RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 SHANK2-AS3Q9BTD1 123 aa9.47□□□□□ -0.89
ERBB2-218ENST00000584450 MAP1LC3AQ9H492 121 aa9.47□□□□□ -0.89
ERBB2-218ENST00000584450 ADGRG4Q8IZF6 3080 aa9.46□□□□□ -0.89
ERBB2-218ENST00000584450 FABP5P3A8MUU1 101 aa9.46□□□□□ -0.89
ERBB2-218ENST00000584450 IGLV2-23P01705 113 aa9.46□□□□□ -0.89
ERBB2-218ENST00000584450 H3BUX3 64 aa9.46□□□□□ -0.89
ERBB2-218ENST00000584450 LBHQ53QV2 105 aaPredicted RBP9.46□□□□□ -0.89
ERBB2-218ENST00000584450 TRBV19A0A075B6N1 114 aa9.46□□□□□ -0.9
ERBB2-218ENST00000584450 SPRY2O43597 315 aa9.46□□□□□ -0.9
ERBB2-218ENST00000584450 MYOZ3Q8TDC0 251 aa9.46□□□□□ -0.9
ERBB2-218ENST00000584450 TMEM160Q9NX00 188 aa9.46□□□□□ -0.9
ERBB2-218ENST00000584450 DSCAML1Q8TD84 2053 aa9.46□□□□□ -0.9
ERBB2-218ENST00000584450 TRAV9-2A0A087WT02 112 aa9.45□□□□□ -0.9
ERBB2-218ENST00000584450 SH2D1AO60880 128 aa9.45□□□□□ -0.9
ERBB2-218ENST00000584450 CACNG7P62955 275 aa9.45□□□□□ -0.9
ERBB2-218ENST00000584450 PSG3Q16557 428 aa9.45□□□□□ -0.9
ERBB2-218ENST00000584450 Q8N7P7 452 aa9.45□□□□□ -0.9
ERBB2-218ENST00000584450 ZNF491Q8N8L2 437 aa9.45□□□□□ -0.9
ERBB2-218ENST00000584450 DPF1Q92782 380 aa9.45□□□□□ -0.9
ERBB2-218ENST00000584450 ZNF414Q96IQ9 312 aa9.45□□□□□ -0.9
ERBB2-218ENST00000584450 NAA38Q9BRA0 125 aaKnown RBP9.45□□□□□ -0.9
ERBB2-218ENST00000584450 GCSHP23434 173 aa9.45□□□□□ -0.9
ERBB2-218ENST00000584450 Q0VG73 95 aa9.45□□□□□ -0.9
ERBB2-218ENST00000584450 ZC2HC1AQ96GY0 325 aa9.45□□□□□ -0.9
ERBB2-218ENST00000584450 JMJD1CQ15652 2540 aa9.45□□□□□ -0.9
ERBB2-218ENST00000584450 TRAV8-6A0A0B4J262 113 aa9.45□□□□□ -0.9
ERBB2-218ENST00000584450 TMEM249Q2WGJ8 235 aa9.45□□□□□ -0.9
ERBB2-218ENST00000584450 IGF2-ASQ6U949 168 aa9.45□□□□□ -0.9
ERBB2-218ENST00000584450 C1orf159Q96HA4 380 aa9.45□□□□□ -0.9
ERBB2-218ENST00000584450 AKAP13Q12802 2813 aa9.44□□□□□ -0.9
ERBB2-218ENST00000584450 IGLV1-47P01700 117 aa9.44□□□□□ -0.9
ERBB2-218ENST00000584450 TMEM208Q9BTX3 173 aa9.44□□□□□ -0.9
ERBB2-218ENST00000584450 SMIM27A0A1W2PRY6 76 aa9.44□□□□□ -0.9
ERBB2-218ENST00000584450 RNASE4P34096 147 aaKnown RBP9.44□□□□□ -0.9
ERBB2-218ENST00000584450 IFI27P40305 119 aaPredicted RBP9.44□□□□□ -0.9
ERBB2-218ENST00000584450 CDSNQ15517 529 aa9.44□□□□□ -0.9
ERBB2-218ENST00000584450 C11orf44Q8N8P7 122 aa9.44□□□□□ -0.9
ERBB2-218ENST00000584450 THAP8Q8NA92 274 aa9.44□□□□□ -0.9
ERBB2-218ENST00000584450 ZNF502Q8TBZ5 544 aa9.44□□□□□ -0.9
ERBB2-218ENST00000584450 ALKBH7Q9BT30 221 aaPredicted RBP9.44□□□□□ -0.9
ERBB2-218ENST00000584450 PKD1L2Q7Z442 2459 aa9.44□□□□□ -0.9
ERBB2-218ENST00000584450 IGKV1D-37A0A075B6S9 117 aa9.44□□□□□ -0.9
ERBB2-218ENST00000584450 NPFFO15130 113 aa9.44□□□□□ -0.9
ERBB2-218ENST00000584450 ADORA2A-AS1P86434 159 aa9.44□□□□□ -0.9
ERBB2-218ENST00000584450 Q6ZVH6 145 aa9.44□□□□□ -0.9
ERBB2-218ENST00000584450 H3BVH4 76 aa9.43□□□□□ -0.9
ERBB2-218ENST00000584450 M0R1W7 72 aa9.43□□□□□ -0.9
ERBB2-218ENST00000584450 TRAV41A0A0B4J266 112 aa9.43□□□□□ -0.9
ERBB2-218ENST00000584450 K7EIM0 57 aa9.43□□□□□ -0.9
ERBB2-218ENST00000584450 NUTF2P61970 127 aaKnown RBP9.43□□□□□ -0.9
ERBB2-218ENST00000584450 COA6Q5JTJ3 125 aaKnown RBP9.43□□□□□ -0.9
ERBB2-218ENST00000584450 RNF5Q99942 180 aa9.43□□□□□ -0.9
ERBB2-218ENST00000584450 VGLL1Q99990 258 aa9.43□□□□□ -0.9
ERBB2-218ENST00000584450 TET2Q6N021 2002 aaPredicted RBP9.43□□□□□ -0.9
ERBB2-218ENST00000584450 IGHV3OR16-12A0A075B7B8 117 aa9.43□□□□□ -0.9
ERBB2-218ENST00000584450 PAX8Q06710 450 aa9.43□□□□□ -0.9
ERBB2-218ENST00000584450 SCGB1D4Q6XE38 83 aa9.43□□□□□ -0.9
ERBB2-218ENST00000584450 LINC00322Q6ZN03 302 aaPredicted RBP9.42□□□□□ -0.9
ERBB2-218ENST00000584450 LINC00173Q6ZV60 143 aa9.42□□□□□ -0.9
ERBB2-218ENST00000584450 ATP5L2Q7Z4Y8 100 aa9.42□□□□□ -0.9
ERBB2-218ENST00000584450 FOXC2Q99958 501 aa9.42□□□□□ -0.9
ERBB2-218ENST00000584450 SOX21Q9Y651 276 aaPredicted RBP9.42□□□□□ -0.9
ERBB2-218ENST00000584450 ZFP36P26651 326 aaKnown RBP9.42□□□□□ -0.9
ERBB2-218ENST00000584450 LEPP41159 167 aa9.42□□□□□ -0.9
ERBB2-218ENST00000584450 BCL6BQ8N143 479 aaPredicted RBP9.42□□□□□ -0.9
ERBB2-218ENST00000584450 A0A087X0K7 114 aa9.42□□□□□ -0.9
ERBB2-218ENST00000584450 RPS20P60866 119 aaKnown RBP9.42□□□□□ -0.9
ERBB2-218ENST00000584450 RPL24P83731 157 aaKnown RBP9.42□□□□□ -0.9
ERBB2-218ENST00000584450 MPV17L2Q567V2 206 aa9.42□□□□□ -0.9
ERBB2-218ENST00000584450 TEX22C9J3V5 150 aa9.41□□□□□ -0.9
ERBB2-218ENST00000584450 ZNF462Q96JM2 2506 aa9.41□□□□□ -0.9
ERBB2-218ENST00000584450 NRGNQ92686 78 aa9.41□□□□□ -0.9
ERBB2-218ENST00000584450 DMXL2Q8TDJ6 3036 aa9.41□□□□□ -0.9
ERBB2-218ENST00000584450 SYS1-DBNDD2H3BUS1 97 aa9.41□□□□□ -0.9
ERBB2-218ENST00000584450 I3L2K1 104 aa9.41□□□□□ -0.9
ERBB2-218ENST00000584450 GP9P14770 177 aa9.41□□□□□ -0.9
ERBB2-218ENST00000584450 FAM106AQ4KMX7 169 aa9.41□□□□□ -0.9
ERBB2-218ENST00000584450 TMEM97Q5BJF2 176 aa9.41□□□□□ -0.9
ERBB2-218ENST00000584450 STPG4Q8N801 248 aa9.41□□□□□ -0.9
ERBB2-218ENST00000584450 MINOS1Q5TGZ0 78 aa9.4□□□□□ -0.9
ERBB2-218ENST00000584450 MINOS1-NBL1R4GNA1 71 aa9.4□□□□□ -0.9
ERBB2-218ENST00000584450 FN1P02751 2386 aaKnown RBP9.4□□□□□ -0.9
ERBB2-218ENST00000584450 HAX1O00165 279 aa9.4□□□□□ -0.9
ERBB2-218ENST00000584450 SMAD7O15105 426 aaKnown RBP9.4□□□□□ -0.9
ERBB2-218ENST00000584450 RAB9AP51151 201 aa9.4□□□□□ -0.9
ERBB2-218ENST00000584450 C12orf54Q6X4T0 127 aa9.4□□□□□ -0.9
ERBB2-218ENST00000584450 IGF2BP2-AS1Q96M15 143 aa9.4□□□□□ -0.9
ERBB2-218ENST00000584450 COX6B1P14854 86 aa9.4□□□□□ -0.91
ERBB2-218ENST00000584450 GTSF1Q8WW33 167 aa9.4□□□□□ -0.91
ERBB2-218ENST00000584450 C2orf88Q9BSF0 95 aa9.4□□□□□ -0.91
ERBB2-218ENST00000584450 ACANP16112 2415 aa9.39□□□□□ -0.91
ERBB2-218ENST00000584450 IGLV2-8P01709 118 aa9.39□□□□□ -0.91
ERBB2-218ENST00000584450 IGLL1P15814 213 aa9.39□□□□□ -0.91
ERBB2-218ENST00000584450 TSPOP30536 169 aa9.39□□□□□ -0.91
ERBB2-218ENST00000584450 IL17RELQ6ZVW7 336 aa9.39□□□□□ -0.91
ERBB2-218ENST00000584450 SRSF9Q13242 221 aaKnown RBP eCLIP9.39□□□□□ -0.91
ERBB2-218ENST00000584450 Q6AWC8 147 aa9.39□□□□□ -0.91
ERBB2-218ENST00000584450 EBLN2Q6P2I7 272 aa9.39□□□□□ -0.91
ERBB2-218ENST00000584450 FAM159AQ6UWV7 190 aa9.39□□□□□ -0.91
ERBB2-218ENST00000584450 SIGLEC15Q6ZMC9 328 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms