RNA–Protein interactions for RNA: ENST00000580013.5

TSEN54-207, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 4

Gene TSEN54, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-207ENST00000580013 CDC34P49427 236 aaPredicted RBP15.79■□□□□ 0.12
TSEN54-207ENST00000580013 PSG9Q00887 426 aa15.79■□□□□ 0.12
TSEN54-207ENST00000580013 ZNF726P1Q15940 193 aa15.79■□□□□ 0.12
TSEN54-207ENST00000580013 PQLC2Q6ZP29 291 aa15.79■□□□□ 0.12
TSEN54-207ENST00000580013 SSX7Q7RTT5 188 aa15.79■□□□□ 0.12
TSEN54-207ENST00000580013 BLNKQ8WV28 456 aa15.79■□□□□ 0.12
TSEN54-207ENST00000580013 MRPL53Q96EL3 112 aaKnown RBP15.79■□□□□ 0.12
TSEN54-207ENST00000580013 CA1P00915 261 aaPredicted RBP15.78■□□□□ 0.12
TSEN54-207ENST00000580013 SEC11BP0C7V7 166 aa15.78■□□□□ 0.12
TSEN54-207ENST00000580013 CNN1P51911 297 aaKnown RBP15.78■□□□□ 0.12
TSEN54-207ENST00000580013 DEFB135Q30KP9 77 aa15.78■□□□□ 0.12
TSEN54-207ENST00000580013 STOML3Q8TAV4 291 aa15.78■□□□□ 0.12
TSEN54-207ENST00000580013 ZNF471Q9BX82 626 aaPredicted RBP15.78■□□□□ 0.12
TSEN54-207ENST00000580013 ACTR3CQ9C0K3 210 aaPredicted RBP15.78■□□□□ 0.12
TSEN54-207ENST00000580013 HMGB3O15347 200 aaKnown RBP15.77■□□□□ 0.12
TSEN54-207ENST00000580013 DUSP14O95147 198 aaKnown RBP15.77■□□□□ 0.12
TSEN54-207ENST00000580013 PRB4P10163 310 aaPredicted RBP15.77■□□□□ 0.12
TSEN54-207ENST00000580013 BAP18Q8IXM2 172 aa15.77■□□□□ 0.12
TSEN54-207ENST00000580013 LYPD1Q8N2G4 141 aa15.77■□□□□ 0.12
TSEN54-207ENST00000580013 EXOC3-AS1Q8N2X6 119 aa15.77■□□□□ 0.12
TSEN54-207ENST00000580013 PHYHIPLQ96FC7 376 aa15.77■□□□□ 0.12
TSEN54-207ENST00000580013 PRELID1Q9Y255 219 aa15.77■□□□□ 0.12
TSEN54-207ENST00000580013 M0R3E3 92 aa15.76■□□□□ 0.11
TSEN54-207ENST00000580013 IGKV3-20P01619 116 aa15.76■□□□□ 0.11
TSEN54-207ENST00000580013 C9orf62Q8N4C0 152 aa15.76■□□□□ 0.11
TSEN54-207ENST00000580013 OR4B1Q8NGF8 309 aa15.76■□□□□ 0.11
TSEN54-207ENST00000580013 PFDN1O60925 122 aa15.75■□□□□ 0.11
TSEN54-207ENST00000580013 ARL14EPLP0DKL9 152 aa15.75■□□□□ 0.11
TSEN54-207ENST00000580013 NUTF2P61970 127 aaKnown RBP15.75■□□□□ 0.11
TSEN54-207ENST00000580013 UBE2L3P68036 154 aaKnown RBP15.75■□□□□ 0.11
TSEN54-207ENST00000580013 ICAM4Q14773 271 aa15.75■□□□□ 0.11
TSEN54-207ENST00000580013 SLC35B3Q9H1N7 401 aa15.75■□□□□ 0.11
TSEN54-207ENST00000580013 RANP62826 216 aaKnown RBP15.74■□□□□ 0.11
TSEN54-207ENST00000580013 EIF5AP63241 154 aaKnown RBP15.74■□□□□ 0.11
TSEN54-207ENST00000580013 AKR1C8PQ5T2L2 129 aa15.74■□□□□ 0.11
TSEN54-207ENST00000580013 EDA2RQ9HAV5 297 aa15.74■□□□□ 0.11
TSEN54-207ENST00000580013 CTXND1A0A1B0GTU2 59 aa15.73■□□□□ 0.11
TSEN54-207ENST00000580013 TPT1P13693 172 aaKnown RBP15.73■□□□□ 0.11
TSEN54-207ENST00000580013 GCHFRP30047 84 aa15.73■□□□□ 0.11
TSEN54-207ENST00000580013 HIST1H1AQ02539 215 aaPredicted RBP15.73■□□□□ 0.11
TSEN54-207ENST00000580013 ZFP69Q49AA0 526 aa15.73■□□□□ 0.11
TSEN54-207ENST00000580013 Q9H3A6 140 aa15.73■□□□□ 0.11
TSEN54-207ENST00000580013 CXorf1O96002 111 aa15.72■□□□□ 0.11
TSEN54-207ENST00000580013 FXYD7P58549 80 aa15.72■□□□□ 0.11
TSEN54-207ENST00000580013 AAMDCQ9H7C9 122 aa15.72■□□□□ 0.11
TSEN54-207ENST00000580013 XCL2Q9UBD3 114 aa15.72■□□□□ 0.11
TSEN54-207ENST00000580013 ZNF705EA8MWA4 302 aaPredicted RBP15.71■□□□□ 0.11
TSEN54-207ENST00000580013 UMAD1C9J7I0 102 aa15.71■□□□□ 0.11
TSEN54-207ENST00000580013 NPIPB6E9PJ23 425 aa15.71■□□□□ 0.11
TSEN54-207ENST00000580013 CRXO43186 299 aaPredicted RBP15.71■□□□□ 0.11
TSEN54-207ENST00000580013 FHITP49789 147 aa15.71■□□□□ 0.11
TSEN54-207ENST00000580013 C1QTNF4Q9BXJ3 329 aa15.71■□□□□ 0.11
TSEN54-207ENST00000580013 CT45A10P0DMU9 189 aa15.7■□□□□ 0.1
TSEN54-207ENST00000580013 SLC51BQ86UW2 128 aa15.7■□□□□ 0.1
TSEN54-207ENST00000580013 ARL6IP6Q8N6S5 226 aa15.7■□□□□ 0.1
TSEN54-207ENST00000580013 OR11H2Q8NH07 326 aa15.7■□□□□ 0.1
TSEN54-207ENST00000580013 TMED6Q8WW62 240 aa15.7■□□□□ 0.1
TSEN54-207ENST00000580013 MBD3L1Q8WWY6 194 aa15.7■□□□□ 0.1
TSEN54-207ENST00000580013 OTORQ9NRC9 128 aa15.7■□□□□ 0.1
TSEN54-207ENST00000580013 PGPA6NDG6 321 aa15.69■□□□□ 0.1
TSEN54-207ENST00000580013 ZNF705AQ6ZN79 300 aaPredicted RBP15.69■□□□□ 0.1
TSEN54-207ENST00000580013 C9orf47Q6ZRZ4 202 aa15.69■□□□□ 0.1
TSEN54-207ENST00000580013 OR10J6PQ8NGY7 276 aa15.69■□□□□ 0.1
TSEN54-207ENST00000580013 RARRES2Q99969 163 aa15.69■□□□□ 0.1
TSEN54-207ENST00000580013 AGPAT4-IT1Q9H0P7 198 aa15.69■□□□□ 0.1
TSEN54-207ENST00000580013 TMEM167BQ9NRX6 74 aa15.69■□□□□ 0.1
TSEN54-207ENST00000580013 X6R8D5 127 aa15.69■□□□□ 0.1
TSEN54-207ENST00000580013 ERCC8Q13216 396 aa15.68■□□□□ 0.1
TSEN54-207ENST00000580013 C1orf158Q8N1D5 194 aa15.68■□□□□ 0.1
TSEN54-207ENST00000580013 FAM19A4Q96LR4 140 aa15.68■□□□□ 0.1
TSEN54-207ENST00000580013 LINC00477Q96M19 166 aa15.68■□□□□ 0.1
TSEN54-207ENST00000580013 WWC2-AS2Q96NR7 200 aa15.68■□□□□ 0.1
TSEN54-207ENST00000580013 TMPRSS5Q9H3S3 457 aa15.68■□□□□ 0.1
TSEN54-207ENST00000580013 BOLA2-SMG1P6H3BVE0 249 aa15.67■□□□□ 0.1
TSEN54-207ENST00000580013 M0R2Z0 102 aa15.67■□□□□ 0.1
TSEN54-207ENST00000580013 AMBPP02760 352 aa15.67■□□□□ 0.1
TSEN54-207ENST00000580013 SPINK13Q1W4C9 94 aa15.67■□□□□ 0.1
TSEN54-207ENST00000580013 DPPA3Q6W0C5 159 aa15.67■□□□□ 0.1
TSEN54-207ENST00000580013 IGF2BP2-AS1Q96M15 143 aa15.67■□□□□ 0.1
TSEN54-207ENST00000580013 ODF3Q96PU9 254 aa15.67■□□□□ 0.1
TSEN54-207ENST00000580013 DIRC3C9JPN6 131 aa15.66■□□□□ 0.1
TSEN54-207ENST00000580013 NKX2-5P52952 324 aaPredicted RBP15.66■□□□□ 0.1
TSEN54-207ENST00000580013 FGF8P55075 233 aaPredicted RBP15.66■□□□□ 0.1
TSEN54-207ENST00000580013 RXFP4Q8TDU9 374 aa15.66■□□□□ 0.1
TSEN54-207ENST00000580013 VGLL1Q99990 258 aa15.66■□□□□ 0.1
TSEN54-207ENST00000580013 RBAKDNA6NC62 111 aa15.65■□□□□ 0.1
TSEN54-207ENST00000580013 MAP1LC3B2A6NCE7 125 aa15.65■□□□□ 0.1
TSEN54-207ENST00000580013 KIR3DS1Q14943 382 aa15.65■□□□□ 0.1
TSEN54-207ENST00000580013 Q8NAQ8 132 aa15.65■□□□□ 0.1
TSEN54-207ENST00000580013 NEU1Q99519 415 aa15.65■□□□□ 0.1
TSEN54-207ENST00000580013 MAP1LC3BQ9GZQ8 125 aa15.65■□□□□ 0.1
TSEN54-207ENST00000580013 IGKV2-40A0A087WW87 121 aaPredicted RBP15.64■□□□□ 0.09
TSEN54-207ENST00000580013 A0A1W2PRE2 83 aa15.64■□□□□ 0.09
TSEN54-207ENST00000580013 IGKV2D-40P01614 121 aaPredicted RBP15.64■□□□□ 0.09
TSEN54-207ENST00000580013 SLC25A5P05141 298 aaKnown RBP15.64■□□□□ 0.09
TSEN54-207ENST00000580013 CSN1S1P47710 185 aa15.64■□□□□ 0.09
TSEN54-207ENST00000580013 EIF5AL1Q6IS14 154 aaKnown RBP15.64■□□□□ 0.09
TSEN54-207ENST00000580013 PPP1R14DQ9NXH3 145 aa15.64■□□□□ 0.09
TSEN54-207ENST00000580013 RBMY1A1P0DJD3 496 aaKnown RBP15.63■□□□□ 0.09
TSEN54-207ENST00000580013 RBMY1CP0DJD4 496 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms