RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 OTOGQ6ZRI0 2925 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 C2CD3Q4AC94 2353 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 IGHV3OR16-13A0A075B7E8 117 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 IGHV3-49A0A0A0MS15 119 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 IGHV3-74A0A0B4J1X5 117 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 XKRY2A2RUG3 117 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 C19orf71A6NCJ1 209 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 SNURFLB1AK76 121 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 NPIPB6E9PJ23 425 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 NDUFA4O00483 81 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 CHEK1O14757 476 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 BUB3O43684 328 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 IGLV1-40P01703 118 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 P01737 135 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 S100A8P05109 93 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 PRB4P10163 310 aaPredicted RBP4.23□□□□□ -1.73
CRLF3-204ENST00000583527 HLA-DMBP28068 263 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 IER3P46695 156 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 CSN1S1P47710 185 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 NDUFA6P56556 154 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 SLC35B1P78383 322 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 PSG9Q00887 426 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 PSG3Q16557 428 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 PDZD11Q5EBL8 140 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 COA6Q5JTJ3 125 aaKnown RBP4.23□□□□□ -1.73
CRLF3-204ENST00000583527 GFI1BQ5VTD9 330 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 C16orf54Q6UWD8 224 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 UNQ9165/PRO28630Q6UXU0 137 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 LINC00322Q6ZN03 302 aaPredicted RBP4.23□□□□□ -1.73
CRLF3-204ENST00000583527 C8orf86Q6ZUL3 223 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 IL17RELQ6ZVW7 336 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 TMEM183AQ8IXX5 376 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 LINC00518Q8N0U6 118 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 CIARTQ8N365 385 aaPredicted RBP4.23□□□□□ -1.73
CRLF3-204ENST00000583527 TSKUQ8WUA8 353 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 GLMPQ8WWB7 406 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 GRAMD2BQ96HH9 432 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 USMG5Q96IX5 58 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 ASCL2Q99929 193 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 SLC50A1Q9BRV3 221 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 NPFFR1Q9GZQ6 430 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 MRPL18Q9H0U6 180 aaKnown RBP4.23□□□□□ -1.73
CRLF3-204ENST00000583527 KLK15Q9H2R5 256 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 ZNF331Q9NQX6 463 aaPredicted RBP4.23□□□□□ -1.73
CRLF3-204ENST00000583527 PSG8Q9UQ74 426 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 TRAPPC1Q9Y5R8 145 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 SMAD5-AS1Q9Y6J3 95 aa4.23□□□□□ -1.73
CRLF3-204ENST00000583527 A0A1B0GUS0 222 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 A0A1B0GXF2 115 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 IZUMO1RA6ND01 250 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 HIGD1CA8MV81 97 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 HOXA3O43365 443 aaPredicted RBP4.22□□□□□ -1.73
CRLF3-204ENST00000583527 SPINK4O60575 86 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 IGHG4P01861 327 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 HLA-DQA1P01909 254 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 APOHP02749 345 aaPredicted RBP4.22□□□□□ -1.73
CRLF3-204ENST00000583527 FRMD6-AS1P0C7T7 363 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 CT45A10P0DMU9 189 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 HOXA5P20719 270 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 PSMB8P28062 276 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 CDX1P47902 265 aaPredicted RBP4.22□□□□□ -1.73
CRLF3-204ENST00000583527 MEOX2P50222 304 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 RPL19P84098 196 aaKnown RBP4.22□□□□□ -1.73
CRLF3-204ENST00000583527 C1orf194Q5T5A4 169 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 IGFL4Q6B9Z1 124 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 CYB5R2Q6BCY4 276 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 WDR73Q6P4I2 378 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 TMEM136Q6ZRR5 245 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 TCF24Q7RTU0 167 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 ATP5L2Q7Z4Y8 100 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 RNF182Q8N6D2 247 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 NUDT10Q8NFP7 164 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 OR4B1Q8NGF8 309 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 OR4X2Q8NGF9 303 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 MRPL53Q96EL3 112 aaKnown RBP4.22□□□□□ -1.73
CRLF3-204ENST00000583527 NUDT11Q96G61 164 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 C12orf57Q99622 126 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 NAT8BQ9UHF3 227 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 U3KQE9 123 aa4.22□□□□□ -1.73
CRLF3-204ENST00000583527 FLNBO75369 2602 aaKnown RBP4.22□□□□□ -1.73
CRLF3-204ENST00000583527 TRAV8-2A0A0B4J237 113 aa4.21□□□□□ -1.74
CRLF3-204ENST00000583527 A0A0G2JLM5 398 aa4.21□□□□□ -1.74
CRLF3-204ENST00000583527 TMEM89A2RUT3 159 aa4.21□□□□□ -1.74
CRLF3-204ENST00000583527 GRIFINA4D1Z8 144 aa4.21□□□□□ -1.74
CRLF3-204ENST00000583527 DNAJC9-AS1A6NH13 148 aa4.21□□□□□ -1.74
CRLF3-204ENST00000583527 FBLL1A6NHQ2 334 aaKnown RBP4.21□□□□□ -1.74
CRLF3-204ENST00000583527 ZNF785A8K8V0 405 aa4.21□□□□□ -1.74
CRLF3-204ENST00000583527 SOCS3O14543 225 aa4.21□□□□□ -1.74
CRLF3-204ENST00000583527 SMAD7O15105 426 aaKnown RBP4.21□□□□□ -1.74
CRLF3-204ENST00000583527 SH2D1AO60880 128 aa4.21□□□□□ -1.74
CRLF3-204ENST00000583527 AMBPP02760 352 aa4.21□□□□□ -1.74
CRLF3-204ENST00000583527 S100A2P29034 98 aa4.21□□□□□ -1.74
CRLF3-204ENST00000583527 RAB4BP61018 213 aa4.21□□□□□ -1.74
CRLF3-204ENST00000583527 KRTAP1-1Q07627 177 aa4.21□□□□□ -1.74
CRLF3-204ENST00000583527 FOXE3Q13461 319 aa4.21□□□□□ -1.74
CRLF3-204ENST00000583527 COX19Q49B96 90 aa4.21□□□□□ -1.74
CRLF3-204ENST00000583527 FAM209BQ5JX69 171 aa4.21□□□□□ -1.74
CRLF3-204ENST00000583527 LCE3BQ5TA77 95 aa4.21□□□□□ -1.74
CRLF3-204ENST00000583527 RASL11AQ6T310 242 aa4.21□□□□□ -1.74
CRLF3-204ENST00000583527 C10orf99Q6UWK7 81 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms