RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 C16orf74Q96GX8 76 aa11.2□□□□□ -0.62
CRLF3-203ENST00000578692 IGLV2-18A0A075B6J9 118 aa11.19□□□□□ -0.62
CRLF3-203ENST00000578692 CBY3A6NI87 242 aa11.19□□□□□ -0.62
CRLF3-203ENST00000578692 KIR3DS1Q14943 382 aa11.19□□□□□ -0.62
CRLF3-203ENST00000578692 ATP6V1FQ16864 119 aa11.19□□□□□ -0.62
CRLF3-203ENST00000578692 ZNF493Q6ZR52 646 aa11.19□□□□□ -0.62
CRLF3-203ENST00000578692 STX12Q86Y82 276 aa11.19□□□□□ -0.62
CRLF3-203ENST00000578692 CHAC2Q8WUX2 184 aa11.19□□□□□ -0.62
CRLF3-203ENST00000578692 C20orf144Q9BQM9 153 aa11.19□□□□□ -0.62
CRLF3-203ENST00000578692 SLC39A9Q9NUM3 307 aa11.19□□□□□ -0.62
CRLF3-203ENST00000578692 TIMM8BQ9Y5J9 83 aaPredicted RBP11.19□□□□□ -0.62
CRLF3-203ENST00000578692 UBE2L5PA0A1B0GUS4 154 aa11.18□□□□□ -0.62
CRLF3-203ENST00000578692 PRSS29PA6NIE9 313 aa11.18□□□□□ -0.62
CRLF3-203ENST00000578692 F5H768 121 aa11.18□□□□□ -0.62
CRLF3-203ENST00000578692 H7BYZ3 331 aa11.18□□□□□ -0.62
CRLF3-203ENST00000578692 RTL8CO15255 209 aa11.18□□□□□ -0.62
CRLF3-203ENST00000578692 ATP5G1P05496 136 aa11.18□□□□□ -0.62
CRLF3-203ENST00000578692 ATP5G3P48201 142 aa11.18□□□□□ -0.62
CRLF3-203ENST00000578692 ASAH1Q13510 395 aa11.18□□□□□ -0.62
CRLF3-203ENST00000578692 PARD6GQ9BYG4 376 aaPredicted RBP11.18□□□□□ -0.62
CRLF3-203ENST00000578692 ZNF586Q9NXT0 402 aa11.18□□□□□ -0.62
CRLF3-203ENST00000578692 FGF7P21781 194 aa11.17□□□□□ -0.62
CRLF3-203ENST00000578692 Q6ZR54 194 aa11.17□□□□□ -0.62
CRLF3-203ENST00000578692 TMEM263Q8WUH6 116 aaKnown RBP11.17□□□□□ -0.62
CRLF3-203ENST00000578692 GPN1Q9HCN4 374 aaPredicted RBP11.17□□□□□ -0.62
CRLF3-203ENST00000578692 HECTD4Q9Y4D8 3996 aa11.17□□□□□ -0.62
CRLF3-203ENST00000578692 A0A1B0GVY2 172 aa11.16□□□□□ -0.62
CRLF3-203ENST00000578692 CCDC28AQ8IWP9 274 aa11.16□□□□□ -0.62
CRLF3-203ENST00000578692 RNASE8Q8TDE3 154 aaKnown RBP11.16□□□□□ -0.62
CRLF3-203ENST00000578692 NOP10Q9NPE3 64 aaKnown RBP11.16□□□□□ -0.62
CRLF3-203ENST00000578692 ZNF253O75346 499 aa11.16□□□□□ -0.62
CRLF3-203ENST00000578692 MPDU1O75352 247 aa11.16□□□□□ -0.62
CRLF3-203ENST00000578692 RLN2P04090 185 aa11.16□□□□□ -0.62
CRLF3-203ENST00000578692 CT45A10P0DMU9 189 aa11.16□□□□□ -0.62
CRLF3-203ENST00000578692 NHLH2Q02577 135 aa11.16□□□□□ -0.62
CRLF3-203ENST00000578692 GFI1BQ5VTD9 330 aa11.16□□□□□ -0.62
CRLF3-203ENST00000578692 ENKURQ8TC29 256 aa11.16□□□□□ -0.62
CRLF3-203ENST00000578692 ATG101Q9BSB4 218 aa11.16□□□□□ -0.62
CRLF3-203ENST00000578692 TMEM14CQ9P0S9 112 aa11.16□□□□□ -0.62
CRLF3-203ENST00000578692 DNAH2Q9P225 4427 aa11.15□□□□□ -0.62
CRLF3-203ENST00000578692 TRBV19A0A075B6N1 114 aa11.15□□□□□ -0.63
CRLF3-203ENST00000578692 NPIPB6E9PJ23 425 aa11.15□□□□□ -0.63
CRLF3-203ENST00000578692 J3KRW8 73 aa11.15□□□□□ -0.63
CRLF3-203ENST00000578692 SIX6O95475 246 aa11.15□□□□□ -0.63
CRLF3-203ENST00000578692 NUDT3O95989 172 aa11.15□□□□□ -0.63
CRLF3-203ENST00000578692 HIST1H1EP10412 219 aaKnown RBP11.15□□□□□ -0.63
CRLF3-203ENST00000578692 LEPP41159 167 aa11.15□□□□□ -0.63
CRLF3-203ENST00000578692 FAM3BP58499 235 aaPredicted RBP11.15□□□□□ -0.63
CRLF3-203ENST00000578692 ODF3Q96PU9 254 aa11.15□□□□□ -0.63
CRLF3-203ENST00000578692 NACAE9PAV3 2078 aa11.14□□□□□ -0.63
CRLF3-203ENST00000578692 FAT2Q9NYQ8 4349 aa11.14□□□□□ -0.63
CRLF3-203ENST00000578692 TRAV12-3A0A0B4J271 114 aa11.14□□□□□ -0.63
CRLF3-203ENST00000578692 UPK1BO75841 260 aa11.14□□□□□ -0.63
CRLF3-203ENST00000578692 MRPL53Q96EL3 112 aaKnown RBP11.14□□□□□ -0.63
CRLF3-203ENST00000578692 NPCDR1Q9BY65 106 aa11.14□□□□□ -0.63
CRLF3-203ENST00000578692 SLC25A31Q9H0C2 315 aa11.14□□□□□ -0.63
CRLF3-203ENST00000578692 TIMM9Q9Y5J7 89 aa11.14□□□□□ -0.63
CRLF3-203ENST00000578692 DNAH17Q9UFH2 4485 aa11.13□□□□□ -0.63
CRLF3-203ENST00000578692 E5RGE8 158 aa11.13□□□□□ -0.63
CRLF3-203ENST00000578692 M0R3E3 92 aa11.13□□□□□ -0.63
CRLF3-203ENST00000578692 SOHLH1Q5JUK2 328 aa11.13□□□□□ -0.63
CRLF3-203ENST00000578692 OR5C1Q8NGR4 320 aa11.13□□□□□ -0.63
CRLF3-203ENST00000578692 NMES1Q9C002 83 aa11.13□□□□□ -0.63
CRLF3-203ENST00000578692 PRELID1Q9Y255 219 aa11.13□□□□□ -0.63
CRLF3-203ENST00000578692 SNURFLB1AK76 121 aa11.12□□□□□ -0.63
CRLF3-203ENST00000578692 NDUFB4O95168 129 aa11.12□□□□□ -0.63
CRLF3-203ENST00000578692 PYYP10082 97 aa11.12□□□□□ -0.63
CRLF3-203ENST00000578692 CYCSP99999 105 aaKnown RBP11.12□□□□□ -0.63
CRLF3-203ENST00000578692 IFITM3Q01628 133 aa11.12□□□□□ -0.63
CRLF3-203ENST00000578692 ERCC8Q13216 396 aa11.12□□□□□ -0.63
CRLF3-203ENST00000578692 PDE6HQ13956 83 aa11.12□□□□□ -0.63
CRLF3-203ENST00000578692 LRRC37A5PQ49AS3 106 aa11.12□□□□□ -0.63
CRLF3-203ENST00000578692 GCSAMLQ5JQS6 135 aa11.12□□□□□ -0.63
CRLF3-203ENST00000578692 C1orf134Q5TEV5 83 aa11.12□□□□□ -0.63
CRLF3-203ENST00000578692 THAP6Q8TBB0 222 aa11.12□□□□□ -0.63
CRLF3-203ENST00000578692 BLNKQ8WV28 456 aa11.12□□□□□ -0.63
CRLF3-203ENST00000578692 LINC00477Q96M19 166 aa11.12□□□□□ -0.63
CRLF3-203ENST00000578692 PYGO2Q9BRQ0 406 aa11.12□□□□□ -0.63
CRLF3-203ENST00000578692 OR5AC2Q9NZP5 309 aa11.12□□□□□ -0.63
CRLF3-203ENST00000578692 A6NHS1 94 aa11.11□□□□□ -0.63
CRLF3-203ENST00000578692 INMT-MINDY4F8WBC2 141 aa11.11□□□□□ -0.63
CRLF3-203ENST00000578692 PRAF2O60831 178 aa11.11□□□□□ -0.63
CRLF3-203ENST00000578692 CCL18P55774 89 aa11.11□□□□□ -0.63
CRLF3-203ENST00000578692 OR5I1Q13606 314 aa11.11□□□□□ -0.63
CRLF3-203ENST00000578692 LINC00612Q8N6U2 182 aa11.11□□□□□ -0.63
CRLF3-203ENST00000578692 RNF141Q8WVD5 230 aa11.11□□□□□ -0.63
CRLF3-203ENST00000578692 H0YIZ8 118 aa11.1□□□□□ -0.63
CRLF3-203ENST00000578692 SLC25A5P05141 298 aaKnown RBP11.1□□□□□ -0.63
CRLF3-203ENST00000578692 EXOC3-AS1Q8N2X6 119 aa11.1□□□□□ -0.63
CRLF3-203ENST00000578692 SLC25A2Q9BXI2 301 aa11.1□□□□□ -0.63
CRLF3-203ENST00000578692 AGPAT4-IT1Q9H0P7 198 aa11.1□□□□□ -0.63
CRLF3-203ENST00000578692 AAMDCQ9H7C9 122 aa11.1□□□□□ -0.63
CRLF3-203ENST00000578692 HERC2O95714 4834 aa11.1□□□□□ -0.63
CRLF3-203ENST00000578692 GAGE12BA1L429 117 aa11.09□□□□□ -0.63
CRLF3-203ENST00000578692 GAGE7O76087 117 aa11.09□□□□□ -0.63
CRLF3-203ENST00000578692 GAGE12FP0CL80 117 aa11.09□□□□□ -0.63
CRLF3-203ENST00000578692 GAGE12GP0CL81 117 aa11.09□□□□□ -0.63
CRLF3-203ENST00000578692 GAGE12IP0CL82 117 aa11.09□□□□□ -0.63
CRLF3-203ENST00000578692 CLINT1Q14677 625 aa11.09□□□□□ -0.63
CRLF3-203ENST00000578692 ICAM4Q14773 271 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms