RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 C9orf170A2RU37 121 aa8.92□□□□□ -0.98
CDK5RAP3-213ENST00000579605 NPIPB6E9PJ23 425 aa8.92□□□□□ -0.98
CDK5RAP3-213ENST00000579605 CXCL3P19876 107 aa8.92□□□□□ -0.98
CDK5RAP3-213ENST00000579605 ANXA7P20073 488 aaKnown RBP8.92□□□□□ -0.98
CDK5RAP3-213ENST00000579605 SMIM8Q96KF7 97 aa8.92□□□□□ -0.98
CDK5RAP3-213ENST00000579605 ARL6Q9H0F7 186 aa8.92□□□□□ -0.98
CDK5RAP3-213ENST00000579605 NPVFQ9HCQ7 196 aa8.92□□□□□ -0.98
CDK5RAP3-213ENST00000579605 MGAT4CQ9UBM8 478 aa8.92□□□□□ -0.98
CDK5RAP3-213ENST00000579605 CCDC160A6NGH7 325 aa8.91□□□□□ -0.98
CDK5RAP3-213ENST00000579605 PMS2P5A8MQ11 134 aa8.91□□□□□ -0.98
CDK5RAP3-213ENST00000579605 H3BNG1 76 aa8.91□□□□□ -0.98
CDK5RAP3-213ENST00000579605 METTL15P1P0C7V9 234 aa8.91□□□□□ -0.98
CDK5RAP3-213ENST00000579605 PRB4P10163 310 aaPredicted RBP8.91□□□□□ -0.98
CDK5RAP3-213ENST00000579605 INPP1P49441 399 aa8.91□□□□□ -0.98
CDK5RAP3-213ENST00000579605 OR10P1Q8NGE3 313 aa8.91□□□□□ -0.98
CDK5RAP3-213ENST00000579605 VSIG2Q96IQ7 327 aa8.91□□□□□ -0.98
CDK5RAP3-213ENST00000579605 MSRB1Q9NZV6 116 aa8.91□□□□□ -0.98
CDK5RAP3-213ENST00000579605 TRAV9-2A0A087WT02 112 aa8.9□□□□□ -0.98
CDK5RAP3-213ENST00000579605 FNDC10F2Z333 226 aa8.9□□□□□ -0.98
CDK5RAP3-213ENST00000579605 CCNKO75909 580 aa8.9□□□□□ -0.98
CDK5RAP3-213ENST00000579605 SCGB1D2O95969 90 aa8.9□□□□□ -0.98
CDK5RAP3-213ENST00000579605 CDKN1BP46527 198 aa8.9□□□□□ -0.98
CDK5RAP3-213ENST00000579605 SLC38A11Q08AI6 406 aa8.9□□□□□ -0.98
CDK5RAP3-213ENST00000579605 TEPPQ6URK8 271 aa8.9□□□□□ -0.98
CDK5RAP3-213ENST00000579605 TMEM14EPQ6UXP3 125 aa8.9□□□□□ -0.98
CDK5RAP3-213ENST00000579605 ZNF493Q6ZR52 646 aa8.9□□□□□ -0.98
CDK5RAP3-213ENST00000579605 RPUSD4Q96CM3 377 aaKnown RBP8.9□□□□□ -0.98
CDK5RAP3-213ENST00000579605 ARV1Q9H2C2 271 aa8.9□□□□□ -0.98
CDK5RAP3-213ENST00000579605 TMPRSS5Q9H3S3 457 aa8.9□□□□□ -0.98
CDK5RAP3-213ENST00000579605 LRP2P98164 4655 aa8.9□□□□□ -0.99
CDK5RAP3-213ENST00000579605 NAP1L6A6NFF2 107 aa8.89□□□□□ -0.99
CDK5RAP3-213ENST00000579605 GOSR2O14653 212 aa8.89□□□□□ -0.99
CDK5RAP3-213ENST00000579605 NDUFB6O95139 128 aa8.89□□□□□ -0.99
CDK5RAP3-213ENST00000579605 RLN2P04090 185 aa8.89□□□□□ -0.99
CDK5RAP3-213ENST00000579605 CXCL2P19875 107 aa8.89□□□□□ -0.99
CDK5RAP3-213ENST00000579605 SPANXN2Q5MJ10 180 aa8.89□□□□□ -0.99
CDK5RAP3-213ENST00000579605 PXDC1Q5TGL8 231 aa8.89□□□□□ -0.99
CDK5RAP3-213ENST00000579605 PATE2Q6UY27 113 aa8.89□□□□□ -0.99
CDK5RAP3-213ENST00000579605 ZNF546Q86UE3 836 aa8.89□□□□□ -0.99
CDK5RAP3-213ENST00000579605 CCDC190Q86UF4 302 aa8.89□□□□□ -0.99
CDK5RAP3-213ENST00000579605 RNASE8Q8TDE3 154 aaKnown RBP8.89□□□□□ -0.99
CDK5RAP3-213ENST00000579605 TMEM263Q8WUH6 116 aaKnown RBP8.89□□□□□ -0.99
CDK5RAP3-213ENST00000579605 FLVCR2Q9UPI3 526 aa8.89□□□□□ -0.99
CDK5RAP3-213ENST00000579605 H7BYZ3 331 aa8.88□□□□□ -0.99
CDK5RAP3-213ENST00000579605 K7EPK0 472 aa8.88□□□□□ -0.99
CDK5RAP3-213ENST00000579605 MRPS12O15235 138 aaKnown RBP8.88□□□□□ -0.99
CDK5RAP3-213ENST00000579605 PSCAO43653 123 aa8.88□□□□□ -0.99
CDK5RAP3-213ENST00000579605 TSC22D2O75157 780 aa8.88□□□□□ -0.99
CDK5RAP3-213ENST00000579605 OR4E1P0C645 316 aa8.88□□□□□ -0.99
CDK5RAP3-213ENST00000579605 TAS2R30P59541 319 aa8.88□□□□□ -0.99
CDK5RAP3-213ENST00000579605 IAH1Q2TAA2 248 aaPredicted RBP8.88□□□□□ -0.99
CDK5RAP3-213ENST00000579605 C4orf46Q504U0 113 aa8.88□□□□□ -0.99
CDK5RAP3-213ENST00000579605 TRIQKQ629K1 86 aa8.88□□□□□ -0.99
CDK5RAP3-213ENST00000579605 LCN15Q6UWW0 184 aa8.88□□□□□ -0.99
CDK5RAP3-213ENST00000579605 LINC00305Q7Z4B0 112 aa8.88□□□□□ -0.99
CDK5RAP3-213ENST00000579605 CCDC28AQ8IWP9 274 aa8.88□□□□□ -0.99
CDK5RAP3-213ENST00000579605 NTN5Q8WTR8 489 aaPredicted RBP8.88□□□□□ -0.99
CDK5RAP3-213ENST00000579605 C20orf144Q9BQM9 153 aa8.88□□□□□ -0.99
CDK5RAP3-213ENST00000579605 SLC50A1Q9BRV3 221 aa8.88□□□□□ -0.99
CDK5RAP3-213ENST00000579605 SRRQ9GZT4 340 aa8.88□□□□□ -0.99
CDK5RAP3-213ENST00000579605 LY96Q9Y6Y9 160 aa8.88□□□□□ -0.99
CDK5RAP3-213ENST00000579605 LINC00854A0A1B0GVQ3 168 aa8.87□□□□□ -0.99
CDK5RAP3-213ENST00000579605 COX7A2P2O60397 106 aa8.87□□□□□ -0.99
CDK5RAP3-213ENST00000579605 SNRPCP09234 159 aaKnown RBP8.87□□□□□ -0.99
CDK5RAP3-213ENST00000579605 BPIFA4PQ86YQ2 179 aa8.87□□□□□ -0.99
CDK5RAP3-213ENST00000579605 LINC00612Q8N6U2 182 aa8.87□□□□□ -0.99
CDK5RAP3-213ENST00000579605 ZBTB8BQ8NAP8 495 aaPredicted RBP8.87□□□□□ -0.99
CDK5RAP3-213ENST00000579605 ZNF331Q9NQX6 463 aaPredicted RBP8.87□□□□□ -0.99
CDK5RAP3-213ENST00000579605 GSKIPQ9P0R6 139 aa8.87□□□□□ -0.99
CDK5RAP3-213ENST00000579605 CENPXA8MT69 81 aa8.86□□□□□ -0.99
CDK5RAP3-213ENST00000579605 SNURFLB1AK76 121 aa8.86□□□□□ -0.99
CDK5RAP3-213ENST00000579605 AGPAT2O15120 278 aa8.86□□□□□ -0.99
CDK5RAP3-213ENST00000579605 BAK1Q16611 211 aa8.86□□□□□ -0.99
CDK5RAP3-213ENST00000579605 GGACTQ9BVM4 153 aa8.86□□□□□ -0.99
CDK5RAP3-213ENST00000579605 LRCOL1A6NCL2 159 aa8.85□□□□□ -0.99
CDK5RAP3-213ENST00000579605 H3BTX0 84 aa8.85□□□□□ -0.99
CDK5RAP3-213ENST00000579605 L7N2F9 121 aa8.85□□□□□ -0.99
CDK5RAP3-213ENST00000579605 ASIPP42127 132 aa8.85□□□□□ -0.99
CDK5RAP3-213ENST00000579605 VAMP2P63027 116 aa8.85□□□□□ -0.99
CDK5RAP3-213ENST00000579605 ARL16Q0P5N6 197 aa8.85□□□□□ -0.99
CDK5RAP3-213ENST00000579605 KIR3DS1Q14943 382 aa8.85□□□□□ -0.99
CDK5RAP3-213ENST00000579605 GFI1BQ5VTD9 330 aa8.85□□□□□ -0.99
CDK5RAP3-213ENST00000579605 C10orf113Q5VZT2 155 aa8.85□□□□□ -0.99
CDK5RAP3-213ENST00000579605 LYPD5Q6UWN5 251 aa8.85□□□□□ -0.99
CDK5RAP3-213ENST00000579605 Q6ZTI0 123 aa8.85□□□□□ -0.99
CDK5RAP3-213ENST00000579605 Q8N814 137 aa8.85□□□□□ -0.99
CDK5RAP3-213ENST00000579605 PARD6GQ9BYG4 376 aaPredicted RBP8.85□□□□□ -0.99
CDK5RAP3-213ENST00000579605 RCL1Q9Y2P8 373 aaKnown RBP8.85□□□□□ -0.99
CDK5RAP3-213ENST00000579605 PXMP4Q9Y6I8 212 aa8.85□□□□□ -0.99
CDK5RAP3-213ENST00000579605 ICOSQ9Y6W8 199 aa8.85□□□□□ -0.99
CDK5RAP3-213ENST00000579605 TRGV2A0A075B6R0 118 aa8.84□□□□□ -0.99
CDK5RAP3-213ENST00000579605 PRAC2D3DTV9 90 aa8.84□□□□□ -0.99
CDK5RAP3-213ENST00000579605 J3KRW8 73 aa8.84□□□□□ -0.99
CDK5RAP3-213ENST00000579605 EVI2AP22794 236 aa8.84□□□□□ -0.99
CDK5RAP3-213ENST00000579605 LEPP41159 167 aa8.84□□□□□ -0.99
CDK5RAP3-213ENST00000579605 TMEM37Q8WXS4 190 aa8.84□□□□□ -0.99
CDK5RAP3-213ENST00000579605 MGST2Q99735 147 aa8.84□□□□□ -0.99
CDK5RAP3-213ENST00000579605 C7orf66A4D0T2 115 aa8.83□□□□□ -1
CDK5RAP3-213ENST00000579605 SLC17A3O00476 420 aa8.83□□□□□ -1
CDK5RAP3-213ENST00000579605 PAX4O43316 350 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms