 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 M0QXV9 152 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 FGF16O43320 207 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 MT-ND4LP03901 98 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 IL4P05112 153 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 CD28P10747 220 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 VDAC2P45880 294 aaPredicted RBP2.48□□□□□ -2.01
ZNF540-207ENST00000589285 CDX1P47902 265 aaPredicted RBP2.48□□□□□ -2.01
ZNF540-207ENST00000589285 RAB9AP51151 201 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 RND3P61587 244 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 VWC2Q2TAL6 325 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 TIGITQ495A1 244 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 AKR1C8PQ5T2L2 129 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 MINOS1Q5TGZ0 78 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 SPATA31B1PQ5VZV4 182 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 BTNL8Q6UX41 500 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 LINC00311Q8N616 119 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 KLHL30-AS1Q8NEE0 82 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 OR10D4PQ8NGN7 298 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 C11orf45Q8TAV5 145 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 SCGB1C1Q8TD33 95 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 ASB13Q8WXK3 278 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 LSM10Q969L4 123 aaKnown RBP2.48□□□□□ -2.01
ZNF540-207ENST00000589285 VGLL1Q99990 258 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 TUBA4BQ9H853 241 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 LINC00574Q9H8X3 128 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 TMEM14BQ9NUH8 114 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 PITPNC1Q9UKF7 332 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 PRNDQ9UKY0 176 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 MINOS1-NBL1R4GNA1 71 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 STAB2Q8WWQ8 2551 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 OR7C2O60412 319 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 PET100P0DJ07 73 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 RNASE2P10153 161 aaKnown RBP2.48□□□□□ -2.01
ZNF540-207ENST00000589285 SLC25A6P12236 298 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 ATP6V0CP27449 155 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 SYNJ2BPP57105 145 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 PRCDQ00LT1 54 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 PAX5Q02548 391 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 FAM78BQ5VT40 261 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 ZNF709Q8N972 641 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 NHLRC2Q8NBF2 726 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.48□□□□□ -2.01
ZNF540-207ENST00000589285 OR1S2Q8NGQ3 325 aa2.48□□□□□ -2.01
ZNF540-207ENST00000589285 TMEM167AQ8TBQ9 72 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms