RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 TRAV5A0A0B4J249 113 aa9.81□□□□□ -0.84
ERCC1-205ENST00000587888 C7orf66A4D0T2 115 aa9.81□□□□□ -0.84
ERCC1-205ENST00000587888 MBPP02686 304 aaPredicted RBP9.81□□□□□ -0.84
ERCC1-205ENST00000587888 CT45A10P0DMU9 189 aa9.81□□□□□ -0.84
ERCC1-205ENST00000587888 OPCMLQ14982 345 aa9.81□□□□□ -0.84
ERCC1-205ENST00000587888 LINC00612Q8N6U2 182 aa9.81□□□□□ -0.84
ERCC1-205ENST00000587888 DNAJC4Q9NNZ3 241 aa9.81□□□□□ -0.84
ERCC1-205ENST00000587888 RCL1Q9Y2P8 373 aaKnown RBP9.81□□□□□ -0.84
ERCC1-205ENST00000587888 PXMP4Q9Y6I8 212 aa9.81□□□□□ -0.84
ERCC1-205ENST00000587888 CENPXA8MT69 81 aa9.8□□□□□ -0.84
ERCC1-205ENST00000587888 L7N2F9 121 aa9.8□□□□□ -0.84
ERCC1-205ENST00000587888 BCAP31P51572 246 aa9.8□□□□□ -0.84
ERCC1-205ENST00000587888 VAMP2P63027 116 aa9.8□□□□□ -0.84
ERCC1-205ENST00000587888 ZNF503Q96F45 646 aa9.8□□□□□ -0.84
ERCC1-205ENST00000587888 GGACTQ9BVM4 153 aa9.8□□□□□ -0.84
ERCC1-205ENST00000587888 Q9H3A6 140 aa9.8□□□□□ -0.84
ERCC1-205ENST00000587888 IGLC2P0DOY2 106 aa9.79□□□□□ -0.84
ERCC1-205ENST00000587888 LEPP41159 167 aa9.79□□□□□ -0.84
ERCC1-205ENST00000587888 CAMLGP49069 296 aa9.79□□□□□ -0.84
ERCC1-205ENST00000587888 KRTAP10-2P60368 255 aa9.79□□□□□ -0.84
ERCC1-205ENST00000587888 RAB31Q13636 194 aa9.79□□□□□ -0.84
ERCC1-205ENST00000587888 TTC32Q5I0X7 151 aa9.79□□□□□ -0.84
ERCC1-205ENST00000587888 MIC13Q5XKP0 118 aa9.79□□□□□ -0.84
ERCC1-205ENST00000587888 Q6ZRG5 221 aa9.79□□□□□ -0.84
ERCC1-205ENST00000587888 Q6ZTI0 123 aa9.79□□□□□ -0.84
ERCC1-205ENST00000587888 NRARPQ7Z6K4 114 aa9.79□□□□□ -0.84
ERCC1-205ENST00000587888 Q8N1X5 172 aa9.79□□□□□ -0.84
ERCC1-205ENST00000587888 ZNF431Q8TF32 576 aaPredicted RBP9.79□□□□□ -0.84
ERCC1-205ENST00000587888 SAT2Q96F10 170 aaPredicted RBP9.79□□□□□ -0.84
ERCC1-205ENST00000587888 TMPRSS5Q9H3S3 457 aa9.79□□□□□ -0.84
ERCC1-205ENST00000587888 SCRT2Q9NQ03 307 aa9.79□□□□□ -0.84
ERCC1-205ENST00000587888 ZNF586Q9NXT0 402 aa9.79□□□□□ -0.84
ERCC1-205ENST00000587888 LSM5Q9Y4Y9 91 aaKnown RBP9.79□□□□□ -0.84
ERCC1-205ENST00000587888 RYR1P21817 5038 aa9.79□□□□□ -0.84
ERCC1-205ENST00000587888 ABCA13Q86UQ4 5058 aa9.79□□□□□ -0.84
ERCC1-205ENST00000587888 FAM25EA8MYX2 175 aa9.78□□□□□ -0.84
ERCC1-205ENST00000587888 CCSO14618 274 aa9.78□□□□□ -0.84
ERCC1-205ENST00000587888 BTCP35070 178 aa9.78□□□□□ -0.84
ERCC1-205ENST00000587888 ERCC8Q13216 396 aa9.78□□□□□ -0.84
ERCC1-205ENST00000587888 MITD1Q8WV92 249 aa9.78□□□□□ -0.84
ERCC1-205ENST00000587888 MRPS16Q9Y3D3 137 aaKnown RBP9.78□□□□□ -0.84
ERCC1-205ENST00000587888 TRGV2A0A075B6R0 118 aa9.77□□□□□ -0.85
ERCC1-205ENST00000587888 FAM24AA6NFZ4 105 aa9.77□□□□□ -0.85
ERCC1-205ENST00000587888 NPIPB6E9PJ23 425 aa9.77□□□□□ -0.85
ERCC1-205ENST00000587888 H3BNG1 76 aa9.77□□□□□ -0.85
ERCC1-205ENST00000587888 CST7O76096 145 aa9.77□□□□□ -0.85
ERCC1-205ENST00000587888 CAV2P51636 162 aa9.77□□□□□ -0.85
ERCC1-205ENST00000587888 ZNF846Q147U1 533 aa9.77□□□□□ -0.85
ERCC1-205ENST00000587888 GUK1Q16774 197 aa9.77□□□□□ -0.85
ERCC1-205ENST00000587888 SDHCQ99643 169 aaPredicted RBP9.77□□□□□ -0.85
ERCC1-205ENST00000587888 PYGO2Q9BRQ0 406 aa9.77□□□□□ -0.85
ERCC1-205ENST00000587888 UPK3BQ9BT76 320 aa9.77□□□□□ -0.85
ERCC1-205ENST00000587888 GSN-AS1Q9NRJ2 163 aa9.77□□□□□ -0.85
ERCC1-205ENST00000587888 DYNC1H1Q14204 4646 aaKnown RBP9.77□□□□□ -0.85
ERCC1-205ENST00000587888 A0A1W2PPQ1 181 aa9.76□□□□□ -0.85
ERCC1-205ENST00000587888 RNASE4P34096 147 aaKnown RBP9.76□□□□□ -0.85
ERCC1-205ENST00000587888 DAZ2Q13117 558 aaKnown RBP9.76□□□□□ -0.85
ERCC1-205ENST00000587888 OR1L4Q8NGR5 311 aa9.76□□□□□ -0.85
ERCC1-205ENST00000587888 VSIG2Q96IQ7 327 aa9.76□□□□□ -0.85
ERCC1-205ENST00000587888 DNAH11Q96DT5 4516 aa9.76□□□□□ -0.85
ERCC1-205ENST00000587888 A0A096LPF7 62 aa9.75□□□□□ -0.85
ERCC1-205ENST00000587888 TRGV1A0A0A0MS02 117 aa9.75□□□□□ -0.85
ERCC1-205ENST00000587888 C5orf51A6NDU8 294 aa9.75□□□□□ -0.85
ERCC1-205ENST00000587888 SLC25A5P05141 298 aaKnown RBP9.75□□□□□ -0.85
ERCC1-205ENST00000587888 ODF3Q96PU9 254 aa9.75□□□□□ -0.85
ERCC1-205ENST00000587888 C20orf85Q9H1P6 137 aa9.75□□□□□ -0.85
ERCC1-205ENST00000587888 UQCC1Q9NVA1 299 aa9.75□□□□□ -0.85
ERCC1-205ENST00000587888 TRBV19A0A075B6N1 114 aa9.74□□□□□ -0.85
ERCC1-205ENST00000587888 C7orf71A4D174 169 aa9.74□□□□□ -0.85
ERCC1-205ENST00000587888 M0R3E3 92 aa9.74□□□□□ -0.85
ERCC1-205ENST00000587888 IL7P13232 177 aa9.74□□□□□ -0.85
ERCC1-205ENST00000587888 BTF3P20290 206 aaKnown RBP9.74□□□□□ -0.85
ERCC1-205ENST00000587888 CD300CQ08708 224 aa9.74□□□□□ -0.85
ERCC1-205ENST00000587888 C12orf45Q8N5I9 185 aaPredicted RBP9.74□□□□□ -0.85
ERCC1-205ENST00000587888 C11orf72Q8NBR9 251 aa9.74□□□□□ -0.85
ERCC1-205ENST00000587888 PFDN5Q99471 154 aa9.74□□□□□ -0.85
ERCC1-205ENST00000587888 AGPAT4-IT1Q9H0P7 198 aa9.74□□□□□ -0.85
ERCC1-205ENST00000587888 RBM38Q9H0Z9 239 aaKnown RBP9.74□□□□□ -0.85
ERCC1-205ENST00000587888 SLC39A9Q9NUM3 307 aa9.74□□□□□ -0.85
ERCC1-205ENST00000587888 FUT9Q9Y231 359 aa9.74□□□□□ -0.85
ERCC1-205ENST00000587888 WDR83OSQ9Y284 106 aa9.74□□□□□ -0.85
ERCC1-205ENST00000587888 KLF12Q9Y4X4 402 aa9.74□□□□□ -0.85
ERCC1-205ENST00000587888 TIMM9Q9Y5J7 89 aa9.74□□□□□ -0.85
ERCC1-205ENST00000587888 UBE2L5PA0A1B0GUS4 154 aa9.73□□□□□ -0.85
ERCC1-205ENST00000587888 ZNF324O75467 553 aaPredicted RBP9.73□□□□□ -0.85
ERCC1-205ENST00000587888 FUSP35637 526 aaKnown RBP eCLIP9.73□□□□□ -0.85
ERCC1-205ENST00000587888 RPL29P47914 159 aaKnown RBP9.73□□□□□ -0.85
ERCC1-205ENST00000587888 LINC00315P59091 139 aa9.73□□□□□ -0.85
ERCC1-205ENST00000587888 BAXQ07812 192 aa9.73□□□□□ -0.85
ERCC1-205ENST00000587888 BTN1A1Q13410 526 aa9.73□□□□□ -0.85
ERCC1-205ENST00000587888 CNPY1Q3B7I2 92 aa9.73□□□□□ -0.85
ERCC1-205ENST00000587888 EXOC3-AS1Q8N2X6 119 aa9.73□□□□□ -0.85
ERCC1-205ENST00000587888 ZNF680Q8NEM1 530 aa9.73□□□□□ -0.85
ERCC1-205ENST00000587888 BLNKQ8WV28 456 aa9.73□□□□□ -0.85
ERCC1-205ENST00000587888 LINC00477Q96M19 166 aa9.73□□□□□ -0.85
ERCC1-205ENST00000587888 SEC22CQ9BRL7 303 aa9.73□□□□□ -0.85
ERCC1-205ENST00000587888 TRAV6A0A075B6T7 132 aa9.72□□□□□ -0.85
ERCC1-205ENST00000587888 SIVA1O15304 175 aa9.72□□□□□ -0.85
ERCC1-205ENST00000587888 PLA2G10O15496 165 aa9.72□□□□□ -0.85
ERCC1-205ENST00000587888 ZNF253O75346 499 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms