RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 PMS2P11Q13670 270 aa11.97□□□□□ -0.49
ATG4D-205ENST00000586477 PSG3Q16557 428 aa11.97□□□□□ -0.49
ATG4D-205ENST00000586477 PSMG4Q5JS54 123 aa11.97□□□□□ -0.49
ATG4D-205ENST00000586477 CMTM2Q8TAZ6 248 aa11.97□□□□□ -0.49
ATG4D-205ENST00000586477 C17orf77Q96MU5 243 aa11.97□□□□□ -0.49
ATG4D-205ENST00000586477 TXNDC17Q9BRA2 123 aa11.97□□□□□ -0.49
ATG4D-205ENST00000586477 Q9H3A6 140 aa11.97□□□□□ -0.49
ATG4D-205ENST00000586477 MAP6D1Q9H9H5 199 aa11.97□□□□□ -0.49
ATG4D-205ENST00000586477 CSMD3Q7Z407 3707 aa11.97□□□□□ -0.49
ATG4D-205ENST00000586477 A8MZ25 164 aa11.96□□□□□ -0.49
ATG4D-205ENST00000586477 SLC17A3O00476 420 aa11.96□□□□□ -0.49
ATG4D-205ENST00000586477 EIF3GO75821 320 aaKnown RBP eCLIP11.96□□□□□ -0.49
ATG4D-205ENST00000586477 NDUFB4O95168 129 aa11.96□□□□□ -0.49
ATG4D-205ENST00000586477 EBLN2Q6P2I7 272 aa11.96□□□□□ -0.49
ATG4D-205ENST00000586477 ZNF738Q8NE65 137 aa11.96□□□□□ -0.49
ATG4D-205ENST00000586477 TRAV8-2A0A0B4J237 113 aa11.95□□□□□ -0.5
ATG4D-205ENST00000586477 SERTM2A0A1B0GWG4 89 aa11.95□□□□□ -0.5
ATG4D-205ENST00000586477 H3BTX0 84 aa11.95□□□□□ -0.5
ATG4D-205ENST00000586477 SNRPCP09234 159 aaKnown RBP11.95□□□□□ -0.5
ATG4D-205ENST00000586477 DEFB131AP59861 70 aa11.95□□□□□ -0.5
ATG4D-205ENST00000586477 ICAM4Q14773 271 aa11.95□□□□□ -0.5
ATG4D-205ENST00000586477 ODF3L2Q3SX64 289 aa11.95□□□□□ -0.5
ATG4D-205ENST00000586477 FOXI2Q6ZQN5 318 aa11.95□□□□□ -0.5
ATG4D-205ENST00000586477 C5orf17Q8NAS9 161 aa11.95□□□□□ -0.5
ATG4D-205ENST00000586477 LYPD6BQ8NI32 183 aa11.95□□□□□ -0.5
ATG4D-205ENST00000586477 A0A1B0GV50 99 aa11.94□□□□□ -0.5
ATG4D-205ENST00000586477 F6UZH7 168 aa11.94□□□□□ -0.5
ATG4D-205ENST00000586477 K7EQM0 130 aa11.94□□□□□ -0.5
ATG4D-205ENST00000586477 CD7P09564 240 aa11.94□□□□□ -0.5
ATG4D-205ENST00000586477 RPUSD4Q96CM3 377 aaKnown RBP11.94□□□□□ -0.5
ATG4D-205ENST00000586477 TMPRSS5Q9H3S3 457 aa11.94□□□□□ -0.5
ATG4D-205ENST00000586477 GNG13Q9P2W3 67 aa11.94□□□□□ -0.5
ATG4D-205ENST00000586477 PGPA6NDG6 321 aa11.93□□□□□ -0.5
ATG4D-205ENST00000586477 FAM74A7A6NL05 159 aa11.93□□□□□ -0.5
ATG4D-205ENST00000586477 DUSP14O95147 198 aaKnown RBP11.93□□□□□ -0.5
ATG4D-205ENST00000586477 CST9LP1Q5W188 147 aa11.93□□□□□ -0.5
ATG4D-205ENST00000586477 EXOC3-AS1Q8N2X6 119 aa11.93□□□□□ -0.5
ATG4D-205ENST00000586477 FAM24BQ8N5W8 94 aa11.93□□□□□ -0.5
ATG4D-205ENST00000586477 RNF182Q8N6D2 247 aa11.93□□□□□ -0.5
ATG4D-205ENST00000586477 OR10J6PQ8NGY7 276 aa11.93□□□□□ -0.5
ATG4D-205ENST00000586477 TM2D3Q9BRN9 247 aa11.93□□□□□ -0.5
ATG4D-205ENST00000586477 FBLL1A6NHQ2 334 aaKnown RBP11.92□□□□□ -0.5
ATG4D-205ENST00000586477 SLC25A5P05141 298 aaKnown RBP11.92□□□□□ -0.5
ATG4D-205ENST00000586477 NMBP08949 121 aa11.92□□□□□ -0.5
ATG4D-205ENST00000586477 UBE2G2P60604 165 aa11.92□□□□□ -0.5
ATG4D-205ENST00000586477 STHQ8IWL8 128 aa11.92□□□□□ -0.5
ATG4D-205ENST00000586477 HIST1H2BAQ96A08 127 aa11.92□□□□□ -0.5
ATG4D-205ENST00000586477 RCHY1Q96PM5 261 aa11.92□□□□□ -0.5
ATG4D-205ENST00000586477 SAV1Q9H4B6 383 aaPredicted RBP11.92□□□□□ -0.5
ATG4D-205ENST00000586477 TUBA4BQ9H853 241 aa11.92□□□□□ -0.5
ATG4D-205ENST00000586477 SACSQ9NZJ4 4579 aa11.92□□□□□ -0.5
ATG4D-205ENST00000586477 LYSTQ99698 3801 aa11.92□□□□□ -0.5
ATG4D-205ENST00000586477 RBAKDNA6NC62 111 aa11.91□□□□□ -0.5
ATG4D-205ENST00000586477 C3orf84H3BNL1 204 aa11.91□□□□□ -0.5
ATG4D-205ENST00000586477 PAGE4O60829 102 aa11.91□□□□□ -0.5
ATG4D-205ENST00000586477 BCL2P10415 239 aa11.91□□□□□ -0.5
ATG4D-205ENST00000586477 SUMO1P63165 101 aaKnown RBP11.91□□□□□ -0.5
ATG4D-205ENST00000586477 IGFL4Q6B9Z1 124 aa11.91□□□□□ -0.5
ATG4D-205ENST00000586477 C20orf173Q96LM9 149 aa11.91□□□□□ -0.5
ATG4D-205ENST00000586477 VAX2Q9UIW0 290 aa11.91□□□□□ -0.5
ATG4D-205ENST00000586477 GGTLC3B5MD39 225 aa11.9□□□□□ -0.5
ATG4D-205ENST00000586477 RGS13O14921 159 aa11.9□□□□□ -0.5
ATG4D-205ENST00000586477 HLA-DRB4P13762 266 aa11.9□□□□□ -0.5
ATG4D-205ENST00000586477 NUTF2P61970 127 aaKnown RBP11.9□□□□□ -0.5
ATG4D-205ENST00000586477 IFITM2Q01629 132 aa11.9□□□□□ -0.5
ATG4D-205ENST00000586477 CLLU1Q5K131 121 aa11.9□□□□□ -0.5
ATG4D-205ENST00000586477 LINC00322Q6ZN03 302 aaPredicted RBP11.9□□□□□ -0.5
ATG4D-205ENST00000586477 OR8A1Q8NGG7 326 aa11.9□□□□□ -0.5
ATG4D-205ENST00000586477 CLUHP3Q96NS8 147 aa11.9□□□□□ -0.5
ATG4D-205ENST00000586477 ATG101Q9BSB4 218 aa11.9□□□□□ -0.5
ATG4D-205ENST00000586477 WFDC10AQ9H1F0 79 aa11.9□□□□□ -0.5
ATG4D-205ENST00000586477 YTHDF2Q9Y5A9 579 aaKnown RBP11.9□□□□□ -0.5
ATG4D-205ENST00000586477 HLA-DRB4X5D2U9 266 aa11.9□□□□□ -0.5
ATG4D-205ENST00000586477 A0A0J9YX75 114 aa11.89□□□□□ -0.51
ATG4D-205ENST00000586477 C11orf94C9JXX5 98 aa11.89□□□□□ -0.51
ATG4D-205ENST00000586477 M0R3E3 92 aa11.89□□□□□ -0.51
ATG4D-205ENST00000586477 PDE6DO43924 150 aa11.89□□□□□ -0.51
ATG4D-205ENST00000586477 CCL20P78556 96 aa11.89□□□□□ -0.51
ATG4D-205ENST00000586477 MEF2BQ02080 365 aaPredicted RBP11.89□□□□□ -0.51
ATG4D-205ENST00000586477 HAGHQ16775 308 aa11.89□□□□□ -0.51
ATG4D-205ENST00000586477 ACTL10Q5JWF8 245 aa11.89□□□□□ -0.51
ATG4D-205ENST00000586477 APRG1Q8IVJ8 170 aa11.89□□□□□ -0.51
ATG4D-205ENST00000586477 ZMAT4Q9H898 229 aa11.89□□□□□ -0.51
ATG4D-205ENST00000586477 SRD5A3Q9H8P0 318 aa11.89□□□□□ -0.51
ATG4D-205ENST00000586477 EPDR1Q9UM22 224 aa11.89□□□□□ -0.51
ATG4D-205ENST00000586477 RYR2Q92736 4967 aa11.88□□□□□ -0.51
ATG4D-205ENST00000586477 DIRC3C9JPN6 131 aa11.88□□□□□ -0.51
ATG4D-205ENST00000586477 NDUFS6O75380 124 aaKnown RBP11.88□□□□□ -0.51
ATG4D-205ENST00000586477 TCRAP04437 139 aa11.88□□□□□ -0.51
ATG4D-205ENST00000586477 HLA-DMBP28068 263 aa11.88□□□□□ -0.51
ATG4D-205ENST00000586477 HIST1H1AQ02539 215 aaPredicted RBP11.88□□□□□ -0.51
ATG4D-205ENST00000586477 TMEM78Q5T7P6 136 aa11.88□□□□□ -0.51
ATG4D-205ENST00000586477 MORN3Q6PF18 240 aaPredicted RBP11.88□□□□□ -0.51
ATG4D-205ENST00000586477 DEFB125Q8N687 156 aa11.88□□□□□ -0.51
ATG4D-205ENST00000586477 CYB561D1Q8N8Q1 229 aa11.88□□□□□ -0.51
ATG4D-205ENST00000586477 LINC00477Q96M19 166 aa11.88□□□□□ -0.51
ATG4D-205ENST00000586477 SMDT1Q9H4I9 107 aa11.88□□□□□ -0.51
ATG4D-205ENST00000586477 PPP1R14DQ9NXH3 145 aa11.88□□□□□ -0.51
ATG4D-205ENST00000586477 LOC102724200A0A096LPH7 203 aaPredicted RBP11.87□□□□□ -0.51
ATG4D-205ENST00000586477 RBFOX3A6NFN3 312 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms