RNA–Protein interactions for RNA: ENST00000579505.5

MSI2-210, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-210ENST00000579505 MAP1LC3BQ9GZQ8 125 aa13.22□□□□□ -0.29
MSI2-210ENST00000579505 OTORQ9NRC9 128 aa13.22□□□□□ -0.29
MSI2-210ENST00000579505 TRAV8-2A0A0B4J237 113 aa13.21□□□□□ -0.29
MSI2-210ENST00000579505 A0A0J9YX75 114 aa13.21□□□□□ -0.29
MSI2-210ENST00000579505 RBMY1BA6NDE4 496 aaKnown RBP13.21□□□□□ -0.29
MSI2-210ENST00000579505 RBMY1EA6NEQ0 496 aaKnown RBP13.21□□□□□ -0.29
MSI2-210ENST00000579505 KNCNA6PVL3 124 aa13.21□□□□□ -0.29
MSI2-210ENST00000579505 H3BMM0 161 aa13.21□□□□□ -0.29
MSI2-210ENST00000579505 H3BTX0 84 aa13.21□□□□□ -0.29
MSI2-210ENST00000579505 RBMY1DP0C7P1 496 aaKnown RBP13.21□□□□□ -0.29
MSI2-210ENST00000579505 ICAM4Q14773 271 aa13.21□□□□□ -0.29
MSI2-210ENST00000579505 SFT2D1Q8WV19 159 aa13.21□□□□□ -0.29
MSI2-210ENST00000579505 SPATA25Q9BR10 227 aa13.21□□□□□ -0.29
MSI2-210ENST00000579505 K7EQM0 130 aa13.2□□□□□ -0.3
MSI2-210ENST00000579505 AMBPP02760 352 aa13.2□□□□□ -0.3
MSI2-210ENST00000579505 NKX2-5P52952 324 aaPredicted RBP13.2□□□□□ -0.3
MSI2-210ENST00000579505 ZNF124Q15973 351 aa13.2□□□□□ -0.3
MSI2-210ENST00000579505 HAGHQ16775 308 aa13.2□□□□□ -0.3
MSI2-210ENST00000579505 IGFL4Q6B9Z1 124 aa13.2□□□□□ -0.3
MSI2-210ENST00000579505 Q6ZWC4 215 aa13.2□□□□□ -0.3
MSI2-210ENST00000579505 TRPT1Q86TN4 253 aaKnown RBP13.2□□□□□ -0.3
MSI2-210ENST00000579505 OR8A1Q8NGG7 326 aa13.2□□□□□ -0.3
MSI2-210ENST00000579505 MBD3L1Q8WWY6 194 aa13.2□□□□□ -0.3
MSI2-210ENST00000579505 Q9H3A6 140 aa13.2□□□□□ -0.3
MSI2-210ENST00000579505 DNAH9Q9NYC9 4486 aa13.19□□□□□ -0.3
MSI2-210ENST00000579505 A0A1W2PRE2 83 aa13.19□□□□□ -0.3
MSI2-210ENST00000579505 SLC17A3O00476 420 aa13.19□□□□□ -0.3
MSI2-210ENST00000579505 TSPOP30536 169 aa13.19□□□□□ -0.3
MSI2-210ENST00000579505 SULT1A2P50226 295 aa13.19□□□□□ -0.3
MSI2-210ENST00000579505 HIST1H1AQ02539 215 aaPredicted RBP13.19□□□□□ -0.3
MSI2-210ENST00000579505 ZNF503Q96F45 646 aa13.19□□□□□ -0.3
MSI2-210ENST00000579505 C20orf173Q96LM9 149 aa13.19□□□□□ -0.3
MSI2-210ENST00000579505 SERTM2A0A1B0GWG4 89 aa13.18□□□□□ -0.3
MSI2-210ENST00000579505 PGPA6NDG6 321 aa13.18□□□□□ -0.3
MSI2-210ENST00000579505 NDUFB4O95168 129 aa13.18□□□□□ -0.3
MSI2-210ENST00000579505 CA1P00915 261 aaPredicted RBP13.18□□□□□ -0.3
MSI2-210ENST00000579505 BLOC1S1P78537 153 aa13.18□□□□□ -0.3
MSI2-210ENST00000579505 SUN5Q8TC36 379 aa13.18□□□□□ -0.3
MSI2-210ENST00000579505 LINC00477Q96M19 166 aa13.18□□□□□ -0.3
MSI2-210ENST00000579505 F6UZH7 168 aa13.17□□□□□ -0.3
MSI2-210ENST00000579505 CNN1P51911 297 aaKnown RBP13.17□□□□□ -0.3
MSI2-210ENST00000579505 TMEM78Q5T7P6 136 aa13.17□□□□□ -0.3
MSI2-210ENST00000579505 SBSPONQ8IVN8 264 aa13.17□□□□□ -0.3
MSI2-210ENST00000579505 EXOC3-AS1Q8N2X6 119 aa13.17□□□□□ -0.3
MSI2-210ENST00000579505 TP53TG1Q9Y2A0 90 aa13.17□□□□□ -0.3
MSI2-210ENST00000579505 ARL2-SNX15V9GYD0 113 aa13.17□□□□□ -0.3
MSI2-210ENST00000579505 RBAKDNA6NC62 111 aa13.16□□□□□ -0.3
MSI2-210ENST00000579505 ZNF705EA8MWA4 302 aaPredicted RBP13.16□□□□□ -0.3
MSI2-210ENST00000579505 IFNA1P01562 189 aa13.16□□□□□ -0.3
MSI2-210ENST00000579505 SLC25A5P05141 298 aaKnown RBP13.16□□□□□ -0.3
MSI2-210ENST00000579505 ZNF726P1Q15940 193 aa13.16□□□□□ -0.3
MSI2-210ENST00000579505 RCHY1Q96PM5 261 aa13.16□□□□□ -0.3
MSI2-210ENST00000579505 ASCL2Q99929 193 aa13.16□□□□□ -0.3
MSI2-210ENST00000579505 TCEAL7Q9BRU2 100 aa13.16□□□□□ -0.3
MSI2-210ENST00000579505 AGRNO00468 2067 aa13.16□□□□□ -0.3
MSI2-210ENST00000579505 COL7A1Q02388 2944 aa13.15□□□□□ -0.3
MSI2-210ENST00000579505 FBLL1A6NHQ2 334 aaKnown RBP13.15□□□□□ -0.3
MSI2-210ENST00000579505 ZNF705FA8MVS1 300 aaPredicted RBP13.15□□□□□ -0.3
MSI2-210ENST00000579505 IFNA7P01567 189 aa13.15□□□□□ -0.3
MSI2-210ENST00000579505 IGKV3-20P01619 116 aa13.15□□□□□ -0.3
MSI2-210ENST00000579505 HLA-DMBP28068 263 aa13.15□□□□□ -0.3
MSI2-210ENST00000579505 FHITP49789 147 aa13.15□□□□□ -0.3
MSI2-210ENST00000579505 FGF8P55075 233 aaPredicted RBP13.15□□□□□ -0.3
MSI2-210ENST00000579505 C5orf17Q8NAS9 161 aa13.15□□□□□ -0.3
MSI2-210ENST00000579505 TRAV1-1A0A0B4J248 108 aa13.14□□□□□ -0.31
MSI2-210ENST00000579505 F6UB75 175 aa13.14□□□□□ -0.31
MSI2-210ENST00000579505 TAGLN2P37802 199 aaKnown RBP13.14□□□□□ -0.31
MSI2-210ENST00000579505 LEPP41159 167 aa13.14□□□□□ -0.31
MSI2-210ENST00000579505 SUMO1P63165 101 aaKnown RBP13.14□□□□□ -0.31
MSI2-210ENST00000579505 ODF3Q96PU9 254 aa13.14□□□□□ -0.31
MSI2-210ENST00000579505 TM2D3Q9BRN9 247 aa13.14□□□□□ -0.31
MSI2-210ENST00000579505 M0R3E3 92 aa13.13□□□□□ -0.31
MSI2-210ENST00000579505 SPRY2O43597 315 aa13.13□□□□□ -0.31
MSI2-210ENST00000579505 EIF3GO75821 320 aaKnown RBP eCLIP13.13□□□□□ -0.31
MSI2-210ENST00000579505 GDF5OSQ5U4N7 250 aa13.13□□□□□ -0.31
MSI2-210ENST00000579505 ALKAL2Q6UX46 152 aa13.13□□□□□ -0.31
MSI2-210ENST00000579505 TXNDC17Q9BRA2 123 aa13.13□□□□□ -0.31
MSI2-210ENST00000579505 MANBALQ9NQG1 85 aa13.13□□□□□ -0.31
MSI2-210ENST00000579505 TGP01266 2768 aa13.12□□□□□ -0.31
MSI2-210ENST00000579505 NPIPB6E9PJ23 425 aa13.12□□□□□ -0.31
MSI2-210ENST00000579505 BOLA2-SMG1P6H3BVE0 249 aa13.12□□□□□ -0.31
MSI2-210ENST00000579505 CST9LP1Q5W188 147 aa13.12□□□□□ -0.31
MSI2-210ENST00000579505 C9orf47Q6ZRZ4 202 aa13.12□□□□□ -0.31
MSI2-210ENST00000579505 SSX7Q7RTT5 188 aa13.12□□□□□ -0.31
MSI2-210ENST00000579505 HIST1H2BAQ96A08 127 aa13.12□□□□□ -0.31
MSI2-210ENST00000579505 GOLT1BQ9Y3E0 138 aa13.12□□□□□ -0.31
MSI2-210ENST00000579505 TRBV7-9A0A0J9YWB2 115 aa13.11□□□□□ -0.31
MSI2-210ENST00000579505 A8MTW9 85 aa13.11□□□□□ -0.31
MSI2-210ENST00000579505 DIRC3C9JPN6 131 aa13.11□□□□□ -0.31
MSI2-210ENST00000579505 NMBP08949 121 aa13.11□□□□□ -0.31
MSI2-210ENST00000579505 CDKN1BP46527 198 aa13.11□□□□□ -0.31
MSI2-210ENST00000579505 DEFB1P60022 68 aa13.11□□□□□ -0.31
MSI2-210ENST00000579505 UBE2G2P60604 165 aa13.11□□□□□ -0.31
MSI2-210ENST00000579505 RNF183Q96D59 192 aa13.11□□□□□ -0.31
MSI2-210ENST00000579505 NDFIP1Q9BT67 221 aa13.11□□□□□ -0.31
MSI2-210ENST00000579505 TMEM208Q9BTX3 173 aa13.11□□□□□ -0.31
MSI2-210ENST00000579505 XCL2Q9UBD3 114 aa13.11□□□□□ -0.31
MSI2-210ENST00000579505 EPDR1Q9UM22 224 aa13.11□□□□□ -0.31
MSI2-210ENST00000579505 RPH3ALQ9UNE2 315 aa13.11□□□□□ -0.31
MSI2-210ENST00000579505 BOLA1Q9Y3E2 137 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms