RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 OVOL2Q9BRP0 275 aa16.96■□□□□ 0.31
LSM7-202ENST00000585395 TP53TG1Q9Y2A0 90 aa16.96■□□□□ 0.31
LSM7-202ENST00000585395 RFNGQ9Y644 331 aa16.96■□□□□ 0.31
LSM7-202ENST00000585395 A0A0J9YX75 114 aa16.95■□□□□ 0.3
LSM7-202ENST00000585395 SNRPCP09234 159 aaKnown RBP16.95■□□□□ 0.3
LSM7-202ENST00000585395 EIF5AL1Q6IS14 154 aaKnown RBP16.95■□□□□ 0.3
LSM7-202ENST00000585395 RNF182Q8N6D2 247 aa16.95■□□□□ 0.3
LSM7-202ENST00000585395 OR4B1Q8NGF8 309 aa16.95■□□□□ 0.3
LSM7-202ENST00000585395 MRPL53Q96EL3 112 aaKnown RBP16.95■□□□□ 0.3
LSM7-202ENST00000585395 C20orf173Q96LM9 149 aa16.95■□□□□ 0.3
LSM7-202ENST00000585395 A0A1B0GVG6 124 aa16.94■□□□□ 0.3
LSM7-202ENST00000585395 H3BTX0 84 aa16.94■□□□□ 0.3
LSM7-202ENST00000585395 CA1P00915 261 aaPredicted RBP16.94■□□□□ 0.3
LSM7-202ENST00000585395 SEC11BP0C7V7 166 aa16.94■□□□□ 0.3
LSM7-202ENST00000585395 IGFL4Q6B9Z1 124 aa16.94■□□□□ 0.3
LSM7-202ENST00000585395 RPUSD4Q96CM3 377 aaKnown RBP16.94■□□□□ 0.3
LSM7-202ENST00000585395 SLC17A3O00476 420 aa16.93■□□□□ 0.3
LSM7-202ENST00000585395 OR10J4P0C629 311 aa16.93■□□□□ 0.3
LSM7-202ENST00000585395 BAP18Q8IXM2 172 aa16.93■□□□□ 0.3
LSM7-202ENST00000585395 LYPD1Q8N2G4 141 aa16.93■□□□□ 0.3
LSM7-202ENST00000585395 RPP25LQ8N5L8 163 aaKnown RBP16.93■□□□□ 0.3
LSM7-202ENST00000585395 FXYD5Q96DB9 178 aa16.93■□□□□ 0.3
LSM7-202ENST00000585395 UMAD1C9J7I0 102 aa16.92■□□□□ 0.3
LSM7-202ENST00000585395 OR10J6PQ8NGY7 276 aa16.92■□□□□ 0.3
LSM7-202ENST00000585395 RAB24Q969Q5 203 aa16.92■□□□□ 0.3
LSM7-202ENST00000585395 PPP1R14DQ9NXH3 145 aa16.92■□□□□ 0.3
LSM7-202ENST00000585395 CTXND1A0A1B0GTU2 59 aa16.91■□□□□ 0.3
LSM7-202ENST00000585395 CXorf1O96002 111 aa16.91■□□□□ 0.3
LSM7-202ENST00000585395 STAG3L2P0CL84 134 aa16.91■□□□□ 0.3
LSM7-202ENST00000585395 STAG3L3P0CL85 134 aa16.91■□□□□ 0.3
LSM7-202ENST00000585395 LGALSLQ3ZCW2 172 aaPredicted RBP16.91■□□□□ 0.3
LSM7-202ENST00000585395 FAM74A1Q5RGS3 127 aa16.91■□□□□ 0.3
LSM7-202ENST00000585395 OR8A1Q8NGG7 326 aa16.91■□□□□ 0.3
LSM7-202ENST00000585395 STOML3Q8TAV4 291 aa16.91■□□□□ 0.3
LSM7-202ENST00000585395 F6UB75 175 aa16.9■□□□□ 0.3
LSM7-202ENST00000585395 AMBPP02760 352 aa16.9■□□□□ 0.3
LSM7-202ENST00000585395 HLA-DMBP28068 263 aa16.9■□□□□ 0.3
LSM7-202ENST00000585395 CSN1S1P47710 185 aa16.9■□□□□ 0.3
LSM7-202ENST00000585395 HIST1H1AQ02539 215 aaPredicted RBP16.9■□□□□ 0.3
LSM7-202ENST00000585395 GDF5OSQ5U4N7 250 aa16.9■□□□□ 0.3
LSM7-202ENST00000585395 RNF183Q96D59 192 aa16.9■□□□□ 0.3
LSM7-202ENST00000585395 TMEM167BQ9NRX6 74 aa16.9■□□□□ 0.3
LSM7-202ENST00000585395 NDUFB4O95168 129 aa16.89■□□□□ 0.29
LSM7-202ENST00000585395 IGKV3-20P01619 116 aa16.89■□□□□ 0.29
LSM7-202ENST00000585395 SLC51BQ86UW2 128 aa16.89■□□□□ 0.29
LSM7-202ENST00000585395 ARL14EPLP0DKL9 152 aa16.88■□□□□ 0.29
LSM7-202ENST00000585395 CNN1P51911 297 aaKnown RBP16.88■□□□□ 0.29
LSM7-202ENST00000585395 DEFB1P60022 68 aa16.88■□□□□ 0.29
LSM7-202ENST00000585395 ICAM4Q14773 271 aa16.88■□□□□ 0.29
LSM7-202ENST00000585395 DPPA3Q6W0C5 159 aa16.88■□□□□ 0.29
LSM7-202ENST00000585395 ZNF503Q96F45 646 aa16.88■□□□□ 0.29
LSM7-202ENST00000585395 A0A0J9YWU9 116 aa16.87■□□□□ 0.29
LSM7-202ENST00000585395 HMGB3O15347 200 aaKnown RBP16.87■□□□□ 0.29
LSM7-202ENST00000585395 RANP62826 216 aaKnown RBP16.87■□□□□ 0.29
LSM7-202ENST00000585395 RXFP4Q8TDU9 374 aa16.87■□□□□ 0.29
LSM7-202ENST00000585395 A8MTW9 85 aa16.86■□□□□ 0.29
LSM7-202ENST00000585395 GCHFRP30047 84 aa16.86■□□□□ 0.29
LSM7-202ENST00000585395 IQCF2Q8IXL9 164 aa16.86■□□□□ 0.29
LSM7-202ENST00000585395 EXOC3-AS1Q8N2X6 119 aa16.86■□□□□ 0.29
LSM7-202ENST00000585395 CMTM2Q8TAZ6 248 aa16.86■□□□□ 0.29
LSM7-202ENST00000585395 PHYHIPLQ96FC7 376 aa16.86■□□□□ 0.29
LSM7-202ENST00000585395 Q9H3A6 140 aa16.86■□□□□ 0.29
LSM7-202ENST00000585395 ZNF705FA8MVS1 300 aaPredicted RBP16.85■□□□□ 0.29
LSM7-202ENST00000585395 C9orf62Q8N4C0 152 aa16.85■□□□□ 0.29
LSM7-202ENST00000585395 RARRES2Q99969 163 aa16.85■□□□□ 0.29
LSM7-202ENST00000585395 OTORQ9NRC9 128 aa16.85■□□□□ 0.29
LSM7-202ENST00000585395 AGRNO00468 2067 aa16.85■□□□□ 0.29
LSM7-202ENST00000585395 TSPOP30536 169 aa16.84■□□□□ 0.29
LSM7-202ENST00000585395 RAB5CP51148 216 aa16.84■□□□□ 0.29
LSM7-202ENST00000585395 CD300CQ08708 224 aa16.84■□□□□ 0.29
LSM7-202ENST00000585395 XCL2Q9UBD3 114 aa16.84■□□□□ 0.29
LSM7-202ENST00000585395 MAP1LC3B2A6NCE7 125 aa16.83■□□□□ 0.28
LSM7-202ENST00000585395 BOLA2-SMG1P6H3BVE0 249 aa16.83■□□□□ 0.28
LSM7-202ENST00000585395 M0R3E3 92 aa16.83■□□□□ 0.28
LSM7-202ENST00000585395 EIF3GO75821 320 aaKnown RBP eCLIP16.83■□□□□ 0.28
LSM7-202ENST00000585395 ARL6IP6Q8N6S5 226 aa16.83■□□□□ 0.28
LSM7-202ENST00000585395 OR11H2Q8NH07 326 aa16.83■□□□□ 0.28
LSM7-202ENST00000585395 TMED6Q8WW62 240 aa16.83■□□□□ 0.28
LSM7-202ENST00000585395 MAP1LC3BQ9GZQ8 125 aa16.83■□□□□ 0.28
LSM7-202ENST00000585395 CXorf65A6NEN9 183 aa16.82■□□□□ 0.28
LSM7-202ENST00000585395 ZNF705DP0CH99 300 aaPredicted RBP16.82■□□□□ 0.28
LSM7-202ENST00000585395 ZNF705BP0CI00 300 aaPredicted RBP16.82■□□□□ 0.28
LSM7-202ENST00000585395 PMS2P11Q13670 270 aa16.82■□□□□ 0.28
LSM7-202ENST00000585395 FAM213BQ8TBF2 198 aa16.82■□□□□ 0.28
LSM7-202ENST00000585395 LINC00477Q96M19 166 aa16.82■□□□□ 0.28
LSM7-202ENST00000585395 GOLT1BQ9Y3E0 138 aa16.82■□□□□ 0.28
LSM7-202ENST00000585395 NPIPB6E9PJ23 425 aa16.81■□□□□ 0.28
LSM7-202ENST00000585395 TMEM78Q5T7P6 136 aa16.81■□□□□ 0.28
LSM7-202ENST00000585395 AMTNQ6UX39 209 aa16.81■□□□□ 0.28
LSM7-202ENST00000585395 SUN5Q8TC36 379 aa16.81■□□□□ 0.28
LSM7-202ENST00000585395 ODF3Q96PU9 254 aa16.81■□□□□ 0.28
LSM7-202ENST00000585395 SLC35B3Q9H1N7 401 aa16.81■□□□□ 0.28
LSM7-202ENST00000585395 PGPA6NDG6 321 aa16.8■□□□□ 0.28
LSM7-202ENST00000585395 PRAC2D3DTV9 90 aa16.8■□□□□ 0.28
LSM7-202ENST00000585395 TEX46H3BTG2 121 aa16.8■□□□□ 0.28
LSM7-202ENST00000585395 INSP01308 110 aa16.8■□□□□ 0.28
LSM7-202ENST00000585395 GIG44P09565 113 aaPredicted RBP16.8■□□□□ 0.28
LSM7-202ENST00000585395 LEPP41159 167 aa16.8■□□□□ 0.28
LSM7-202ENST00000585395 FXYD7P58549 80 aa16.8■□□□□ 0.28
LSM7-202ENST00000585395 ZNF726P1Q15940 193 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms