RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 RHEBQ15382 184 aa4.75□□□□□ -1.65
PTPRM-213ENST00000580949 HIST2H2BDQ6DRA6 164 aa4.75□□□□□ -1.65
PTPRM-213ENST00000580949 DGAT2L7PQ6IED9 249 aa4.75□□□□□ -1.65
PTPRM-213ENST00000580949 TEX38Q6PEX7 206 aa4.75□□□□□ -1.65
PTPRM-213ENST00000580949 C18orf65Q6ZTR6 163 aa4.75□□□□□ -1.65
PTPRM-213ENST00000580949 Q71RC1 249 aaPredicted RBP4.75□□□□□ -1.65
PTPRM-213ENST00000580949 LINC01551Q86U37 167 aa4.75□□□□□ -1.65
PTPRM-213ENST00000580949 EXOC3-AS1Q8N2X6 119 aa4.75□□□□□ -1.65
PTPRM-213ENST00000580949 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.75□□□□□ -1.65
PTPRM-213ENST00000580949 YPEL4Q96NS1 127 aa4.75□□□□□ -1.65
PTPRM-213ENST00000580949 Q9H3A6 140 aa4.75□□□□□ -1.65
PTPRM-213ENST00000580949 OTORQ9NRC9 128 aa4.75□□□□□ -1.65
PTPRM-213ENST00000580949 EPDR1Q9UM22 224 aa4.75□□□□□ -1.65
PTPRM-213ENST00000580949 HIVEP1P15822 2718 aa4.75□□□□□ -1.65
PTPRM-213ENST00000580949 HIVEP2P31629 2446 aa4.74□□□□□ -1.65
PTPRM-213ENST00000580949 ZFHX3Q15911 3703 aa4.74□□□□□ -1.65
PTPRM-213ENST00000580949 A0A087WWC5 75 aa4.74□□□□□ -1.65
PTPRM-213ENST00000580949 K7EN84 100 aa4.74□□□□□ -1.65
PTPRM-213ENST00000580949 NDUFA4O00483 81 aa4.74□□□□□ -1.65
PTPRM-213ENST00000580949 PEX7O00628 323 aa4.74□□□□□ -1.65
PTPRM-213ENST00000580949 ISLRO14498 428 aa4.74□□□□□ -1.65
PTPRM-213ENST00000580949 SCGB2A1O75556 95 aa4.74□□□□□ -1.65
PTPRM-213ENST00000580949 IGLV2-8P01709 118 aa4.74□□□□□ -1.65
PTPRM-213ENST00000580949 SLC25A5P05141 298 aaKnown RBP4.74□□□□□ -1.65
PTPRM-213ENST00000580949 EDN2P20800 178 aa4.74□□□□□ -1.65
PTPRM-213ENST00000580949 HNF1AP20823 631 aa4.74□□□□□ -1.65
PTPRM-213ENST00000580949 RELQ04864 619 aaPredicted RBP4.74□□□□□ -1.65
PTPRM-213ENST00000580949 PNRC1Q12796 327 aaPredicted RBP4.74□□□□□ -1.65
PTPRM-213ENST00000580949 FHL3Q13643 280 aa4.74□□□□□ -1.65
PTPRM-213ENST00000580949 ADIRFQ15847 76 aa4.74□□□□□ -1.65
PTPRM-213ENST00000580949 RNF212Q495C1 297 aa4.74□□□□□ -1.65
PTPRM-213ENST00000580949 CENPWQ5EE01 88 aa4.74□□□□□ -1.65
PTPRM-213ENST00000580949 SIGLEC15Q6ZMC9 328 aa4.74□□□□□ -1.65
PTPRM-213ENST00000580949 BPIFA4PQ86YQ2 179 aa4.74□□□□□ -1.65
PTPRM-213ENST00000580949 OR8I2Q8N0Y5 310 aa4.74□□□□□ -1.65
PTPRM-213ENST00000580949 OR4F17Q8NGA8 305 aa4.74□□□□□ -1.65
PTPRM-213ENST00000580949 WIPF2Q8TF74 440 aaPredicted RBP4.74□□□□□ -1.65
PTPRM-213ENST00000580949 ISOC2Q96AB3 205 aa4.74□□□□□ -1.65
PTPRM-213ENST00000580949 IGF2BP2-AS1Q96M15 143 aa4.74□□□□□ -1.65
PTPRM-213ENST00000580949 SMCO4Q9NRQ5 59 aa4.74□□□□□ -1.65
PTPRM-213ENST00000580949 PEF1Q9UBV8 284 aaKnown RBP4.74□□□□□ -1.65
PTPRM-213ENST00000580949 KLF12Q9Y4X4 402 aa4.74□□□□□ -1.65
PTPRM-213ENST00000580949 ZNF320A2RRD8 509 aa4.73□□□□□ -1.65
PTPRM-213ENST00000580949 B4DEV8 164 aa4.73□□□□□ -1.65
PTPRM-213ENST00000580949 C9JCJ5 164 aa4.73□□□□□ -1.65
PTPRM-213ENST00000580949 GGCTO75223 188 aaKnown RBP4.73□□□□□ -1.65
PTPRM-213ENST00000580949 IGLV2-11P01706 119 aa4.73□□□□□ -1.65
PTPRM-213ENST00000580949 TCRAP04437 139 aa4.73□□□□□ -1.65
PTPRM-213ENST00000580949 CD99P14209 185 aa4.73□□□□□ -1.65
PTPRM-213ENST00000580949 RPL7P18124 248 aaKnown RBP4.73□□□□□ -1.65
PTPRM-213ENST00000580949 SRD5A1P18405 259 aa4.73□□□□□ -1.65
PTPRM-213ENST00000580949 HLA-DMBP28068 263 aa4.73□□□□□ -1.65
PTPRM-213ENST00000580949 SLC35B1P78383 322 aa4.73□□□□□ -1.65
PTPRM-213ENST00000580949 OR5I1Q13606 314 aa4.73□□□□□ -1.65
PTPRM-213ENST00000580949 C1orf194Q5T5A4 169 aa4.73□□□□□ -1.65
PTPRM-213ENST00000580949 S100A7AQ86SG5 101 aa4.73□□□□□ -1.65
PTPRM-213ENST00000580949 KLHDC1Q8N7A1 406 aa4.73□□□□□ -1.65
PTPRM-213ENST00000580949 C5orf17Q8NAS9 161 aa4.73□□□□□ -1.65
PTPRM-213ENST00000580949 GLMPQ8WWB7 406 aa4.73□□□□□ -1.65
PTPRM-213ENST00000580949 TMEM190Q8WZ59 177 aa4.73□□□□□ -1.65
PTPRM-213ENST00000580949 HIST1H2BAQ96A08 127 aa4.73□□□□□ -1.65
PTPRM-213ENST00000580949 UBE2E2Q96LR5 201 aa4.73□□□□□ -1.65
PTPRM-213ENST00000580949 SGK494Q96LW2 274 aa4.73□□□□□ -1.65
PTPRM-213ENST00000580949 METTL26Q96S19 204 aa4.73□□□□□ -1.65
PTPRM-213ENST00000580949 TUBA4BQ9H853 241 aa4.73□□□□□ -1.65
PTPRM-213ENST00000580949 RNF24Q9Y225 148 aa4.73□□□□□ -1.65
PTPRM-213ENST00000580949 NF1P21359 2839 aa4.73□□□□□ -1.65
PTPRM-213ENST00000580949 IGHV4OR15-8A0A075B7B6 117 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 A0A087WW49 117 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 A0A087X0K7 114 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 TRAV8-1A0A0A6YYK1 113 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 TRAV8-2A0A0B4J237 113 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 CYSRT1A8MQ03 144 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 INAFM1C9JVW0 142 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 M0R3E3 92 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 SCGB1D1O95968 90 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 MT-ND4LP03901 98 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 LGALS1P09382 135 aaKnown RBP4.72□□□□□ -1.65
PTPRM-213ENST00000580949 GNG4P50150 75 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 CNN1P51911 297 aaKnown RBP4.72□□□□□ -1.65
PTPRM-213ENST00000580949 TAS2R60P59551 318 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 HILS1P60008 231 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 TMEM183BQ1AE95 376 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 GOLT1AQ6ZVE7 132 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 BAGE2Q86Y30 109 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 GPHB5Q86YW7 130 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 LYPD1Q8N2G4 141 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 FAM24BQ8N5W8 94 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 NHLRC2Q8NBF2 726 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 ASCL2Q99929 193 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 TCEAL7Q9BRU2 100 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 ATG101Q9BSB4 218 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 CTDSP1Q9GZU7 261 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 C16orf95Q9H693 158 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 TMEM242Q9NWH2 141 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 SMPXQ9UHP9 88 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 RPH3ALQ9UNE2 315 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 SELENOKQ9Y6D0 94 aa4.72□□□□□ -1.65
PTPRM-213ENST00000580949 COX11Q9Y6N1 276 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms