RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 HELTA6NFD8 242 aa5.96□□□□□ -1.46
VMP1-204ENST00000587259 OR2T8A6NH00 312 aa5.96□□□□□ -1.46
VMP1-204ENST00000587259 G3V318 75 aa5.96□□□□□ -1.46
VMP1-204ENST00000587259 H7BYZ3 331 aa5.96□□□□□ -1.46
VMP1-204ENST00000587259 ZNF253O75346 499 aa5.96□□□□□ -1.46
VMP1-204ENST00000587259 EIF3GO75821 320 aaKnown RBP eCLIP5.96□□□□□ -1.46
VMP1-204ENST00000587259 GPR183P32249 361 aa5.96□□□□□ -1.46
VMP1-204ENST00000587259 BMI1P35226 326 aa5.96□□□□□ -1.46
VMP1-204ENST00000587259 TPPP2P59282 170 aa5.96□□□□□ -1.46
VMP1-204ENST00000587259 RPL23P62829 140 aaKnown RBP5.96□□□□□ -1.46
VMP1-204ENST00000587259 PSG9Q00887 426 aa5.96□□□□□ -1.46
VMP1-204ENST00000587259 CFHR3Q02985 330 aa5.96□□□□□ -1.46
VMP1-204ENST00000587259 C1orf194Q5T5A4 169 aa5.96□□□□□ -1.46
VMP1-204ENST00000587259 LINC01551Q86U37 167 aa5.96□□□□□ -1.46
VMP1-204ENST00000587259 CBLN2Q8IUK8 224 aa5.96□□□□□ -1.46
VMP1-204ENST00000587259 CMTM2Q8TAZ6 248 aa5.96□□□□□ -1.46
VMP1-204ENST00000587259 C4orf3Q8WVX3 66 aa5.96□□□□□ -1.46
VMP1-204ENST00000587259 IMMP2LQ96T52 175 aa5.96□□□□□ -1.46
VMP1-204ENST00000587259 ATG101Q9BSB4 218 aa5.96□□□□□ -1.46
VMP1-204ENST00000587259 AAMDCQ9H7C9 122 aa5.96□□□□□ -1.46
VMP1-204ENST00000587259 CSMD3Q7Z407 3707 aa5.96□□□□□ -1.46
VMP1-204ENST00000587259 STARD9Q9P2P6 4700 aa5.95□□□□□ -1.46
VMP1-204ENST00000587259 TRAV9-1A0A075B6T8 112 aa5.95□□□□□ -1.46
VMP1-204ENST00000587259 ZNF98A6NK75 572 aa5.95□□□□□ -1.46
VMP1-204ENST00000587259 GGTLC3B5MD39 225 aa5.95□□□□□ -1.46
VMP1-204ENST00000587259 PEX7O00628 323 aa5.95□□□□□ -1.46
VMP1-204ENST00000587259 CTSGP08311 255 aa5.95□□□□□ -1.46
VMP1-204ENST00000587259 PYYP10082 97 aa5.95□□□□□ -1.46
VMP1-204ENST00000587259 FOLR2P14207 255 aa5.95□□□□□ -1.46
VMP1-204ENST00000587259 PPIFP30405 207 aaKnown RBP5.95□□□□□ -1.46
VMP1-204ENST00000587259 RPL35P42766 123 aaKnown RBP5.95□□□□□ -1.46
VMP1-204ENST00000587259 CDX1P47902 265 aaPredicted RBP5.95□□□□□ -1.46
VMP1-204ENST00000587259 SLURP1P55000 103 aa5.95□□□□□ -1.46
VMP1-204ENST00000587259 UBE2G1P62253 170 aa5.95□□□□□ -1.46
VMP1-204ENST00000587259 SUMO1P63165 101 aaKnown RBP5.95□□□□□ -1.46
VMP1-204ENST00000587259 FOXE3Q13461 319 aa5.95□□□□□ -1.46
VMP1-204ENST00000587259 FHL3Q13643 280 aa5.95□□□□□ -1.46
VMP1-204ENST00000587259 KIAA0141Q14154 515 aaPredicted RBP5.95□□□□□ -1.46
VMP1-204ENST00000587259 ZNF343Q6P1L6 599 aa5.95□□□□□ -1.46
VMP1-204ENST00000587259 C2CD4CQ8TF44 421 aa5.95□□□□□ -1.46
VMP1-204ENST00000587259 FMC1Q96HJ9 113 aa5.95□□□□□ -1.46
VMP1-204ENST00000587259 METTL26Q96S19 204 aa5.95□□□□□ -1.46
VMP1-204ENST00000587259 LYSTQ99698 3801 aa5.95□□□□□ -1.46
VMP1-204ENST00000587259 CHRDL1Q9BU40 450 aa5.95□□□□□ -1.46
VMP1-204ENST00000587259 ELOVL1Q9BW60 279 aa5.95□□□□□ -1.46
VMP1-204ENST00000587259 CLEC5AQ9NY25 188 aa5.95□□□□□ -1.46
VMP1-204ENST00000587259 TMA7Q9Y2S6 64 aaKnown RBP5.95□□□□□ -1.46
VMP1-204ENST00000587259 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.94□□□□□ -1.46
VMP1-204ENST00000587259 TRAV5A0A0B4J249 113 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 NDUFA4O00483 81 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 SAP30O75446 220 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 IGLV1-40P01703 118 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 IGHG4P01861 327 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 SLC25A5P05141 298 aaKnown RBP5.94□□□□□ -1.46
VMP1-204ENST00000587259 CLEC3BP05452 202 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 ELANEP08246 267 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 IGLC2P0DOY2 106 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 ATF4P18848 351 aaPredicted RBP5.94□□□□□ -1.46
VMP1-204ENST00000587259 CRYBB3P26998 211 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 PSMB8P28062 276 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 GALR1P47211 349 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 CSN1S1P47710 185 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 USF2Q15853 346 aaPredicted RBP5.94□□□□□ -1.46
VMP1-204ENST00000587259 TMEM183BQ1AE95 376 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 CENPWQ5EE01 88 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 SAMD13Q5VXD3 122 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 MORN5Q5VZ52 161 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 OR8I2Q8N0Y5 310 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 OR1N2Q8NGR9 330 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 DLX4Q92988 240 aaPredicted RBP5.94□□□□□ -1.46
VMP1-204ENST00000587259 ISOC2Q96AB3 205 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 SFRP2Q96HF1 295 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 GRAMD2BQ96HH9 432 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 CCDC140Q96MF4 163 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 Q9H3A6 140 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 ZMAT5Q9UDW3 170 aaKnown RBP5.94□□□□□ -1.46
VMP1-204ENST00000587259 MLXQ9UH92 298 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 EPDR1Q9UM22 224 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 SORL1Q92673 2214 aa5.94□□□□□ -1.46
VMP1-204ENST00000587259 TRBV19A0A075B6N1 114 aa5.93□□□□□ -1.46
VMP1-204ENST00000587259 TRBV24-1A0A075B6N3 115 aa5.93□□□□□ -1.46
VMP1-204ENST00000587259 A0A087X0K7 114 aa5.93□□□□□ -1.46
VMP1-204ENST00000587259 TRBV6-1A0A0K0K1D8 114 aa5.93□□□□□ -1.46
VMP1-204ENST00000587259 A0A1W2PS18 150 aa5.93□□□□□ -1.46
VMP1-204ENST00000587259 C1orf196B1AJZ1 125 aa5.93□□□□□ -1.46
VMP1-204ENST00000587259 NPPCP23582 126 aa5.93□□□□□ -1.46
VMP1-204ENST00000587259 ADMP35318 185 aa5.93□□□□□ -1.46
VMP1-204ENST00000587259 ARL3P36405 182 aa5.93□□□□□ -1.46
VMP1-204ENST00000587259 RAB5BP61020 215 aa5.93□□□□□ -1.46
VMP1-204ENST00000587259 RANP62826 216 aaKnown RBP5.93□□□□□ -1.46
VMP1-204ENST00000587259 FLI1Q01543 452 aaPredicted RBP5.93□□□□□ -1.46
VMP1-204ENST00000587259 CLEC19AQ6UXS0 136 aa5.93□□□□□ -1.46
VMP1-204ENST00000587259 RNF152Q8N8N0 203 aa5.93□□□□□ -1.46
VMP1-204ENST00000587259 BLNKQ8WV28 456 aa5.93□□□□□ -1.46
VMP1-204ENST00000587259 MS4A10Q96PG2 267 aa5.93□□□□□ -1.46
VMP1-204ENST00000587259 KRTAP4-12Q9BQ66 201 aa5.93□□□□□ -1.46
VMP1-204ENST00000587259 SLC50A1Q9BRV3 221 aa5.93□□□□□ -1.46
VMP1-204ENST00000587259 DERL1Q9BUN8 251 aa5.93□□□□□ -1.46
VMP1-204ENST00000587259 DNAH1Q9P2D7 4330 aa5.93□□□□□ -1.46
VMP1-204ENST00000587259 IGHV4OR15-8A0A075B7B6 117 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms