RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 TRAV34A0A0B4J273 112 aa9.2□□□□□ -0.94
CCBE1-203ENST00000589116 COLCA2A8K830 154 aa9.2□□□□□ -0.94
CCBE1-203ENST00000589116 DIRC3C9JPN6 131 aa9.2□□□□□ -0.94
CCBE1-203ENST00000589116 GCGP01275 180 aa9.2□□□□□ -0.94
CCBE1-203ENST00000589116 LTAP01374 205 aa9.2□□□□□ -0.94
CCBE1-203ENST00000589116 TCTEX1D4Q5JR98 221 aa9.2□□□□□ -0.94
CCBE1-203ENST00000589116 GOLT1AQ6ZVE7 132 aa9.2□□□□□ -0.94
CCBE1-203ENST00000589116 C1QL4Q86Z23 238 aa9.2□□□□□ -0.94
CCBE1-203ENST00000589116 LINC01006Q8NI28 216 aa9.2□□□□□ -0.94
CCBE1-203ENST00000589116 MRPL53Q96EL3 112 aaKnown RBP9.2□□□□□ -0.94
CCBE1-203ENST00000589116 YPEL4Q96NS1 127 aa9.2□□□□□ -0.94
CCBE1-203ENST00000589116 AURKAIP1Q9NWT8 199 aaPredicted RBP9.2□□□□□ -0.94
CCBE1-203ENST00000589116 SMPXQ9UHP9 88 aa9.2□□□□□ -0.94
CCBE1-203ENST00000589116 M0R3E3 92 aa9.19□□□□□ -0.94
CCBE1-203ENST00000589116 HOXD3P31249 432 aaPredicted RBP9.19□□□□□ -0.94
CCBE1-203ENST00000589116 TM4SF20Q53R12 229 aa9.19□□□□□ -0.94
CCBE1-203ENST00000589116 C8orf86Q6ZUL3 223 aa9.19□□□□□ -0.94
CCBE1-203ENST00000589116 Q86TA4 180 aa9.19□□□□□ -0.94
CCBE1-203ENST00000589116 OR10G8Q8NGN5 311 aa9.19□□□□□ -0.94
CCBE1-203ENST00000589116 RHPN1-AS1Q9BWJ2 59 aa9.19□□□□□ -0.94
CCBE1-203ENST00000589116 BIN3Q9NQY0 253 aa9.19□□□□□ -0.94
CCBE1-203ENST00000589116 TMEM213A2RRL7 107 aa9.18□□□□□ -0.94
CCBE1-203ENST00000589116 LINC01619G3V211 115 aa9.18□□□□□ -0.94
CCBE1-203ENST00000589116 CHEK1O14757 476 aa9.18□□□□□ -0.94
CCBE1-203ENST00000589116 TCF21O43680 179 aa9.18□□□□□ -0.94
CCBE1-203ENST00000589116 IGLV2-11P01706 119 aa9.18□□□□□ -0.94
CCBE1-203ENST00000589116 S100PP25815 95 aa9.18□□□□□ -0.94
CCBE1-203ENST00000589116 ELOBQ15370 118 aa9.18□□□□□ -0.94
CCBE1-203ENST00000589116 PSG3Q16557 428 aa9.18□□□□□ -0.94
CCBE1-203ENST00000589116 IMMP2LQ96T52 175 aa9.18□□□□□ -0.94
CCBE1-203ENST00000589116 MLST8Q9BVC4 326 aa9.18□□□□□ -0.94
CCBE1-203ENST00000589116 OSTCQ9NRP0 149 aa9.18□□□□□ -0.94
CCBE1-203ENST00000589116 MGST1P10620 155 aaKnown RBP9.17□□□□□ -0.94
CCBE1-203ENST00000589116 ERVFC1-1P60608 527 aa9.17□□□□□ -0.94
CCBE1-203ENST00000589116 FLI1Q01543 452 aaPredicted RBP9.17□□□□□ -0.94
CCBE1-203ENST00000589116 KRTAP24-1Q3LI83 254 aa9.17□□□□□ -0.94
CCBE1-203ENST00000589116 KHDC1LQ5JSQ8 128 aa9.17□□□□□ -0.94
CCBE1-203ENST00000589116 SAMD13Q5VXD3 122 aa9.17□□□□□ -0.94
CCBE1-203ENST00000589116 FAM231DQ6ZW35 169 aa9.17□□□□□ -0.94
CCBE1-203ENST00000589116 FAM24BQ8N5W8 94 aa9.17□□□□□ -0.94
CCBE1-203ENST00000589116 ZFP30Q9Y2G7 519 aa9.17□□□□□ -0.94
CCBE1-203ENST00000589116 RBAKDNA6NC62 111 aa9.16□□□□□ -0.94
CCBE1-203ENST00000589116 SYNJ2BPP57105 145 aa9.16□□□□□ -0.94
CCBE1-203ENST00000589116 OR5I1Q13606 314 aa9.16□□□□□ -0.94
CCBE1-203ENST00000589116 KLF5Q13887 457 aaPredicted RBP9.16□□□□□ -0.94
CCBE1-203ENST00000589116 KCNIP4Q6PIL6 250 aa9.16□□□□□ -0.94
CCBE1-203ENST00000589116 TMEM183AQ8IXX5 376 aa9.16□□□□□ -0.94
CCBE1-203ENST00000589116 KLHL30-AS1Q8NEE0 82 aa9.16□□□□□ -0.94
CCBE1-203ENST00000589116 DPF1Q92782 380 aa9.16□□□□□ -0.94
CCBE1-203ENST00000589116 NRN1Q9NPD7 142 aa9.16□□□□□ -0.94
CCBE1-203ENST00000589116 URGCP-MRPS24S4R325 110 aa9.16□□□□□ -0.94
CCBE1-203ENST00000589116 CUBNO60494 3623 aa9.16□□□□□ -0.94
CCBE1-203ENST00000589116 TRBV24-1A0A075B6N3 115 aa9.16□□□□□ -0.94
CCBE1-203ENST00000589116 TRAV8-1A0A0A6YYK1 113 aa9.16□□□□□ -0.94
CCBE1-203ENST00000589116 TRAV8-2A0A0B4J237 113 aa9.16□□□□□ -0.94
CCBE1-203ENST00000589116 PFN1P07737 140 aaKnown RBP9.16□□□□□ -0.94
CCBE1-203ENST00000589116 IBA57Q5T440 356 aaKnown RBP9.16□□□□□ -0.94
CCBE1-203ENST00000589116 LCN12Q6JVE5 192 aa9.16□□□□□ -0.94
CCBE1-203ENST00000589116 NHLRC2Q8NBF2 726 aa9.16□□□□□ -0.94
CCBE1-203ENST00000589116 OR11H1Q8NG94 326 aa9.16□□□□□ -0.94
CCBE1-203ENST00000589116 OR1N2Q8NGR9 330 aa9.16□□□□□ -0.94
CCBE1-203ENST00000589116 BTF3L4Q96K17 158 aa9.16□□□□□ -0.94
CCBE1-203ENST00000589116 C16orf92Q96LL3 132 aa9.16□□□□□ -0.94
CCBE1-203ENST00000589116 SGK494Q96LW2 274 aa9.16□□□□□ -0.94
CCBE1-203ENST00000589116 PSG8Q9UQ74 426 aa9.16□□□□□ -0.94
CCBE1-203ENST00000589116 M0QZ24 198 aa9.15□□□□□ -0.94
CCBE1-203ENST00000589116 SOCS3O14543 225 aa9.15□□□□□ -0.94
CCBE1-203ENST00000589116 FOLR2P14207 255 aa9.15□□□□□ -0.94
CCBE1-203ENST00000589116 RAB5AP20339 215 aa9.15□□□□□ -0.94
CCBE1-203ENST00000589116 C18orf65Q6ZTR6 163 aa9.15□□□□□ -0.94
CCBE1-203ENST00000589116 PRNTQ86SH4 94 aa9.15□□□□□ -0.94
CCBE1-203ENST00000589116 ZNF492Q9P255 531 aa9.15□□□□□ -0.94
CCBE1-203ENST00000589116 TMA7Q9Y2S6 64 aaKnown RBP9.15□□□□□ -0.94
CCBE1-203ENST00000589116 RNF114Q9Y508 228 aa9.15□□□□□ -0.94
CCBE1-203ENST00000589116 TSSC4Q9Y5U2 329 aaPredicted RBP9.15□□□□□ -0.94
CCBE1-203ENST00000589116 V9GYV3 84 aa9.15□□□□□ -0.94
CCBE1-203ENST00000589116 ANK2Q01484 3957 aa9.15□□□□□ -0.94
CCBE1-203ENST00000589116 TRAV9-1A0A075B6T8 112 aa9.14□□□□□ -0.95
CCBE1-203ENST00000589116 C2orf70A6NJV1 201 aa9.14□□□□□ -0.95
CCBE1-203ENST00000589116 HLA-DMBP28068 263 aa9.14□□□□□ -0.95
CCBE1-203ENST00000589116 FOXL1Q12952 345 aa9.14□□□□□ -0.95
CCBE1-203ENST00000589116 DEFB136Q30KP8 78 aa9.14□□□□□ -0.95
CCBE1-203ENST00000589116 TCF24Q7RTU0 167 aa9.14□□□□□ -0.95
CCBE1-203ENST00000589116 PYGO2Q9BRQ0 406 aa9.14□□□□□ -0.95
CCBE1-203ENST00000589116 IL36BQ9NZH7 164 aa9.14□□□□□ -0.95
CCBE1-203ENST00000589116 PEMTQ9UBM1 199 aa9.14□□□□□ -0.95
CCBE1-203ENST00000589116 MLXQ9UH92 298 aa9.14□□□□□ -0.95
CCBE1-203ENST00000589116 IGKV2-40A0A087WW87 121 aaPredicted RBP9.13□□□□□ -0.95
CCBE1-203ENST00000589116 IGKV2D-40P01614 121 aaPredicted RBP9.13□□□□□ -0.95
CCBE1-203ENST00000589116 CXCL1P09341 107 aa9.13□□□□□ -0.95
CCBE1-203ENST00000589116 CD28P10747 220 aa9.13□□□□□ -0.95
CCBE1-203ENST00000589116 SLURP1P55000 103 aa9.13□□□□□ -0.95
CCBE1-203ENST00000589116 PROK1P58294 105 aa9.13□□□□□ -0.95
CCBE1-203ENST00000589116 RPL11P62913 178 aaKnown RBP9.13□□□□□ -0.95
CCBE1-203ENST00000589116 SAPCD1Q5SSQ6 148 aa9.13□□□□□ -0.95
CCBE1-203ENST00000589116 IGFL4Q6B9Z1 124 aa9.13□□□□□ -0.95
CCBE1-203ENST00000589116 COX8CQ7Z4L0 72 aa9.13□□□□□ -0.95
CCBE1-203ENST00000589116 RNF182Q8N6D2 247 aa9.13□□□□□ -0.95
CCBE1-203ENST00000589116 RNASE7Q9H1E1 156 aaKnown RBP9.13□□□□□ -0.95
CCBE1-203ENST00000589116 TGIF2-C20orf24A0A0A6YYL0 155 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms