RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 BORCS7-ASMTA0A0B4J1R7 106 aa4.73□□□□□ -1.65
TRAF4-213ENST00000578917 TRAV10A0A0B4J240 114 aa4.73□□□□□ -1.65
TRAF4-213ENST00000578917 ZNF705GA8MUZ8 300 aaPredicted RBP4.73□□□□□ -1.65
TRAF4-213ENST00000578917 J3KRW8 73 aa4.73□□□□□ -1.65
TRAF4-213ENST00000578917 LEPP41159 167 aa4.73□□□□□ -1.65
TRAF4-213ENST00000578917 CDKN1BP46527 198 aa4.73□□□□□ -1.65
TRAF4-213ENST00000578917 CSN1S1P47710 185 aa4.73□□□□□ -1.65
TRAF4-213ENST00000578917 RANP62826 216 aaKnown RBP4.73□□□□□ -1.65
TRAF4-213ENST00000578917 ZNF266Q14584 549 aa4.73□□□□□ -1.65
TRAF4-213ENST00000578917 ICAM4Q14773 271 aa4.73□□□□□ -1.65
TRAF4-213ENST00000578917 ACOT6Q3I5F7 207 aaPredicted RBP4.73□□□□□ -1.65
TRAF4-213ENST00000578917 FAM122CQ6P4D5 195 aa4.73□□□□□ -1.65
TRAF4-213ENST00000578917 AMTNQ6UX39 209 aa4.73□□□□□ -1.65
TRAF4-213ENST00000578917 ZNF705AQ6ZN79 300 aaPredicted RBP4.73□□□□□ -1.65
TRAF4-213ENST00000578917 ZNF767PQ75MW2 155 aa4.73□□□□□ -1.65
TRAF4-213ENST00000578917 CCDC28AQ8IWP9 274 aa4.73□□□□□ -1.65
TRAF4-213ENST00000578917 BAP18Q8IXM2 172 aa4.73□□□□□ -1.65
TRAF4-213ENST00000578917 C1orf158Q8N1D5 194 aa4.73□□□□□ -1.65
TRAF4-213ENST00000578917 RPP25LQ8N5L8 163 aaKnown RBP4.73□□□□□ -1.65
TRAF4-213ENST00000578917 HSD17B11Q8NBQ5 300 aa4.73□□□□□ -1.65
TRAF4-213ENST00000578917 OR2T35Q8NGX2 323 aa4.73□□□□□ -1.65
TRAF4-213ENST00000578917 ASB13Q8WXK3 278 aa4.73□□□□□ -1.65
TRAF4-213ENST00000578917 SAT2Q96F10 170 aaPredicted RBP4.73□□□□□ -1.65
TRAF4-213ENST00000578917 HYLS1Q96M11 299 aa4.73□□□□□ -1.65
TRAF4-213ENST00000578917 NEU1Q99519 415 aa4.73□□□□□ -1.65
TRAF4-213ENST00000578917 MRPL32Q9BYC8 188 aaKnown RBP4.73□□□□□ -1.65
TRAF4-213ENST00000578917 PRELID1Q9Y255 219 aa4.73□□□□□ -1.65
TRAF4-213ENST00000578917 TEX48A0A1B0GUV7 120 aa4.72□□□□□ -1.65
TRAF4-213ENST00000578917 PRAC2D3DTV9 90 aa4.72□□□□□ -1.65
TRAF4-213ENST00000578917 M0R3E3 92 aa4.72□□□□□ -1.65
TRAF4-213ENST00000578917 ZNF253O75346 499 aa4.72□□□□□ -1.65
TRAF4-213ENST00000578917 DEFB130BP0DP73 79 aa4.72□□□□□ -1.65
TRAF4-213ENST00000578917 DEFB130AP0DP74 79 aa4.72□□□□□ -1.65
TRAF4-213ENST00000578917 HTN3P15516 51 aa4.72□□□□□ -1.65
TRAF4-213ENST00000578917 DAD1P61803 113 aa4.72□□□□□ -1.65
TRAF4-213ENST00000578917 UBE2L3P68036 154 aaKnown RBP4.72□□□□□ -1.65
TRAF4-213ENST00000578917 PDE6HQ13956 83 aa4.72□□□□□ -1.65
TRAF4-213ENST00000578917 KHDC3LQ587J8 217 aa4.72□□□□□ -1.65
TRAF4-213ENST00000578917 TMEM78Q5T7P6 136 aa4.72□□□□□ -1.65
TRAF4-213ENST00000578917 Q6ZTC4 211 aa4.72□□□□□ -1.65
TRAF4-213ENST00000578917 TMEM256Q8N2U0 113 aa4.72□□□□□ -1.65
TRAF4-213ENST00000578917 EXOC3-AS1Q8N2X6 119 aa4.72□□□□□ -1.65
TRAF4-213ENST00000578917 OR10G4Q8NGN3 311 aa4.72□□□□□ -1.65
TRAF4-213ENST00000578917 OR10G9Q8NGN4 311 aa4.72□□□□□ -1.65
TRAF4-213ENST00000578917 OR10G7Q8NGN6 311 aa4.72□□□□□ -1.65
TRAF4-213ENST00000578917 CMTM2Q8TAZ6 248 aa4.72□□□□□ -1.65
TRAF4-213ENST00000578917 LINC00477Q96M19 166 aa4.72□□□□□ -1.65
TRAF4-213ENST00000578917 NIPSNAP3BQ9BS92 247 aa4.72□□□□□ -1.65
TRAF4-213ENST00000578917 SLC25A2Q9BXI2 301 aa4.72□□□□□ -1.65
TRAF4-213ENST00000578917 WFDC1Q9HC57 220 aa4.72□□□□□ -1.65
TRAF4-213ENST00000578917 YTHDF2Q9Y5A9 579 aaKnown RBP4.72□□□□□ -1.65
TRAF4-213ENST00000578917 AGRNO00468 2067 aa4.72□□□□□ -1.65
TRAF4-213ENST00000578917 KMT2CQ8NEZ4 4911 aaKnown RBP4.72□□□□□ -1.65
TRAF4-213ENST00000578917 TRAV12-3A0A0B4J271 114 aa4.71□□□□□ -1.66
TRAF4-213ENST00000578917 H7BYZ3 331 aa4.71□□□□□ -1.66
TRAF4-213ENST00000578917 HMGB3O15347 200 aaKnown RBP4.71□□□□□ -1.66
TRAF4-213ENST00000578917 NDUFB4O95168 129 aa4.71□□□□□ -1.66
TRAF4-213ENST00000578917 MBP02144 154 aa4.71□□□□□ -1.66
TRAF4-213ENST00000578917 PRM2P04554 102 aa4.71□□□□□ -1.66
TRAF4-213ENST00000578917 GPX1P07203 203 aa4.71□□□□□ -1.66
TRAF4-213ENST00000578917 CT45A10P0DMU9 189 aa4.71□□□□□ -1.66
TRAF4-213ENST00000578917 M6PRP20645 277 aa4.71□□□□□ -1.66
TRAF4-213ENST00000578917 RNASE4P34096 147 aaKnown RBP4.71□□□□□ -1.66
TRAF4-213ENST00000578917 TAS2R60P59551 318 aa4.71□□□□□ -1.66
TRAF4-213ENST00000578917 ERCC8Q13216 396 aa4.71□□□□□ -1.66
TRAF4-213ENST00000578917 OXA1LQ15070 435 aa4.71□□□□□ -1.66
TRAF4-213ENST00000578917 C12orf74Q32Q52 190 aa4.71□□□□□ -1.66
TRAF4-213ENST00000578917 Q5BKY6 102 aa4.71□□□□□ -1.66
TRAF4-213ENST00000578917 FAM74A1Q5RGS3 127 aa4.71□□□□□ -1.66
TRAF4-213ENST00000578917 FAM222AQ5U5X8 452 aa4.71□□□□□ -1.66
TRAF4-213ENST00000578917 IQCF2Q8IXL9 164 aa4.71□□□□□ -1.66
TRAF4-213ENST00000578917 MRPL53Q96EL3 112 aaKnown RBP4.71□□□□□ -1.66
TRAF4-213ENST00000578917 FAM167A-AS1Q96KT0 104 aa4.71□□□□□ -1.66
TRAF4-213ENST00000578917 AQP10Q96PS8 301 aa4.71□□□□□ -1.66
TRAF4-213ENST00000578917 PARD6GQ9BYG4 376 aaPredicted RBP4.71□□□□□ -1.66
TRAF4-213ENST00000578917 PLA2G2EQ9NZK7 142 aa4.71□□□□□ -1.66
TRAF4-213ENST00000578917 CELA1Q9UNI1 258 aa4.71□□□□□ -1.66
TRAF4-213ENST00000578917 IGKV2-40A0A087WW87 121 aaPredicted RBP4.7□□□□□ -1.66
TRAF4-213ENST00000578917 A8MTW9 85 aa4.7□□□□□ -1.66
TRAF4-213ENST00000578917 NPIPB6E9PJ23 425 aa4.7□□□□□ -1.66
TRAF4-213ENST00000578917 ARPC5O15511 151 aa4.7□□□□□ -1.66
TRAF4-213ENST00000578917 CRXO43186 299 aaPredicted RBP4.7□□□□□ -1.66
TRAF4-213ENST00000578917 EIF3GO75821 320 aaKnown RBP eCLIP4.7□□□□□ -1.66
TRAF4-213ENST00000578917 IGKV2D-40P01614 121 aaPredicted RBP4.7□□□□□ -1.66
TRAF4-213ENST00000578917 AZU1P20160 251 aa4.7□□□□□ -1.66
TRAF4-213ENST00000578917 TCTAP57738 103 aa4.7□□□□□ -1.66
TRAF4-213ENST00000578917 RAB2AP61019 212 aa4.7□□□□□ -1.66
TRAF4-213ENST00000578917 SERF2P84101 59 aa4.7□□□□□ -1.66
TRAF4-213ENST00000578917 PQLC2Q6ZP29 291 aa4.7□□□□□ -1.66
TRAF4-213ENST00000578917 LYPD1Q8N2G4 141 aa4.7□□□□□ -1.66
TRAF4-213ENST00000578917 OR2G3Q8NGZ4 309 aa4.7□□□□□ -1.66
TRAF4-213ENST00000578917 RXFP4Q8TDU9 374 aa4.7□□□□□ -1.66
TRAF4-213ENST00000578917 LINC00476Q8WZB0 136 aa4.7□□□□□ -1.66
TRAF4-213ENST00000578917 FXYD5Q96DB9 178 aa4.7□□□□□ -1.66
TRAF4-213ENST00000578917 GNPNAT1Q96EK6 184 aaPredicted RBP4.7□□□□□ -1.66
TRAF4-213ENST00000578917 NDUFAF3Q9BU61 184 aa4.7□□□□□ -1.66
TRAF4-213ENST00000578917 ACTR3CQ9C0K3 210 aaPredicted RBP4.7□□□□□ -1.66
TRAF4-213ENST00000578917 AGPAT4-IT1Q9H0P7 198 aa4.7□□□□□ -1.66
TRAF4-213ENST00000578917 DKK2Q9UBU2 259 aa4.7□□□□□ -1.66
TRAF4-213ENST00000578917 RPH3ALQ9UNE2 315 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms