RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 APELAP0DMC3 54 aa11.72□□□□□ -0.53
CDK5RAP3-236ENST00000584991 BTF3P20290 206 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-236ENST00000584991 A0A1B0GW15 77 aa11.72□□□□□ -0.53
CDK5RAP3-236ENST00000584991 K7EQM0 130 aa11.72□□□□□ -0.53
CDK5RAP3-236ENST00000584991 LY6EQ16553 131 aa11.72□□□□□ -0.53
CDK5RAP3-236ENST00000584991 C16orf54Q6UWD8 224 aa11.72□□□□□ -0.53
CDK5RAP3-236ENST00000584991 BPIFA4PQ86YQ2 179 aa11.72□□□□□ -0.53
CDK5RAP3-236ENST00000584991 ARL6IP6Q8N6S5 226 aa11.72□□□□□ -0.53
CDK5RAP3-236ENST00000584991 ZNF48Q96MX3 618 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-236ENST00000584991 IGLC2P0DOY2 106 aa11.71□□□□□ -0.53
CDK5RAP3-236ENST00000584991 IGLC3P0DOY3 106 aa11.71□□□□□ -0.53
CDK5RAP3-236ENST00000584991 FOSL1P15407 271 aa11.71□□□□□ -0.53
CDK5RAP3-236ENST00000584991 KRTAP1-1Q07627 177 aa11.71□□□□□ -0.53
CDK5RAP3-236ENST00000584991 TMEM75Q8N9X5 138 aa11.71□□□□□ -0.53
CDK5RAP3-236ENST00000584991 SHANK2-AS3Q9BTD1 123 aa11.71□□□□□ -0.53
CDK5RAP3-236ENST00000584991 WNT10AQ9GZT5 417 aa11.71□□□□□ -0.53
CDK5RAP3-236ENST00000584991 RNF114Q9Y508 228 aa11.71□□□□□ -0.53
CDK5RAP3-236ENST00000584991 FLNAP21333 2647 aaKnown RBP11.71□□□□□ -0.54
CDK5RAP3-236ENST00000584991 FAM181BA6NEQ2 426 aa11.7□□□□□ -0.54
CDK5RAP3-236ENST00000584991 M0R2Z0 102 aa11.7□□□□□ -0.54
CDK5RAP3-236ENST00000584991 HAX1O00165 279 aa11.7□□□□□ -0.54
CDK5RAP3-236ENST00000584991 CRXO43186 299 aaPredicted RBP11.7□□□□□ -0.54
CDK5RAP3-236ENST00000584991 OR5AL1P0C617 328 aa11.7□□□□□ -0.54
CDK5RAP3-236ENST00000584991 CAMPP49913 170 aa11.7□□□□□ -0.54
CDK5RAP3-236ENST00000584991 COL5A1-AS1Q5SY13 56 aa11.7□□□□□ -0.54
CDK5RAP3-236ENST00000584991 ZNF562Q6V9R5 426 aa11.7□□□□□ -0.54
CDK5RAP3-236ENST00000584991 Q86TA4 180 aa11.7□□□□□ -0.54
CDK5RAP3-236ENST00000584991 CD5LO43866 347 aa11.7□□□□□ -0.54
CDK5RAP3-236ENST00000584991 NTF3P20783 257 aa11.7□□□□□ -0.54
CDK5RAP3-236ENST00000584991 LYZP61626 148 aa11.7□□□□□ -0.54
CDK5RAP3-236ENST00000584991 C9orf139Q6ZV77 190 aa11.7□□□□□ -0.54
CDK5RAP3-236ENST00000584991 IL17RELQ6ZVW7 336 aa11.7□□□□□ -0.54
CDK5RAP3-236ENST00000584991 FAM19A2Q8N3H0 131 aa11.7□□□□□ -0.54
CDK5RAP3-236ENST00000584991 GATD1Q8NB37 220 aa11.7□□□□□ -0.54
CDK5RAP3-236ENST00000584991 OR4F17Q8NGA8 305 aa11.7□□□□□ -0.54
CDK5RAP3-236ENST00000584991 MOB4Q9Y3A3 225 aa11.7□□□□□ -0.54
CDK5RAP3-236ENST00000584991 SERTM2A0A1B0GWG4 89 aa11.69□□□□□ -0.54
CDK5RAP3-236ENST00000584991 A6NDX4 124 aa11.69□□□□□ -0.54
CDK5RAP3-236ENST00000584991 SH2D7A6NKC9 451 aaPredicted RBP11.69□□□□□ -0.54
CDK5RAP3-236ENST00000584991 IGKV1-17P01599 117 aa11.69□□□□□ -0.54
CDK5RAP3-236ENST00000584991 HLA-DRB1P01911 266 aa11.69□□□□□ -0.54
CDK5RAP3-236ENST00000584991 NDPQ00604 133 aa11.69□□□□□ -0.54
CDK5RAP3-236ENST00000584991 PDE6HQ13956 83 aa11.69□□□□□ -0.54
CDK5RAP3-236ENST00000584991 ZNF124Q15973 351 aa11.69□□□□□ -0.54
CDK5RAP3-236ENST00000584991 Q6AWC8 147 aa11.69□□□□□ -0.54
CDK5RAP3-236ENST00000584991 C5orf56Q8N8D9 126 aa11.69□□□□□ -0.54
CDK5RAP3-236ENST00000584991 OR2D3Q8NGH3 330 aa11.69□□□□□ -0.54
CDK5RAP3-236ENST00000584991 GTSF1Q8WW33 167 aa11.69□□□□□ -0.54
CDK5RAP3-236ENST00000584991 ARPC1AQ92747 370 aa11.69□□□□□ -0.54
CDK5RAP3-236ENST00000584991 MRPS16Q9Y3D3 137 aaKnown RBP11.69□□□□□ -0.54
CDK5RAP3-236ENST00000584991 MYO9AB2RTY4 2548 aa11.68□□□□□ -0.54
CDK5RAP3-236ENST00000584991 TRBV19A0A075B6N1 114 aa11.68□□□□□ -0.54
CDK5RAP3-236ENST00000584991 TRAV9-2A0A087WT02 112 aa11.68□□□□□ -0.54
CDK5RAP3-236ENST00000584991 IGHV7-81A0A0B4J1V7 117 aa11.68□□□□□ -0.54
CDK5RAP3-236ENST00000584991 FBLL1A6NHQ2 334 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP3-236ENST00000584991 H3BRN7 92 aa11.68□□□□□ -0.54
CDK5RAP3-236ENST00000584991 IGLV2-11P01706 119 aa11.68□□□□□ -0.54
CDK5RAP3-236ENST00000584991 YAE1D1Q9NRH1 226 aa11.68□□□□□ -0.54
CDK5RAP3-236ENST00000584991 C2orf70A6NJV1 201 aa11.68□□□□□ -0.54
CDK5RAP3-236ENST00000584991 K7EIM0 57 aa11.68□□□□□ -0.54
CDK5RAP3-236ENST00000584991 LINC00322Q6ZN03 302 aaPredicted RBP11.68□□□□□ -0.54
CDK5RAP3-236ENST00000584991 TCF24Q7RTU0 167 aa11.68□□□□□ -0.54
CDK5RAP3-236ENST00000584991 TMEM70Q9BUB7 260 aa11.68□□□□□ -0.54
CDK5RAP3-236ENST00000584991 WI2-2373I1.2A0A1W2PRP0 233 aa11.67□□□□□ -0.54
CDK5RAP3-236ENST00000584991 IGHV4-59P01825 116 aa11.67□□□□□ -0.54
CDK5RAP3-236ENST00000584991 S100A7P31151 101 aa11.67□□□□□ -0.54
CDK5RAP3-236ENST00000584991 RNASEKQ6P5S7 137 aaKnown RBP11.67□□□□□ -0.54
CDK5RAP3-236ENST00000584991 RPH3ALQ9UNE2 315 aa11.67□□□□□ -0.54
CDK5RAP3-236ENST00000584991 LOC102724200A0A096LPH7 203 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-236ENST00000584991 NPIPB5A8MRT5 1133 aa11.66□□□□□ -0.54
CDK5RAP3-236ENST00000584991 CHEK1O14757 476 aa11.66□□□□□ -0.54
CDK5RAP3-236ENST00000584991 DLEU1O43261 78 aa11.66□□□□□ -0.54
CDK5RAP3-236ENST00000584991 RIGQ13278 110 aa11.66□□□□□ -0.54
CDK5RAP3-236ENST00000584991 TEX29Q8N6K0 151 aa11.66□□□□□ -0.54
CDK5RAP3-236ENST00000584991 ZNF491Q8N8L2 437 aa11.66□□□□□ -0.54
CDK5RAP3-236ENST00000584991 TXN2Q99757 166 aa11.66□□□□□ -0.54
CDK5RAP3-236ENST00000584991 SSBP4Q9BWG4 385 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-236ENST00000584991 ACANP16112 2415 aa11.66□□□□□ -0.54
CDK5RAP3-236ENST00000584991 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-236ENST00000584991 SCGB2A1O75556 95 aa11.66□□□□□ -0.54
CDK5RAP3-236ENST00000584991 LINC00614P0C842 121 aa11.66□□□□□ -0.54
CDK5RAP3-236ENST00000584991 EGR2P11161 476 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-236ENST00000584991 ZNF25P17030 456 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-236ENST00000584991 HNRNPA3P51991 378 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP3-236ENST00000584991 ASPHD1Q5U4P2 390 aa11.66□□□□□ -0.54
CDK5RAP3-236ENST00000584991 Q6YL49 198 aa11.66□□□□□ -0.54
CDK5RAP3-236ENST00000584991 RNF125Q96EQ8 232 aa11.66□□□□□ -0.54
CDK5RAP3-236ENST00000584991 PGLYRP4Q96LB8 373 aa11.66□□□□□ -0.54
CDK5RAP3-236ENST00000584991 NOTCH2Q04721 2471 aa11.65□□□□□ -0.54
CDK5RAP3-236ENST00000584991 TLN2Q9Y4G6 2542 aa11.65□□□□□ -0.54
CDK5RAP3-236ENST00000584991 A0A1B0GUT8 65 aa11.65□□□□□ -0.54
CDK5RAP3-236ENST00000584991 LINC01548A6NM66 108 aa11.65□□□□□ -0.54
CDK5RAP3-236ENST00000584991 APOHP02749 345 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-236ENST00000584991 PSG3Q16557 428 aa11.65□□□□□ -0.54
CDK5RAP3-236ENST00000584991 LEMD1Q68G75 181 aa11.65□□□□□ -0.54
CDK5RAP3-236ENST00000584991 EBLN2Q6P2I7 272 aa11.65□□□□□ -0.54
CDK5RAP3-236ENST00000584991 SIGLEC15Q6ZMC9 328 aa11.65□□□□□ -0.54
CDK5RAP3-236ENST00000584991 Q6ZN92 141 aa11.65□□□□□ -0.54
CDK5RAP3-236ENST00000584991 GOLT1AQ6ZVE7 132 aa11.65□□□□□ -0.54
CDK5RAP3-236ENST00000584991 SGK494Q96LW2 274 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms