RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 RPUSD4Q96CM3 377 aaKnown RBP10.52□□□□□ -0.73
CCDC130-208ENST00000588071 MRPL53Q96EL3 112 aaKnown RBP10.52□□□□□ -0.73
CCDC130-208ENST00000588071 PRR25Q96S07 402 aa10.52□□□□□ -0.73
CCDC130-208ENST00000588071 EIF5A2Q9GZV4 153 aaKnown RBP10.52□□□□□ -0.73
CCDC130-208ENST00000588071 VAX2Q9UIW0 290 aa10.52□□□□□ -0.73
CCDC130-208ENST00000588071 RPH3ALQ9UNE2 315 aa10.52□□□□□ -0.73
CCDC130-208ENST00000588071 C11orf94C9JXX5 98 aa10.51□□□□□ -0.73
CCDC130-208ENST00000588071 PRB4P10163 310 aaPredicted RBP10.51□□□□□ -0.73
CCDC130-208ENST00000588071 BCL2P10415 239 aa10.51□□□□□ -0.73
CCDC130-208ENST00000588071 ATP5G3P48201 142 aa10.51□□□□□ -0.73
CCDC130-208ENST00000588071 ODF3L2Q3SX64 289 aa10.51□□□□□ -0.73
CCDC130-208ENST00000588071 APRG1Q8IVJ8 170 aa10.51□□□□□ -0.73
CCDC130-208ENST00000588071 C5orf17Q8NAS9 161 aa10.51□□□□□ -0.73
CCDC130-208ENST00000588071 RARRES2Q99969 163 aa10.51□□□□□ -0.73
CCDC130-208ENST00000588071 FAM110AQ9BQ89 295 aa10.51□□□□□ -0.73
CCDC130-208ENST00000588071 TXNDC17Q9BRA2 123 aa10.51□□□□□ -0.73
CCDC130-208ENST00000588071 EPDR1Q9UM22 224 aa10.51□□□□□ -0.73
CCDC130-208ENST00000588071 AGRNO00468 2067 aa10.5□□□□□ -0.73
CCDC130-208ENST00000588071 LOC102723971A0A1B0GUV8 181 aa10.5□□□□□ -0.73
CCDC130-208ENST00000588071 GGTLC3B5MD39 225 aa10.5□□□□□ -0.73
CCDC130-208ENST00000588071 DIRC3C9JPN6 131 aa10.5□□□□□ -0.73
CCDC130-208ENST00000588071 F6UZH7 168 aa10.5□□□□□ -0.73
CCDC130-208ENST00000588071 GNG5P63218 68 aa10.5□□□□□ -0.73
CCDC130-208ENST00000588071 FAM210AQ96ND0 272 aa10.5□□□□□ -0.73
CCDC130-208ENST00000588071 KNCNA6PVL3 124 aa10.49□□□□□ -0.73
CCDC130-208ENST00000588071 PRAC2D3DTV9 90 aa10.49□□□□□ -0.73
CCDC130-208ENST00000588071 DEFB1P60022 68 aa10.49□□□□□ -0.73
CCDC130-208ENST00000588071 MEF2BQ02080 365 aaPredicted RBP10.49□□□□□ -0.73
CCDC130-208ENST00000588071 ZNF124Q15973 351 aa10.49□□□□□ -0.73
CCDC130-208ENST00000588071 TOR2AQ5JU69 321 aa10.49□□□□□ -0.73
CCDC130-208ENST00000588071 ACTL10Q5JWF8 245 aa10.49□□□□□ -0.73
CCDC130-208ENST00000588071 FOXI2Q6ZQN5 318 aa10.49□□□□□ -0.73
CCDC130-208ENST00000588071 CCDC28AQ8IWP9 274 aa10.49□□□□□ -0.73
CCDC130-208ENST00000588071 ARL6IP6Q8N6S5 226 aa10.49□□□□□ -0.73
CCDC130-208ENST00000588071 OR10J6PQ8NGY7 276 aa10.49□□□□□ -0.73
CCDC130-208ENST00000588071 SAV1Q9H4B6 383 aaPredicted RBP10.49□□□□□ -0.73
CCDC130-208ENST00000588071 ANK2Q01484 3957 aa10.48□□□□□ -0.73
CCDC130-208ENST00000588071 F6UB75 175 aa10.48□□□□□ -0.73
CCDC130-208ENST00000588071 K7EQM0 130 aa10.48□□□□□ -0.73
CCDC130-208ENST00000588071 TCRAP04437 139 aa10.48□□□□□ -0.73
CCDC130-208ENST00000588071 ZNF705DP0CH99 300 aaPredicted RBP10.48□□□□□ -0.73
CCDC130-208ENST00000588071 ZNF705BP0CI00 300 aaPredicted RBP10.48□□□□□ -0.73
CCDC130-208ENST00000588071 HIST1H1AQ02539 215 aaPredicted RBP10.48□□□□□ -0.73
CCDC130-208ENST00000588071 PEA15Q15121 130 aa10.48□□□□□ -0.73
CCDC130-208ENST00000588071 ZNF506Q5JVG8 444 aa10.48□□□□□ -0.73
CCDC130-208ENST00000588071 GOLT1AQ6ZVE7 132 aa10.48□□□□□ -0.73
CCDC130-208ENST00000588071 Q8N1Y9 231 aa10.48□□□□□ -0.73
CCDC130-208ENST00000588071 DEFB125Q8N687 156 aa10.48□□□□□ -0.73
CCDC130-208ENST00000588071 OR8A1Q8NGG7 326 aa10.48□□□□□ -0.73
CCDC130-208ENST00000588071 HIST1H2BAQ96A08 127 aa10.48□□□□□ -0.73
CCDC130-208ENST00000588071 TCEAL7Q9BRU2 100 aa10.48□□□□□ -0.73
CCDC130-208ENST00000588071 WFDC10AQ9H1F0 79 aa10.48□□□□□ -0.73
CCDC130-208ENST00000588071 C19orf73Q9NVV2 129 aa10.48□□□□□ -0.73
CCDC130-208ENST00000588071 IGKV2-40A0A087WW87 121 aaPredicted RBP10.47□□□□□ -0.73
CCDC130-208ENST00000588071 PEX7O00628 323 aa10.47□□□□□ -0.73
CCDC130-208ENST00000588071 PDE6DO43924 150 aa10.47□□□□□ -0.73
CCDC130-208ENST00000588071 DUSP14O95147 198 aaKnown RBP10.47□□□□□ -0.73
CCDC130-208ENST00000588071 IGKV2D-40P01614 121 aaPredicted RBP10.47□□□□□ -0.73
CCDC130-208ENST00000588071 KPRPQ5T749 579 aaPredicted RBP10.47□□□□□ -0.73
CCDC130-208ENST00000588071 GDF5OSQ5U4N7 250 aa10.47□□□□□ -0.73
CCDC130-208ENST00000588071 STHQ8IWL8 128 aa10.47□□□□□ -0.73
CCDC130-208ENST00000588071 OR4B1Q8NGF8 309 aa10.47□□□□□ -0.73
CCDC130-208ENST00000588071 ATG101Q9BSB4 218 aa10.47□□□□□ -0.73
CCDC130-208ENST00000588071 TUBA4BQ9H853 241 aa10.47□□□□□ -0.73
CCDC130-208ENST00000588071 PPP1R14DQ9NXH3 145 aa10.47□□□□□ -0.73
CCDC130-208ENST00000588071 VWFP04275 2813 aa10.46□□□□□ -0.73
CCDC130-208ENST00000588071 A0A0J9YX75 114 aa10.46□□□□□ -0.73
CCDC130-208ENST00000588071 SERTM2A0A1B0GWG4 89 aa10.46□□□□□ -0.73
CCDC130-208ENST00000588071 HLA-DRB4P13762 266 aa10.46□□□□□ -0.73
CCDC130-208ENST00000588071 ERCC8Q13216 396 aa10.46□□□□□ -0.73
CCDC130-208ENST00000588071 CYB561D1Q8N8Q1 229 aa10.46□□□□□ -0.73
CCDC130-208ENST00000588071 LINC00477Q96M19 166 aa10.46□□□□□ -0.73
CCDC130-208ENST00000588071 SRD5A3Q9H8P0 318 aa10.46□□□□□ -0.73
CCDC130-208ENST00000588071 HLA-DRB4X5D2U9 266 aa10.46□□□□□ -0.73
CCDC130-208ENST00000588071 CMYA5Q8N3K9 4069 aa10.46□□□□□ -0.74
CCDC130-208ENST00000588071 SCO2A0A1W2PP80 73 aa10.45□□□□□ -0.74
CCDC130-208ENST00000588071 RAB19A4D1S5 217 aa10.45□□□□□ -0.74
CCDC130-208ENST00000588071 RBAKDNA6NC62 111 aa10.45□□□□□ -0.74
CCDC130-208ENST00000588071 H3BMM0 161 aa10.45□□□□□ -0.74
CCDC130-208ENST00000588071 IGKV3-20P01619 116 aa10.45□□□□□ -0.74
CCDC130-208ENST00000588071 AKR1C3P42330 323 aa10.45□□□□□ -0.74
CCDC130-208ENST00000588071 CNN1P51911 297 aaKnown RBP10.45□□□□□ -0.74
CCDC130-208ENST00000588071 TMEM78Q5T7P6 136 aa10.45□□□□□ -0.74
CCDC130-208ENST00000588071 C9orf47Q6ZRZ4 202 aa10.45□□□□□ -0.74
CCDC130-208ENST00000588071 SGK494Q96LW2 274 aa10.45□□□□□ -0.74
CCDC130-208ENST00000588071 VGLL1Q99990 258 aa10.45□□□□□ -0.74
CCDC130-208ENST00000588071 AGPAT4-IT1Q9H0P7 198 aa10.45□□□□□ -0.74
CCDC130-208ENST00000588071 MED9Q9NWA0 146 aa10.45□□□□□ -0.74
CCDC130-208ENST00000588071 TRAV34A0A0B4J273 112 aa10.44□□□□□ -0.74
CCDC130-208ENST00000588071 LINC00862A6NCI5 91 aa10.44□□□□□ -0.74
CCDC130-208ENST00000588071 PRB2P02812 416 aaPredicted RBP10.44□□□□□ -0.74
CCDC130-208ENST00000588071 RPL35AP18077 110 aaKnown RBP10.44□□□□□ -0.74
CCDC130-208ENST00000588071 CEBPGP53567 150 aa10.44□□□□□ -0.74
CCDC130-208ENST00000588071 SRSF3P84103 164 aaKnown RBP10.44□□□□□ -0.74
CCDC130-208ENST00000588071 LINC00479Q96M42 142 aa10.44□□□□□ -0.74
CCDC130-208ENST00000588071 CITED4Q96RK1 184 aa10.44□□□□□ -0.74
CCDC130-208ENST00000588071 SMDT1Q9H4I9 107 aa10.44□□□□□ -0.74
CCDC130-208ENST00000588071 TREM1Q9NP99 234 aa10.44□□□□□ -0.74
CCDC130-208ENST00000588071 AURKAIP1Q9NWT8 199 aaPredicted RBP10.44□□□□□ -0.74
CCDC130-208ENST00000588071 TRAV8-1A0A0A6YYK1 113 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms