RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 PPP1R1CQ8WVI7 109 aa14.4□□□□□ -0.1
SMG8-204ENST00000580498 TMEM14CQ9P0S9 112 aa14.4□□□□□ -0.1
SMG8-204ENST00000580498 DNAH1Q9P2D7 4330 aa14.39□□□□□ -0.11
SMG8-204ENST00000580498 ZNF705GA8MUZ8 300 aaPredicted RBP14.39□□□□□ -0.11
SMG8-204ENST00000580498 H3BTX0 84 aa14.39□□□□□ -0.11
SMG8-204ENST00000580498 HIST1H1EP10412 219 aaKnown RBP14.39□□□□□ -0.11
SMG8-204ENST00000580498 LEPP41159 167 aa14.39□□□□□ -0.11
SMG8-204ENST00000580498 PDE6HQ13956 83 aa14.39□□□□□ -0.11
SMG8-204ENST00000580498 MORN5Q5VZ52 161 aa14.39□□□□□ -0.11
SMG8-204ENST00000580498 CCDC28AQ8IWP9 274 aa14.39□□□□□ -0.11
SMG8-204ENST00000580498 RPP25LQ8N5L8 163 aaKnown RBP14.39□□□□□ -0.11
SMG8-204ENST00000580498 THAP6Q8TBB0 222 aa14.39□□□□□ -0.11
SMG8-204ENST00000580498 MRPL53Q96EL3 112 aaKnown RBP14.39□□□□□ -0.11
SMG8-204ENST00000580498 C16orf74Q96GX8 76 aa14.39□□□□□ -0.11
SMG8-204ENST00000580498 OR5AC2Q9NZP5 309 aa14.39□□□□□ -0.11
SMG8-204ENST00000580498 TRAV5A0A0B4J249 113 aa14.38□□□□□ -0.11
SMG8-204ENST00000580498 H7BYZ3 331 aa14.38□□□□□ -0.11
SMG8-204ENST00000580498 CRXO43186 299 aaPredicted RBP14.38□□□□□ -0.11
SMG8-204ENST00000580498 IFNA5P01569 189 aa14.38□□□□□ -0.11
SMG8-204ENST00000580498 HTN1P15515 57 aa14.38□□□□□ -0.11
SMG8-204ENST00000580498 ZNF493Q6ZR52 646 aa14.38□□□□□ -0.11
SMG8-204ENST00000580498 SCGB1C1Q8TD33 95 aa14.38□□□□□ -0.11
SMG8-204ENST00000580498 MRPL32Q9BYC8 188 aaKnown RBP14.38□□□□□ -0.11
SMG8-204ENST00000580498 H3BQ15 152 aa14.37□□□□□ -0.11
SMG8-204ENST00000580498 SLC17A3O00476 420 aa14.37□□□□□ -0.11
SMG8-204ENST00000580498 UBE2DNLQ8IWF7 75 aa14.37□□□□□ -0.11
SMG8-204ENST00000580498 SAT2Q96F10 170 aaPredicted RBP14.37□□□□□ -0.11
SMG8-204ENST00000580498 ODF3Q96PU9 254 aa14.37□□□□□ -0.11
SMG8-204ENST00000580498 ATP5SQ99766 215 aa14.37□□□□□ -0.11
SMG8-204ENST00000580498 TRBV19A0A075B6N1 114 aa14.36□□□□□ -0.11
SMG8-204ENST00000580498 WDR61Q9GZS3 305 aaKnown RBP14.36□□□□□ -0.11
SMG8-204ENST00000580498 MPC2O95563 127 aa14.35□□□□□ -0.11
SMG8-204ENST00000580498 H2BFSP57053 126 aa14.35□□□□□ -0.11
SMG8-204ENST00000580498 BLNKQ8WV28 456 aa14.35□□□□□ -0.11
SMG8-204ENST00000580498 ZNF586Q9NXT0 402 aa14.35□□□□□ -0.11
SMG8-204ENST00000580498 TIMM8BQ9Y5J9 83 aaPredicted RBP14.35□□□□□ -0.11
SMG8-204ENST00000580498 PLECQ15149 4684 aaKnown RBP14.35□□□□□ -0.11
SMG8-204ENST00000580498 DEFB130BP0DP73 79 aa14.34□□□□□ -0.11
SMG8-204ENST00000580498 DEFB130AP0DP74 79 aa14.34□□□□□ -0.11
SMG8-204ENST00000580498 POM121L12Q8N7R1 296 aa14.34□□□□□ -0.11
SMG8-204ENST00000580498 C15orf53Q8NAA6 179 aa14.34□□□□□ -0.11
SMG8-204ENST00000580498 TMEM263Q8WUH6 116 aaKnown RBP14.34□□□□□ -0.11
SMG8-204ENST00000580498 HSPB11Q9Y547 144 aa14.34□□□□□ -0.11
SMG8-204ENST00000580498 H0YIZ8 118 aa14.33□□□□□ -0.12
SMG8-204ENST00000580498 RPL12P30050 165 aaKnown RBP14.33□□□□□ -0.12
SMG8-204ENST00000580498 TAS2R45P59539 299 aa14.33□□□□□ -0.12
SMG8-204ENST00000580498 OR51M1Q9H341 326 aa14.33□□□□□ -0.12
SMG8-204ENST00000580498 NPIPB6E9PJ23 425 aa14.32□□□□□ -0.12
SMG8-204ENST00000580498 CSN1S1P47710 185 aa14.32□□□□□ -0.12
SMG8-204ENST00000580498 LINC00477Q96M19 166 aa14.32□□□□□ -0.12
SMG8-204ENST00000580498 PAXXQ9BUH6 204 aa14.32□□□□□ -0.12
SMG8-204ENST00000580498 SNURFLB1AK76 121 aa14.31□□□□□ -0.12
SMG8-204ENST00000580498 PRAC2D3DTV9 90 aa14.31□□□□□ -0.12
SMG8-204ENST00000580498 OR7C2O60412 319 aa14.31□□□□□ -0.12
SMG8-204ENST00000580498 PTTG1O95997 202 aa14.31□□□□□ -0.12
SMG8-204ENST00000580498 ATP5G1P05496 136 aa14.31□□□□□ -0.12
SMG8-204ENST00000580498 NBEAP1P0C6P0 100 aa14.31□□□□□ -0.12
SMG8-204ENST00000580498 PYYP10082 97 aa14.31□□□□□ -0.12
SMG8-204ENST00000580498 ATP5G3P48201 142 aa14.31□□□□□ -0.12
SMG8-204ENST00000580498 TMEM78Q5T7P6 136 aa14.31□□□□□ -0.12
SMG8-204ENST00000580498 SLC25A2Q9BXI2 301 aa14.31□□□□□ -0.12
SMG8-204ENST00000580498 MBD2Q9UBB5 411 aa14.31□□□□□ -0.12
SMG8-204ENST00000580498 FUT9Q9Y231 359 aa14.31□□□□□ -0.12
SMG8-204ENST00000580498 J3KRW8 73 aa14.3□□□□□ -0.12
SMG8-204ENST00000580498 SLC25A5P05141 298 aaKnown RBP14.3□□□□□ -0.12
SMG8-204ENST00000580498 GCSAMLQ5JQS6 135 aa14.3□□□□□ -0.12
SMG8-204ENST00000580498 FFAR4Q5NUL3 377 aa14.3□□□□□ -0.12
SMG8-204ENST00000580498 GFI1BQ5VTD9 330 aa14.3□□□□□ -0.12
SMG8-204ENST00000580498 MIR17HGQ75NE6 70 aa14.3□□□□□ -0.12
SMG8-204ENST00000580498 PYGO2Q9BRQ0 406 aa14.3□□□□□ -0.12
SMG8-204ENST00000580498 PLA2G2EQ9NZK7 142 aa14.3□□□□□ -0.12
SMG8-204ENST00000580498 CBY3A6NI87 242 aa14.29□□□□□ -0.12
SMG8-204ENST00000580498 F5H768 121 aa14.29□□□□□ -0.12
SMG8-204ENST00000580498 PRB4P10163 310 aaPredicted RBP14.29□□□□□ -0.12
SMG8-204ENST00000580498 ICAM4Q14773 271 aa14.29□□□□□ -0.12
SMG8-204ENST00000580498 KHDC3LQ587J8 217 aa14.29□□□□□ -0.12
SMG8-204ENST00000580498 TMEM88Q6PEY1 159 aa14.29□□□□□ -0.12
SMG8-204ENST00000580498 SMIM3Q9BZL3 60 aa14.29□□□□□ -0.12
SMG8-204ENST00000580498 MED28Q9H204 178 aa14.29□□□□□ -0.12
SMG8-204ENST00000580498 TRAV12-3A0A0B4J271 114 aa14.28□□□□□ -0.12
SMG8-204ENST00000580498 M0R3E3 92 aa14.28□□□□□ -0.12
SMG8-204ENST00000580498 CT45A10P0DMU9 189 aa14.28□□□□□ -0.12
SMG8-204ENST00000580498 AZU1P20160 251 aa14.28□□□□□ -0.12
SMG8-204ENST00000580498 RNF141Q8WVD5 230 aa14.28□□□□□ -0.12
SMG8-204ENST00000580498 ATG101Q9BSB4 218 aa14.28□□□□□ -0.12
SMG8-204ENST00000580498 C7orf71A4D174 169 aa14.27□□□□□ -0.13
SMG8-204ENST00000580498 PRM2P04554 102 aa14.27□□□□□ -0.13
SMG8-204ENST00000580498 UBE2L3P68036 154 aaKnown RBP14.27□□□□□ -0.13
SMG8-204ENST00000580498 ACOT6Q3I5F7 207 aaPredicted RBP14.27□□□□□ -0.13
SMG8-204ENST00000580498 RNF212Q495C1 297 aa14.27□□□□□ -0.13
SMG8-204ENST00000580498 FAM74A1Q5RGS3 127 aa14.27□□□□□ -0.13
SMG8-204ENST00000580498 FAM122CQ6P4D5 195 aa14.27□□□□□ -0.13
SMG8-204ENST00000580498 LYPD1Q8N2G4 141 aa14.27□□□□□ -0.13
SMG8-204ENST00000580498 EXOC3-AS1Q8N2X6 119 aa14.27□□□□□ -0.13
SMG8-204ENST00000580498 ZNF680Q8NEM1 530 aa14.27□□□□□ -0.13
SMG8-204ENST00000580498 RNASE8Q8TDE3 154 aaKnown RBP14.27□□□□□ -0.13
SMG8-204ENST00000580498 PARD6GQ9BYG4 376 aaPredicted RBP14.27□□□□□ -0.13
SMG8-204ENST00000580498 NOP10Q9NPE3 64 aaKnown RBP14.27□□□□□ -0.13
SMG8-204ENST00000580498 ALG5Q9Y673 324 aa14.27□□□□□ -0.13
SMG8-204ENST00000580498 HYDINQ4G0P3 5121 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms