RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 C11orf94C9JXX5 98 aa13.6□□□□□ -0.23
ATG4D-203ENST00000585752 H3BQ15 152 aa13.6□□□□□ -0.23
ATG4D-203ENST00000585752 ZNF253O75346 499 aa13.6□□□□□ -0.23
ATG4D-203ENST00000585752 CDC34P49427 236 aaPredicted RBP13.6□□□□□ -0.23
ATG4D-203ENST00000585752 EIF5AP63241 154 aaKnown RBP13.6□□□□□ -0.23
ATG4D-203ENST00000585752 UBE2L3P68036 154 aaKnown RBP13.6□□□□□ -0.23
ATG4D-203ENST00000585752 PDE6HQ13956 83 aa13.6□□□□□ -0.23
ATG4D-203ENST00000585752 PPP1R14DQ9NXH3 145 aa13.6□□□□□ -0.23
ATG4D-203ENST00000585752 ZNF586Q9NXT0 402 aa13.6□□□□□ -0.23
ATG4D-203ENST00000585752 ALMS1Q8TCU4 4167 aa13.6□□□□□ -0.23
ATG4D-203ENST00000585752 TRBV19A0A075B6N1 114 aa13.59□□□□□ -0.23
ATG4D-203ENST00000585752 IGHV4-28A0A0C4DH34 117 aa13.59□□□□□ -0.23
ATG4D-203ENST00000585752 A0A0J9YX75 114 aa13.59□□□□□ -0.23
ATG4D-203ENST00000585752 F6UB75 175 aa13.59□□□□□ -0.23
ATG4D-203ENST00000585752 SLC17A3O00476 420 aa13.59□□□□□ -0.23
ATG4D-203ENST00000585752 BCL2L11O43521 198 aa13.59□□□□□ -0.23
ATG4D-203ENST00000585752 OR10J4P0C629 311 aa13.59□□□□□ -0.23
ATG4D-203ENST00000585752 C4BPBP20851 252 aa13.59□□□□□ -0.23
ATG4D-203ENST00000585752 DEFB1P60022 68 aa13.59□□□□□ -0.23
ATG4D-203ENST00000585752 AKR1C8PQ5T2L2 129 aa13.59□□□□□ -0.23
ATG4D-203ENST00000585752 GDF5OSQ5U4N7 250 aa13.59□□□□□ -0.23
ATG4D-203ENST00000585752 RNF141Q8WVD5 230 aa13.59□□□□□ -0.23
ATG4D-203ENST00000585752 RPUSD4Q96CM3 377 aaKnown RBP13.59□□□□□ -0.23
ATG4D-203ENST00000585752 ZNF471Q9BX82 626 aaPredicted RBP13.59□□□□□ -0.23
ATG4D-203ENST00000585752 DNAH1Q9P2D7 4330 aa13.58□□□□□ -0.24
ATG4D-203ENST00000585752 NBEAP1P0C6P0 100 aa13.58□□□□□ -0.24
ATG4D-203ENST00000585752 HLA-DMBP28068 263 aa13.58□□□□□ -0.24
ATG4D-203ENST00000585752 TCTAP57738 103 aa13.58□□□□□ -0.24
ATG4D-203ENST00000585752 HIST1H1AQ02539 215 aaPredicted RBP13.58□□□□□ -0.24
ATG4D-203ENST00000585752 PQLC2Q6ZP29 291 aa13.58□□□□□ -0.24
ATG4D-203ENST00000585752 FAM167A-AS1Q96KT0 104 aa13.58□□□□□ -0.24
ATG4D-203ENST00000585752 ACTR3CQ9C0K3 210 aaPredicted RBP13.58□□□□□ -0.24
ATG4D-203ENST00000585752 XCL2Q9UBD3 114 aa13.58□□□□□ -0.24
ATG4D-203ENST00000585752 C1QBP02746 253 aa13.57□□□□□ -0.24
ATG4D-203ENST00000585752 TMUB2Q71RG4 321 aa13.57□□□□□ -0.24
ATG4D-203ENST00000585752 Q8NAQ8 132 aa13.57□□□□□ -0.24
ATG4D-203ENST00000585752 OR10J6PQ8NGY7 276 aa13.57□□□□□ -0.24
ATG4D-203ENST00000585752 SAT2Q96F10 170 aaPredicted RBP13.57□□□□□ -0.24
ATG4D-203ENST00000585752 HYLS1Q96M11 299 aa13.57□□□□□ -0.24
ATG4D-203ENST00000585752 PRELID1Q9Y255 219 aa13.57□□□□□ -0.24
ATG4D-203ENST00000585752 PLECQ15149 4684 aaKnown RBP13.57□□□□□ -0.24
ATG4D-203ENST00000585752 ZNF705EA8MWA4 302 aaPredicted RBP13.56□□□□□ -0.24
ATG4D-203ENST00000585752 IGLL5B9A064 214 aa13.56□□□□□ -0.24
ATG4D-203ENST00000585752 GIG44P09565 113 aaPredicted RBP13.56□□□□□ -0.24
ATG4D-203ENST00000585752 LGALS9CQ6DKI2 356 aa13.56□□□□□ -0.24
ATG4D-203ENST00000585752 OR8A1Q8NGG7 326 aa13.56□□□□□ -0.24
ATG4D-203ENST00000585752 CYTL1Q9NRR1 136 aa13.56□□□□□ -0.24
ATG4D-203ENST00000585752 HMGB3O15347 200 aaKnown RBP13.55□□□□□ -0.24
ATG4D-203ENST00000585752 CNN1P51911 297 aaKnown RBP13.55□□□□□ -0.24
ATG4D-203ENST00000585752 FXYD7P58549 80 aa13.55□□□□□ -0.24
ATG4D-203ENST00000585752 IQCF2Q8IXL9 164 aa13.55□□□□□ -0.24
ATG4D-203ENST00000585752 FXYD5Q96DB9 178 aa13.55□□□□□ -0.24
ATG4D-203ENST00000585752 CLUHP3Q96NS8 147 aa13.55□□□□□ -0.24
ATG4D-203ENST00000585752 ZNF705FA8MVS1 300 aaPredicted RBP13.54□□□□□ -0.24
ATG4D-203ENST00000585752 ZNF705DP0CH99 300 aaPredicted RBP13.54□□□□□ -0.24
ATG4D-203ENST00000585752 ZNF705BP0CI00 300 aaPredicted RBP13.54□□□□□ -0.24
ATG4D-203ENST00000585752 RBMY1A1P0DJD3 496 aaKnown RBP13.54□□□□□ -0.24
ATG4D-203ENST00000585752 RBMY1CP0DJD4 496 aa13.54□□□□□ -0.24
ATG4D-203ENST00000585752 CSN1S1P47710 185 aa13.54□□□□□ -0.24
ATG4D-203ENST00000585752 RBMY1FQ15415 496 aaKnown RBP13.54□□□□□ -0.24
ATG4D-203ENST00000585752 ZFP69Q49AA0 526 aa13.54□□□□□ -0.24
ATG4D-203ENST00000585752 FAM74A1Q5RGS3 127 aa13.54□□□□□ -0.24
ATG4D-203ENST00000585752 RPP25LQ8N5L8 163 aaKnown RBP13.54□□□□□ -0.24
ATG4D-203ENST00000585752 RAB24Q969Q5 203 aa13.54□□□□□ -0.24
ATG4D-203ENST00000585752 MRPL53Q96EL3 112 aaKnown RBP13.54□□□□□ -0.24
ATG4D-203ENST00000585752 X6R8D5 127 aa13.54□□□□□ -0.24
ATG4D-203ENST00000585752 IGHV3OR16-12A0A075B7B8 117 aa13.53□□□□□ -0.24
ATG4D-203ENST00000585752 TRAV10A0A0B4J240 114 aa13.53□□□□□ -0.24
ATG4D-203ENST00000585752 A0A1B0GVG6 124 aa13.53□□□□□ -0.24
ATG4D-203ENST00000585752 EIF3GO75821 320 aaKnown RBP eCLIP13.53□□□□□ -0.24
ATG4D-203ENST00000585752 AMBPP02760 352 aa13.53□□□□□ -0.24
ATG4D-203ENST00000585752 ARL14EPLP0DKL9 152 aa13.53□□□□□ -0.24
ATG4D-203ENST00000585752 TPT1P13693 172 aaKnown RBP13.53□□□□□ -0.24
ATG4D-203ENST00000585752 RANP62826 216 aaKnown RBP13.53□□□□□ -0.24
ATG4D-203ENST00000585752 ICAM4Q14773 271 aa13.53□□□□□ -0.24
ATG4D-203ENST00000585752 EXOC3-AS1Q8N2X6 119 aa13.53□□□□□ -0.24
ATG4D-203ENST00000585752 CSNK1G2-AS1Q8NCQ2 148 aa13.53□□□□□ -0.24
ATG4D-203ENST00000585752 NDUFB4O95168 129 aa13.52□□□□□ -0.25
ATG4D-203ENST00000585752 CXorf1O96002 111 aa13.52□□□□□ -0.25
ATG4D-203ENST00000585752 LYPD1Q8N2G4 141 aa13.52□□□□□ -0.25
ATG4D-203ENST00000585752 PHYHIPLQ96FC7 376 aa13.52□□□□□ -0.25
ATG4D-203ENST00000585752 SLC35B3Q9H1N7 401 aa13.52□□□□□ -0.25
ATG4D-203ENST00000585752 CTXND1A0A1B0GTU2 59 aa13.51□□□□□ -0.25
ATG4D-203ENST00000585752 BOLA2-SMG1P6H3BVE0 249 aa13.51□□□□□ -0.25
ATG4D-203ENST00000585752 STAG3L2P0CL84 134 aa13.51□□□□□ -0.25
ATG4D-203ENST00000585752 STAG3L3P0CL85 134 aa13.51□□□□□ -0.25
ATG4D-203ENST00000585752 PRB4P10163 310 aaPredicted RBP13.51□□□□□ -0.25
ATG4D-203ENST00000585752 EIF5AL1Q6IS14 154 aaKnown RBP13.51□□□□□ -0.25
ATG4D-203ENST00000585752 BAP18Q8IXM2 172 aa13.51□□□□□ -0.25
ATG4D-203ENST00000585752 CMTM2Q8TAZ6 248 aa13.51□□□□□ -0.25
ATG4D-203ENST00000585752 ZNF503Q96F45 646 aa13.51□□□□□ -0.25
ATG4D-203ENST00000585752 Q9H3A6 140 aa13.51□□□□□ -0.25
ATG4D-203ENST00000585752 GOLT1BQ9Y3E0 138 aa13.51□□□□□ -0.25
ATG4D-203ENST00000585752 TMEM189A5PLL7 270 aa13.5□□□□□ -0.25
ATG4D-203ENST00000585752 SMIM9A6NGZ8 99 aa13.5□□□□□ -0.25
ATG4D-203ENST00000585752 M0R3E3 92 aa13.5□□□□□ -0.25
ATG4D-203ENST00000585752 SEC11BP0C7V7 166 aa13.5□□□□□ -0.25
ATG4D-203ENST00000585752 SPINK13Q1W4C9 94 aa13.5□□□□□ -0.25
ATG4D-203ENST00000585752 Q6ZTC4 211 aa13.5□□□□□ -0.25
ATG4D-203ENST00000585752 TMEM208Q9BTX3 173 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms