RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 MAPKAPK5-AS1Q8N8E1 139 aa13.44□□□□□ -0.26
TRAF4-216ENST00000586813 RXFP4Q8TDU9 374 aa13.44□□□□□ -0.26
TRAF4-216ENST00000586813 MITD1Q8WV92 249 aa13.44□□□□□ -0.26
TRAF4-216ENST00000586813 KRTAP1-5Q9BYS1 174 aa13.44□□□□□ -0.26
TRAF4-216ENST00000586813 RBM38Q9H0Z9 239 aaKnown RBP13.44□□□□□ -0.26
TRAF4-216ENST00000586813 PXMP4Q9Y6I8 212 aa13.44□□□□□ -0.26
TRAF4-216ENST00000586813 A0A0J9YY99 117 aa13.43□□□□□ -0.26
TRAF4-216ENST00000586813 GAGE12BA1L429 117 aa13.43□□□□□ -0.26
TRAF4-216ENST00000586813 GAGE7O76087 117 aa13.43□□□□□ -0.26
TRAF4-216ENST00000586813 MBPP02686 304 aaPredicted RBP13.43□□□□□ -0.26
TRAF4-216ENST00000586813 RLN2P04090 185 aa13.43□□□□□ -0.26
TRAF4-216ENST00000586813 GAGE12FP0CL80 117 aa13.43□□□□□ -0.26
TRAF4-216ENST00000586813 GAGE12GP0CL81 117 aa13.43□□□□□ -0.26
TRAF4-216ENST00000586813 GAGE12IP0CL82 117 aa13.43□□□□□ -0.26
TRAF4-216ENST00000586813 CENPXA8MT69 81 aa13.42□□□□□ -0.26
TRAF4-216ENST00000586813 SNURFLB1AK76 121 aa13.42□□□□□ -0.26
TRAF4-216ENST00000586813 H3BQ15 152 aa13.42□□□□□ -0.26
TRAF4-216ENST00000586813 SPATA12Q7Z6I5 190 aa13.42□□□□□ -0.26
TRAF4-216ENST00000586813 SAT2Q96F10 170 aaPredicted RBP13.42□□□□□ -0.26
TRAF4-216ENST00000586813 ODF3Q96PU9 254 aa13.42□□□□□ -0.26
TRAF4-216ENST00000586813 SDHCQ99643 169 aaPredicted RBP13.42□□□□□ -0.26
TRAF4-216ENST00000586813 UPK3BQ9BT76 320 aa13.42□□□□□ -0.26
TRAF4-216ENST00000586813 Q9H3A6 140 aa13.42□□□□□ -0.26
TRAF4-216ENST00000586813 H3BNG1 76 aa13.41□□□□□ -0.26
TRAF4-216ENST00000586813 J3KRW8 73 aa13.41□□□□□ -0.26
TRAF4-216ENST00000586813 CT45A10P0DMU9 189 aa13.41□□□□□ -0.26
TRAF4-216ENST00000586813 CAMLGP49069 296 aa13.41□□□□□ -0.26
TRAF4-216ENST00000586813 TRAV12-3A0A0B4J271 114 aa13.4□□□□□ -0.26
TRAF4-216ENST00000586813 NPIPB6E9PJ23 425 aa13.4□□□□□ -0.26
TRAF4-216ENST00000586813 CCSO14618 274 aa13.4□□□□□ -0.26
TRAF4-216ENST00000586813 LEPP41159 167 aa13.4□□□□□ -0.26
TRAF4-216ENST00000586813 GUK1Q16774 197 aa13.4□□□□□ -0.26
TRAF4-216ENST00000586813 ESRGQ1W209 222 aa13.4□□□□□ -0.26
TRAF4-216ENST00000586813 NRARPQ7Z6K4 114 aa13.4□□□□□ -0.26
TRAF4-216ENST00000586813 TMPRSS5Q9H3S3 457 aa13.4□□□□□ -0.26
TRAF4-216ENST00000586813 DNAJC4Q9NNZ3 241 aa13.4□□□□□ -0.26
TRAF4-216ENST00000586813 L7N2F9 121 aa13.39□□□□□ -0.27
TRAF4-216ENST00000586813 VAMP2P63027 116 aa13.39□□□□□ -0.27
TRAF4-216ENST00000586813 RAB31Q13636 194 aa13.39□□□□□ -0.27
TRAF4-216ENST00000586813 MIC13Q5XKP0 118 aa13.39□□□□□ -0.27
TRAF4-216ENST00000586813 Q6ZRG5 221 aa13.39□□□□□ -0.27
TRAF4-216ENST00000586813 ZNF431Q8TF32 576 aaPredicted RBP13.39□□□□□ -0.27
TRAF4-216ENST00000586813 PYGO2Q9BRQ0 406 aa13.39□□□□□ -0.27
TRAF4-216ENST00000586813 MRPS16Q9Y3D3 137 aaKnown RBP13.39□□□□□ -0.27
TRAF4-216ENST00000586813 DNAH5Q8TE73 4624 aa13.38□□□□□ -0.27
TRAF4-216ENST00000586813 TRAV5A0A0B4J249 113 aa13.38□□□□□ -0.27
TRAF4-216ENST00000586813 A0A1W2PPQ1 181 aa13.38□□□□□ -0.27
TRAF4-216ENST00000586813 IL7P13232 177 aa13.38□□□□□ -0.27
TRAF4-216ENST00000586813 DAZ2Q13117 558 aaKnown RBP13.38□□□□□ -0.27
TRAF4-216ENST00000586813 ZNF846Q147U1 533 aa13.38□□□□□ -0.27
TRAF4-216ENST00000586813 Q6ZTI0 123 aa13.38□□□□□ -0.27
TRAF4-216ENST00000586813 OR1L4Q8NGR5 311 aa13.38□□□□□ -0.27
TRAF4-216ENST00000586813 C20orf85Q9H1P6 137 aa13.38□□□□□ -0.27
TRAF4-216ENST00000586813 LSM5Q9Y4Y9 91 aaKnown RBP13.38□□□□□ -0.27
TRAF4-216ENST00000586813 CST7O76096 145 aa13.37□□□□□ -0.27
TRAF4-216ENST00000586813 BCAP31P51572 246 aa13.37□□□□□ -0.27
TRAF4-216ENST00000586813 CAV2P51636 162 aa13.37□□□□□ -0.27
TRAF4-216ENST00000586813 CNPY1Q3B7I2 92 aa13.37□□□□□ -0.27
TRAF4-216ENST00000586813 UQCC1Q9NVA1 299 aa13.37□□□□□ -0.27
TRAF4-216ENST00000586813 ZNF586Q9NXT0 402 aa13.37□□□□□ -0.27
TRAF4-216ENST00000586813 WDR83OSQ9Y284 106 aa13.37□□□□□ -0.27
TRAF4-216ENST00000586813 ZNF253O75346 499 aa13.36□□□□□ -0.27
TRAF4-216ENST00000586813 Q8N1X5 172 aa13.36□□□□□ -0.27
TRAF4-216ENST00000586813 MRPL53Q96EL3 112 aaKnown RBP13.36□□□□□ -0.27
TRAF4-216ENST00000586813 PFDN5Q99471 154 aa13.36□□□□□ -0.27
TRAF4-216ENST00000586813 C11orf1Q9H5F2 150 aa13.36□□□□□ -0.27
TRAF4-216ENST00000586813 UBE2L5PA0A1B0GUS4 154 aa13.35□□□□□ -0.27
TRAF4-216ENST00000586813 FAM25EA8MYX2 175 aa13.35□□□□□ -0.27
TRAF4-216ENST00000586813 SLC25A5P05141 298 aaKnown RBP13.35□□□□□ -0.27
TRAF4-216ENST00000586813 BTF3P20290 206 aaKnown RBP13.35□□□□□ -0.27
TRAF4-216ENST00000586813 VWC2Q2TAL6 325 aa13.35□□□□□ -0.27
TRAF4-216ENST00000586813 C11orf72Q8NBR9 251 aa13.35□□□□□ -0.27
TRAF4-216ENST00000586813 ZNF680Q8NEM1 530 aa13.35□□□□□ -0.27
TRAF4-216ENST00000586813 TRBV19A0A075B6N1 114 aa13.34□□□□□ -0.27
TRAF4-216ENST00000586813 TRGV2A0A075B6R0 118 aa13.34□□□□□ -0.27
TRAF4-216ENST00000586813 C7orf71A4D174 169 aa13.34□□□□□ -0.27
TRAF4-216ENST00000586813 FAM24AA6NFZ4 105 aa13.34□□□□□ -0.27
TRAF4-216ENST00000586813 M0R3E3 92 aa13.34□□□□□ -0.27
TRAF4-216ENST00000586813 KRTAP10-2P60368 255 aa13.34□□□□□ -0.27
TRAF4-216ENST00000586813 VSIG2Q96IQ7 327 aa13.34□□□□□ -0.27
TRAF4-216ENST00000586813 C18orf15Q96N68 181 aa13.34□□□□□ -0.27
TRAF4-216ENST00000586813 GSN-AS1Q9NRJ2 163 aa13.34□□□□□ -0.27
TRAF4-216ENST00000586813 SLC39A9Q9NUM3 307 aa13.34□□□□□ -0.27
TRAF4-216ENST00000586813 A0A096LPF7 62 aa13.33□□□□□ -0.28
TRAF4-216ENST00000586813 KLLNB2CW77 178 aa13.33□□□□□ -0.28
TRAF4-216ENST00000586813 RPL29P47914 159 aaKnown RBP13.33□□□□□ -0.28
TRAF4-216ENST00000586813 BAXQ07812 192 aa13.33□□□□□ -0.28
TRAF4-216ENST00000586813 ERCC8Q13216 396 aa13.33□□□□□ -0.28
TRAF4-216ENST00000586813 C5orf51A6NDU8 294 aa13.32□□□□□ -0.28
TRAF4-216ENST00000586813 PLA2G10O15496 165 aa13.32□□□□□ -0.28
TRAF4-216ENST00000586813 BTN1A1Q13410 526 aa13.32□□□□□ -0.28
TRAF4-216ENST00000586813 C12orf45Q8N5I9 185 aaPredicted RBP13.32□□□□□ -0.28
TRAF4-216ENST00000586813 FAM19A4Q96LR4 140 aa13.32□□□□□ -0.28
TRAF4-216ENST00000586813 LINC00467Q9BRT7 94 aa13.32□□□□□ -0.28
TRAF4-216ENST00000586813 SCRT2Q9NQ03 307 aa13.32□□□□□ -0.28
TRAF4-216ENST00000586813 TMEM14CQ9P0S9 112 aa13.32□□□□□ -0.28
TRAF4-216ENST00000586813 TRGV1A0A0A0MS02 117 aa13.31□□□□□ -0.28
TRAF4-216ENST00000586813 LYRM1O43325 122 aa13.31□□□□□ -0.28
TRAF4-216ENST00000586813 ZNF324O75467 553 aaPredicted RBP13.31□□□□□ -0.28
TRAF4-216ENST00000586813 NDUFB4O95168 129 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms