RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 IGKV1-5P01602 117 aa6.3□□□□□ -1.4
LAMA3-210ENST00000588770 GDF5OSQ5U4N7 250 aa6.3□□□□□ -1.4
LAMA3-210ENST00000588770 DEFB124Q8NES8 71 aa6.3□□□□□ -1.4
LAMA3-210ENST00000588770 TMEM158Q8WZ71 300 aa6.3□□□□□ -1.4
LAMA3-210ENST00000588770 VKORC1Q9BQB6 163 aa6.3□□□□□ -1.4
LAMA3-210ENST00000588770 METRNQ9UJH8 293 aa6.3□□□□□ -1.4
LAMA3-210ENST00000588770 NCKAP5O14513 1909 aa6.29□□□□□ -1.4
LAMA3-210ENST00000588770 FKBP2P26885 142 aaKnown RBP6.29□□□□□ -1.4
LAMA3-210ENST00000588770 TRIP6Q15654 476 aaKnown RBP6.29□□□□□ -1.4
LAMA3-210ENST00000588770 COX14Q96I36 57 aa6.29□□□□□ -1.4
LAMA3-210ENST00000588770 ADAMTSL1Q8N6G6 1762 aa6.29□□□□□ -1.4
LAMA3-210ENST00000588770 SHISA9B4DS77 424 aa6.29□□□□□ -1.4
LAMA3-210ENST00000588770 D6R8Y8 96 aa6.29□□□□□ -1.4
LAMA3-210ENST00000588770 CR1LQ2VPA4 569 aa6.29□□□□□ -1.4
LAMA3-210ENST00000588770 C6orf226Q5I0X4 101 aa6.29□□□□□ -1.4
LAMA3-210ENST00000588770 MUSTN1Q8IVN3 82 aa6.29□□□□□ -1.4
LAMA3-210ENST00000588770 METTL26Q96S19 204 aa6.29□□□□□ -1.4
LAMA3-210ENST00000588770 TMEM74BQ9NUR3 256 aa6.29□□□□□ -1.4
LAMA3-210ENST00000588770 SBF1O95248 1867 aa6.29□□□□□ -1.4
LAMA3-210ENST00000588770 PEAR1Q5VY43 1037 aaPredicted RBP6.29□□□□□ -1.4
LAMA3-210ENST00000588770 TMEM86BQ8N661 226 aa6.29□□□□□ -1.4
LAMA3-210ENST00000588770 NPIPB3Q92617 1050 aa6.29□□□□□ -1.4
LAMA3-210ENST00000588770 IMUPQ9GZP8 106 aa6.29□□□□□ -1.4
LAMA3-210ENST00000588770 ATG2AQ2TAZ0 1938 aa6.29□□□□□ -1.4
LAMA3-210ENST00000588770 TRAV8-3A0A0A6YYJ7 113 aa6.29□□□□□ -1.4
LAMA3-210ENST00000588770 EGR2P11161 476 aaPredicted RBP6.29□□□□□ -1.4
LAMA3-210ENST00000588770 ASPHD1Q5U4P2 390 aa6.29□□□□□ -1.4
LAMA3-210ENST00000588770 TREML4Q6UXN2 200 aa6.29□□□□□ -1.4
LAMA3-210ENST00000588770 HCFC1P51610 2035 aa6.29□□□□□ -1.4
LAMA3-210ENST00000588770 NCOR1O75376 2440 aa6.28□□□□□ -1.4
LAMA3-210ENST00000588770 PCDH15Q96QU1 1955 aa6.28□□□□□ -1.4
LAMA3-210ENST00000588770 TRAV40A0A0B4J280 105 aa6.28□□□□□ -1.4
LAMA3-210ENST00000588770 CLPSL1A2RUU4 121 aa6.28□□□□□ -1.4
LAMA3-210ENST00000588770 IGHG3P01860 377 aa6.28□□□□□ -1.4
LAMA3-210ENST00000588770 HLA-DRB4P13762 266 aa6.28□□□□□ -1.4
LAMA3-210ENST00000588770 GFERP55789 205 aa6.28□□□□□ -1.4
LAMA3-210ENST00000588770 DEFB108BQ8NET1 73 aa6.28□□□□□ -1.4
LAMA3-210ENST00000588770 TRGV9Q99603 122 aa6.28□□□□□ -1.4
LAMA3-210ENST00000588770 HLA-DRB4X5D2U9 266 aa6.28□□□□□ -1.4
LAMA3-210ENST00000588770 IGHG2P01859 326 aa6.28□□□□□ -1.4
LAMA3-210ENST00000588770 FGF12P61328 243 aa6.28□□□□□ -1.4
LAMA3-210ENST00000588770 LYZP61626 148 aa6.28□□□□□ -1.4
LAMA3-210ENST00000588770 ANK1P16157 1881 aa6.28□□□□□ -1.4
LAMA3-210ENST00000588770 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.28□□□□□ -1.4
LAMA3-210ENST00000588770 K7ERS5 55 aa6.28□□□□□ -1.4
LAMA3-210ENST00000588770 IGHV3OR15-7A0A075B7D8 119 aa6.28□□□□□ -1.4
LAMA3-210ENST00000588770 IGHV3-48P01763 117 aa6.28□□□□□ -1.4
LAMA3-210ENST00000588770 HLA-DMBP28068 263 aa6.28□□□□□ -1.4
LAMA3-210ENST00000588770 SMCPP49901 116 aaPredicted RBP6.28□□□□□ -1.4
LAMA3-210ENST00000588770 SLC25A48Q6ZT89 311 aaKnown RBP6.28□□□□□ -1.4
LAMA3-210ENST00000588770 SLC22A18ASQ8N1D0 253 aa6.28□□□□□ -1.4
LAMA3-210ENST00000588770 URB1-AS1Q96HZ7 61 aa6.28□□□□□ -1.4
LAMA3-210ENST00000588770 PYGO1Q9Y3Y4 419 aa6.28□□□□□ -1.4
LAMA3-210ENST00000588770 ZGRF1Q86YA3 2104 aa6.27□□□□□ -1.41
LAMA3-210ENST00000588770 IQCF6A8MYZ5 107 aa6.27□□□□□ -1.41
LAMA3-210ENST00000588770 PRDM6Q9NQX0 595 aa6.27□□□□□ -1.41
LAMA3-210ENST00000588770 SPTBN2O15020 2390 aa6.27□□□□□ -1.41
LAMA3-210ENST00000588770 ROS1P08922 2347 aa6.27□□□□□ -1.41
LAMA3-210ENST00000588770 PRO1854Q9UHT4 67 aa6.27□□□□□ -1.41
LAMA3-210ENST00000588770 FAM90A5PA8MXJ8 464 aa6.27□□□□□ -1.41
LAMA3-210ENST00000588770 RNASE2P10153 161 aaKnown RBP6.27□□□□□ -1.41
LAMA3-210ENST00000588770 TCF15Q12870 199 aa6.27□□□□□ -1.41
LAMA3-210ENST00000588770 C3orf36Q3SXR2 165 aa6.27□□□□□ -1.41
LAMA3-210ENST00000588770 SUMO4Q6EEV6 95 aa6.27□□□□□ -1.41
LAMA3-210ENST00000588770 ZNF407Q9C0G0 2248 aa6.27□□□□□ -1.41
LAMA3-210ENST00000588770 GREB1Q4ZG55 1949 aa6.27□□□□□ -1.41
LAMA3-210ENST00000588770 PIP4P1Q86T03 277 aa6.26□□□□□ -1.41
LAMA3-210ENST00000588770 MYO16Q9Y6X6 1858 aa6.26□□□□□ -1.41
LAMA3-210ENST00000588770 IGHV3-21A0A0B4J1V1 117 aa6.26□□□□□ -1.41
LAMA3-210ENST00000588770 FAM90A10PA6NDY2 464 aa6.26□□□□□ -1.41
LAMA3-210ENST00000588770 FAM90A24PP0C7X0 464 aa6.26□□□□□ -1.41
LAMA3-210ENST00000588770 HAMPP81172 84 aa6.26□□□□□ -1.41
LAMA3-210ENST00000588770 MLST8Q9BVC4 326 aa6.26□□□□□ -1.41
LAMA3-210ENST00000588770 TEX49A0A1B0GTD5 131 aa6.26□□□□□ -1.41
LAMA3-210ENST00000588770 J3QQQ9 107 aa6.26□□□□□ -1.41
LAMA3-210ENST00000588770 ZNF503Q96F45 646 aa6.26□□□□□ -1.41
LAMA3-210ENST00000588770 GFRA4Q9GZZ7 299 aa6.26□□□□□ -1.41
LAMA3-210ENST00000588770 HELZP42694 1942 aaKnown RBP6.26□□□□□ -1.41
LAMA3-210ENST00000588770 OVOL1O14753 267 aa6.26□□□□□ -1.41
LAMA3-210ENST00000588770 CRYGDP07320 174 aa6.26□□□□□ -1.41
LAMA3-210ENST00000588770 ATP5EP56381 51 aaPredicted RBP6.26□□□□□ -1.41
LAMA3-210ENST00000588770 Q8IYB0 196 aa6.26□□□□□ -1.41
LAMA3-210ENST00000588770 TMEM190Q8WZ59 177 aa6.26□□□□□ -1.41
LAMA3-210ENST00000588770 A0A1W2PQD3 144 aa6.25□□□□□ -1.41
LAMA3-210ENST00000588770 TMEM89A2RUT3 159 aa6.25□□□□□ -1.41
LAMA3-210ENST00000588770 IGKV2D-26A0A0A0MRZ7 120 aa6.25□□□□□ -1.41
LAMA3-210ENST00000588770 C17orf98A8MV24 154 aa6.25□□□□□ -1.41
LAMA3-210ENST00000588770 LGALS9O00182 355 aa6.25□□□□□ -1.41
LAMA3-210ENST00000588770 LINC01620Q4KN68 170 aa6.25□□□□□ -1.41
LAMA3-210ENST00000588770 RPUSD1Q9UJJ7 312 aaKnown RBP6.25□□□□□ -1.41
LAMA3-210ENST00000588770 C15orf65H3BRN8 121 aa6.25□□□□□ -1.41
LAMA3-210ENST00000588770 CHKB-CPT1BH3BT56 60 aa6.25□□□□□ -1.41
LAMA3-210ENST00000588770 APELAP0DMC3 54 aa6.25□□□□□ -1.41
LAMA3-210ENST00000588770 CCL1P22362 96 aa6.25□□□□□ -1.41
LAMA3-210ENST00000588770 ARFGEF3Q5TH69 2177 aa6.25□□□□□ -1.41
LAMA3-210ENST00000588770 RPS19BP1Q86WX3 136 aaKnown RBP6.25□□□□□ -1.41
LAMA3-210ENST00000588770 EXOC3-AS1Q8N2X6 119 aa6.25□□□□□ -1.41
LAMA3-210ENST00000588770 FMC1Q96HJ9 113 aa6.25□□□□□ -1.41
LAMA3-210ENST00000588770 SIP14410 1827 aa6.25□□□□□ -1.41
LAMA3-210ENST00000588770 CGB1A6NKQ9 187 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms