RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 ZNF431Q8TF32 576 aaPredicted RBP7.38□□□□□ -1.23
CASC3-208ENST00000583649 C15orf40Q8WUR7 153 aa7.38□□□□□ -1.23
CASC3-208ENST00000583649 PXMP4Q9Y6I8 212 aa7.38□□□□□ -1.23
CASC3-208ENST00000583649 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.37□□□□□ -1.23
CASC3-208ENST00000583649 TRAV8-3A0A0A6YYJ7 113 aa7.37□□□□□ -1.23
CASC3-208ENST00000583649 C7orf71A4D174 169 aa7.37□□□□□ -1.23
CASC3-208ENST00000583649 PMS2P5A8MQ11 134 aa7.37□□□□□ -1.23
CASC3-208ENST00000583649 RGS13O14921 159 aa7.37□□□□□ -1.23
CASC3-208ENST00000583649 MPDU1O75352 247 aa7.37□□□□□ -1.23
CASC3-208ENST00000583649 IGLV2-11P01706 119 aa7.37□□□□□ -1.23
CASC3-208ENST00000583649 ANXA3P12429 323 aa7.37□□□□□ -1.23
CASC3-208ENST00000583649 GATA2P23769 480 aaPredicted RBP7.37□□□□□ -1.23
CASC3-208ENST00000583649 TIRAPP58753 221 aa7.37□□□□□ -1.23
CASC3-208ENST00000583649 TAS2R19P59542 299 aa7.37□□□□□ -1.23
CASC3-208ENST00000583649 KRTAP10-4P60372 401 aaPredicted RBP7.37□□□□□ -1.23
CASC3-208ENST00000583649 SRPXP78539 464 aa7.37□□□□□ -1.23
CASC3-208ENST00000583649 TOR2AQ5JU69 321 aa7.37□□□□□ -1.23
CASC3-208ENST00000583649 CIRBP-AS1Q8TBR5 109 aa7.37□□□□□ -1.23
CASC3-208ENST00000583649 BLNKQ8WV28 456 aa7.37□□□□□ -1.23
CASC3-208ENST00000583649 PARD6GQ9BYG4 376 aaPredicted RBP7.37□□□□□ -1.23
CASC3-208ENST00000583649 SH3BGRL3Q9H299 93 aa7.37□□□□□ -1.23
CASC3-208ENST00000583649 ZNF331Q9NQX6 463 aaPredicted RBP7.37□□□□□ -1.23
CASC3-208ENST00000583649 A0A0B4J2A0 478 aa7.36□□□□□ -1.23
CASC3-208ENST00000583649 RAB3DO95716 219 aa7.36□□□□□ -1.23
CASC3-208ENST00000583649 LINC00869P0C866 280 aa7.36□□□□□ -1.23
CASC3-208ENST00000583649 OR10J3Q5JRS4 329 aa7.36□□□□□ -1.23
CASC3-208ENST00000583649 Q6ZRU5 148 aa7.36□□□□□ -1.23
CASC3-208ENST00000583649 CYP2G1PQ6ZSU1 146 aa7.36□□□□□ -1.23
CASC3-208ENST00000583649 ACOT7LQ6ZUV0 252 aa7.36□□□□□ -1.23
CASC3-208ENST00000583649 BPIFA4PQ86YQ2 179 aa7.36□□□□□ -1.23
CASC3-208ENST00000583649 Q8N976 141 aa7.36□□□□□ -1.23
CASC3-208ENST00000583649 NHLRC2Q8NBF2 726 aa7.36□□□□□ -1.23
CASC3-208ENST00000583649 OR51S1Q8NGJ8 323 aa7.36□□□□□ -1.23
CASC3-208ENST00000583649 SCGB3A2Q96PL1 93 aa7.36□□□□□ -1.23
CASC3-208ENST00000583649 MRPL16Q9NX20 251 aaKnown RBP7.36□□□□□ -1.23
CASC3-208ENST00000583649 COMMD3Q9UBI1 195 aa7.36□□□□□ -1.23
CASC3-208ENST00000583649 SHPKQ9UHJ6 478 aa7.36□□□□□ -1.23
CASC3-208ENST00000583649 KLF12Q9Y4X4 402 aa7.36□□□□□ -1.23
CASC3-208ENST00000583649 SMCO3A2RU48 225 aa7.35□□□□□ -1.23
CASC3-208ENST00000583649 FABP12A6NFH5 140 aa7.35□□□□□ -1.23
CASC3-208ENST00000583649 DISC1C4P0D8 188 aa7.35□□□□□ -1.23
CASC3-208ENST00000583649 CT45A10P0DMU9 189 aa7.35□□□□□ -1.23
CASC3-208ENST00000583649 PLP1P60201 277 aa7.35□□□□□ -1.23
CASC3-208ENST00000583649 PXDC1Q5TGL8 231 aa7.35□□□□□ -1.23
CASC3-208ENST00000583649 FAT3Q8TDW7 4589 aa7.35□□□□□ -1.23
CASC3-208ENST00000583649 GPX1P07203 203 aa7.34□□□□□ -1.23
CASC3-208ENST00000583649 PFN1P07737 140 aaKnown RBP7.34□□□□□ -1.23
CASC3-208ENST00000583649 PRB4P10163 310 aaPredicted RBP7.34□□□□□ -1.23
CASC3-208ENST00000583649 GUK1Q16774 197 aa7.34□□□□□ -1.23
CASC3-208ENST00000583649 C4orf46Q504U0 113 aa7.34□□□□□ -1.23
CASC3-208ENST00000583649 FFAR4Q5NUL3 377 aa7.34□□□□□ -1.23
CASC3-208ENST00000583649 TEPPQ6URK8 271 aa7.34□□□□□ -1.23
CASC3-208ENST00000583649 TMEM229BQ8NBD8 167 aa7.34□□□□□ -1.23
CASC3-208ENST00000583649 ATP6V0E2Q8NHE4 81 aa7.34□□□□□ -1.23
CASC3-208ENST00000583649 RMI2Q96E14 147 aa7.34□□□□□ -1.23
CASC3-208ENST00000583649 RTBDNQ9BSG5 229 aaPredicted RBP7.34□□□□□ -1.23
CASC3-208ENST00000583649 ARL6Q9H0F7 186 aa7.34□□□□□ -1.23
CASC3-208ENST00000583649 MTFP1Q9UDX5 166 aa7.34□□□□□ -1.23
CASC3-208ENST00000583649 FAM25AB3EWG3 89 aa7.33□□□□□ -1.24
CASC3-208ENST00000583649 FAM25CB3EWG5 89 aa7.33□□□□□ -1.24
CASC3-208ENST00000583649 FAM25GB3EWG6 89 aa7.33□□□□□ -1.24
CASC3-208ENST00000583649 IGHV3-30P01768 117 aa7.33□□□□□ -1.24
CASC3-208ENST00000583649 IGHV3-33P01772 117 aa7.33□□□□□ -1.24
CASC3-208ENST00000583649 IGHV3-30-3P0DP02 117 aa7.33□□□□□ -1.24
CASC3-208ENST00000583649 IGHV3-30-5P0DP03 117 aa7.33□□□□□ -1.24
CASC3-208ENST00000583649 IAPPP10997 89 aa7.33□□□□□ -1.24
CASC3-208ENST00000583649 RNASE4P34096 147 aaKnown RBP7.33□□□□□ -1.24
CASC3-208ENST00000583649 RPS19P39019 145 aaKnown RBP7.33□□□□□ -1.24
CASC3-208ENST00000583649 ZNF846Q147U1 533 aa7.33□□□□□ -1.24
CASC3-208ENST00000583649 TMEM182Q6ZP80 229 aaPredicted RBP7.33□□□□□ -1.24
CASC3-208ENST00000583649 LINC00477Q96M19 166 aa7.33□□□□□ -1.24
CASC3-208ENST00000583649 ARV1Q9H2C2 271 aa7.33□□□□□ -1.24
CASC3-208ENST00000583649 DNAH8Q96JB1 4490 aa7.32□□□□□ -1.24
CASC3-208ENST00000583649 LECT2O14960 151 aa7.32□□□□□ -1.24
CASC3-208ENST00000583649 NMBP08949 121 aa7.32□□□□□ -1.24
CASC3-208ENST00000583649 POLR2GP62487 172 aaKnown RBP eCLIP7.32□□□□□ -1.24
CASC3-208ENST00000583649 SPANXN5Q5MJ07 72 aa7.32□□□□□ -1.24
CASC3-208ENST00000583649 FAM122CQ6P4D5 195 aa7.32□□□□□ -1.24
CASC3-208ENST00000583649 MZT2AQ6P582 158 aa7.32□□□□□ -1.24
CASC3-208ENST00000583649 LINC00305Q7Z4B0 112 aa7.32□□□□□ -1.24
CASC3-208ENST00000583649 LYZL2Q7Z4W2 148 aa7.32□□□□□ -1.24
CASC3-208ENST00000583649 OR10G4Q8NGN3 311 aa7.32□□□□□ -1.24
CASC3-208ENST00000583649 PRRT1Q99946 306 aa7.32□□□□□ -1.24
CASC3-208ENST00000583649 PAXXQ9BUH6 204 aa7.32□□□□□ -1.24
CASC3-208ENST00000583649 STRAPQ9Y3F4 350 aaKnown RBP7.32□□□□□ -1.24
CASC3-208ENST00000583649 IGHV1OR15-1A0A075B7D0 117 aa7.31□□□□□ -1.24
CASC3-208ENST00000583649 TRAV8-1A0A0A6YYK1 113 aa7.31□□□□□ -1.24
CASC3-208ENST00000583649 A0A0D9SG52 128 aa7.31□□□□□ -1.24
CASC3-208ENST00000583649 DUXBA0A1W2PPF3 345 aa7.31□□□□□ -1.24
CASC3-208ENST00000583649 KLLNB2CW77 178 aa7.31□□□□□ -1.24
CASC3-208ENST00000583649 PRAC2D3DTV9 90 aa7.31□□□□□ -1.24
CASC3-208ENST00000583649 SEC11BP0C7V7 166 aa7.31□□□□□ -1.24
CASC3-208ENST00000583649 SSBP1Q04837 148 aaKnown RBP7.31□□□□□ -1.24
CASC3-208ENST00000583649 LINC01620Q4KN68 170 aa7.31□□□□□ -1.24
CASC3-208ENST00000583649 C9orf47Q6ZRZ4 202 aa7.31□□□□□ -1.24
CASC3-208ENST00000583649 OR4D10Q8NGI6 311 aa7.31□□□□□ -1.24
CASC3-208ENST00000583649 OR52I2Q8NH67 350 aa7.31□□□□□ -1.24
CASC3-208ENST00000583649 YIPF6Q96EC8 236 aa7.31□□□□□ -1.24
CASC3-208ENST00000583649 SRRQ9GZT4 340 aa7.31□□□□□ -1.24
CASC3-208ENST00000583649 RAB26Q9ULW5 256 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms