RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 SNRPCP09234 159 aaKnown RBP8.35□□□□□ -1.07
TRAPPC8-204ENST00000578252 ZNF688P0C7X2 276 aa8.35□□□□□ -1.07
TRAPPC8-204ENST00000578252 CD81P60033 236 aa8.35□□□□□ -1.07
TRAPPC8-204ENST00000578252 IFITM2Q01629 132 aa8.35□□□□□ -1.07
TRAPPC8-204ENST00000578252 PSG3Q16557 428 aa8.35□□□□□ -1.07
TRAPPC8-204ENST00000578252 LYPD6BQ8NI32 183 aa8.35□□□□□ -1.07
TRAPPC8-204ENST00000578252 KRTAP9-9Q9BYP9 154 aa8.35□□□□□ -1.07
TRAPPC8-204ENST00000578252 KRTAP9-4Q9BYQ2 154 aa8.35□□□□□ -1.07
TRAPPC8-204ENST00000578252 Q9H3A6 140 aa8.35□□□□□ -1.07
TRAPPC8-204ENST00000578252 TMPRSS5Q9H3S3 457 aa8.35□□□□□ -1.07
TRAPPC8-204ENST00000578252 MAP6D1Q9H9H5 199 aa8.35□□□□□ -1.07
TRAPPC8-204ENST00000578252 OTORQ9NRC9 128 aa8.35□□□□□ -1.07
TRAPPC8-204ENST00000578252 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC8-204ENST00000578252 TRAV8-2A0A0B4J237 113 aa8.34□□□□□ -1.07
TRAPPC8-204ENST00000578252 A0A1B0GV50 99 aa8.34□□□□□ -1.07
TRAPPC8-204ENST00000578252 NMBP08949 121 aa8.34□□□□□ -1.07
TRAPPC8-204ENST00000578252 CSN1S1P47710 185 aa8.34□□□□□ -1.07
TRAPPC8-204ENST00000578252 RANP62826 216 aaKnown RBP8.34□□□□□ -1.07
TRAPPC8-204ENST00000578252 ODF3L2Q3SX64 289 aa8.34□□□□□ -1.07
TRAPPC8-204ENST00000578252 PSMG4Q5JS54 123 aa8.34□□□□□ -1.07
TRAPPC8-204ENST00000578252 ZNF738Q8NE65 137 aa8.34□□□□□ -1.07
TRAPPC8-204ENST00000578252 CMTM2Q8TAZ6 248 aa8.34□□□□□ -1.07
TRAPPC8-204ENST00000578252 RXFP4Q8TDU9 374 aa8.34□□□□□ -1.07
TRAPPC8-204ENST00000578252 LINC00052Q96N35 136 aa8.34□□□□□ -1.07
TRAPPC8-204ENST00000578252 TXNDC17Q9BRA2 123 aa8.34□□□□□ -1.07
TRAPPC8-204ENST00000578252 TCEAL7Q9BRU2 100 aa8.34□□□□□ -1.07
TRAPPC8-204ENST00000578252 DNHD1Q96M86 4753 aa8.34□□□□□ -1.07
TRAPPC8-204ENST00000578252 FAM74A7A6NL05 159 aa8.33□□□□□ -1.08
TRAPPC8-204ENST00000578252 RGS13O14921 159 aa8.33□□□□□ -1.08
TRAPPC8-204ENST00000578252 CD7P09564 240 aa8.33□□□□□ -1.08
TRAPPC8-204ENST00000578252 DEFB131AP59861 70 aa8.33□□□□□ -1.08
TRAPPC8-204ENST00000578252 KRTAP10-11P60412 298 aa8.33□□□□□ -1.08
TRAPPC8-204ENST00000578252 ICAM4Q14773 271 aa8.33□□□□□ -1.08
TRAPPC8-204ENST00000578252 CLLU1Q5K131 121 aa8.33□□□□□ -1.08
TRAPPC8-204ENST00000578252 FAM24BQ8N5W8 94 aa8.33□□□□□ -1.08
TRAPPC8-204ENST00000578252 C5orf17Q8NAS9 161 aa8.33□□□□□ -1.08
TRAPPC8-204ENST00000578252 GNG13Q9P2W3 67 aa8.33□□□□□ -1.08
TRAPPC8-204ENST00000578252 CMYA5Q8N3K9 4069 aa8.33□□□□□ -1.08
TRAPPC8-204ENST00000578252 NOTCH1P46531 2555 aa8.33□□□□□ -1.08
TRAPPC8-204ENST00000578252 SERTM2A0A1B0GWG4 89 aa8.32□□□□□ -1.08
TRAPPC8-204ENST00000578252 PGPA6NDG6 321 aa8.32□□□□□ -1.08
TRAPPC8-204ENST00000578252 PAGE4O60829 102 aa8.32□□□□□ -1.08
TRAPPC8-204ENST00000578252 UBE2G2P60604 165 aa8.32□□□□□ -1.08
TRAPPC8-204ENST00000578252 CCL20P78556 96 aa8.32□□□□□ -1.08
TRAPPC8-204ENST00000578252 CST9LP1Q5W188 147 aa8.32□□□□□ -1.08
TRAPPC8-204ENST00000578252 EBLN2Q6P2I7 272 aa8.32□□□□□ -1.08
TRAPPC8-204ENST00000578252 FOXI2Q6ZQN5 318 aa8.32□□□□□ -1.08
TRAPPC8-204ENST00000578252 EXOC3-AS1Q8N2X6 119 aa8.32□□□□□ -1.08
TRAPPC8-204ENST00000578252 RNF182Q8N6D2 247 aa8.32□□□□□ -1.08
TRAPPC8-204ENST00000578252 RPUSD4Q96CM3 377 aaKnown RBP8.32□□□□□ -1.08
TRAPPC8-204ENST00000578252 PRR25Q96S07 402 aa8.32□□□□□ -1.08
TRAPPC8-204ENST00000578252 YTHDF2Q9Y5A9 579 aaKnown RBP8.32□□□□□ -1.08
TRAPPC8-204ENST00000578252 GGTLC3B5MD39 225 aa8.31□□□□□ -1.08
TRAPPC8-204ENST00000578252 F6UZH7 168 aa8.31□□□□□ -1.08
TRAPPC8-204ENST00000578252 DUSP14O95147 198 aaKnown RBP8.31□□□□□ -1.08
TRAPPC8-204ENST00000578252 SLC25A5P05141 298 aaKnown RBP8.31□□□□□ -1.08
TRAPPC8-204ENST00000578252 BCL2P10415 239 aa8.31□□□□□ -1.08
TRAPPC8-204ENST00000578252 HLA-DMBP28068 263 aa8.31□□□□□ -1.08
TRAPPC8-204ENST00000578252 SUMO1P63165 101 aaKnown RBP8.31□□□□□ -1.08
TRAPPC8-204ENST00000578252 Q8N1Y9 231 aa8.31□□□□□ -1.08
TRAPPC8-204ENST00000578252 OR10J6PQ8NGY7 276 aa8.31□□□□□ -1.08
TRAPPC8-204ENST00000578252 C20orf173Q96LM9 149 aa8.31□□□□□ -1.08
TRAPPC8-204ENST00000578252 SAV1Q9H4B6 383 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC8-204ENST00000578252 C19orf73Q9NVV2 129 aa8.31□□□□□ -1.08
TRAPPC8-204ENST00000578252 VAX2Q9UIW0 290 aa8.31□□□□□ -1.08
TRAPPC8-204ENST00000578252 A0A0J9YX75 114 aa8.3□□□□□ -1.08
TRAPPC8-204ENST00000578252 RBAKDNA6NC62 111 aa8.3□□□□□ -1.08
TRAPPC8-204ENST00000578252 FBLL1A6NHQ2 334 aaKnown RBP8.3□□□□□ -1.08
TRAPPC8-204ENST00000578252 C11orf94C9JXX5 98 aa8.3□□□□□ -1.08
TRAPPC8-204ENST00000578252 K7EQM0 130 aa8.3□□□□□ -1.08
TRAPPC8-204ENST00000578252 M0R3E3 92 aa8.3□□□□□ -1.08
TRAPPC8-204ENST00000578252 NDUFS6O75380 124 aaKnown RBP8.3□□□□□ -1.08
TRAPPC8-204ENST00000578252 HLA-DRB4P13762 266 aa8.3□□□□□ -1.08
TRAPPC8-204ENST00000578252 MEF2BQ02080 365 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC8-204ENST00000578252 IGFL4Q6B9Z1 124 aa8.3□□□□□ -1.08
TRAPPC8-204ENST00000578252 OR8A1Q8NGG7 326 aa8.3□□□□□ -1.08
TRAPPC8-204ENST00000578252 HIST1H2BAQ96A08 127 aa8.3□□□□□ -1.08
TRAPPC8-204ENST00000578252 EPDR1Q9UM22 224 aa8.3□□□□□ -1.08
TRAPPC8-204ENST00000578252 HLA-DRB4X5D2U9 266 aa8.3□□□□□ -1.08
TRAPPC8-204ENST00000578252 LOC102723971A0A1B0GUV8 181 aa8.29□□□□□ -1.08
TRAPPC8-204ENST00000578252 RBFOX3A6NFN3 312 aa8.29□□□□□ -1.08
TRAPPC8-204ENST00000578252 ZNF705FA8MVS1 300 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC8-204ENST00000578252 H3BS24 57 aa8.29□□□□□ -1.08
TRAPPC8-204ENST00000578252 PDE6DO43924 150 aa8.29□□□□□ -1.08
TRAPPC8-204ENST00000578252 ATP5G3P48201 142 aa8.29□□□□□ -1.08
TRAPPC8-204ENST00000578252 HAGHQ16775 308 aa8.29□□□□□ -1.08
TRAPPC8-204ENST00000578252 ZNF506Q5JVG8 444 aa8.29□□□□□ -1.08
TRAPPC8-204ENST00000578252 APRG1Q8IVJ8 170 aa8.29□□□□□ -1.08
TRAPPC8-204ENST00000578252 STHQ8IWL8 128 aa8.29□□□□□ -1.08
TRAPPC8-204ENST00000578252 CCDC28AQ8IWP9 274 aa8.29□□□□□ -1.08
TRAPPC8-204ENST00000578252 PCNPQ8WW12 178 aaKnown RBP8.29□□□□□ -1.08
TRAPPC8-204ENST00000578252 CLUHP3Q96NS8 147 aa8.29□□□□□ -1.08
TRAPPC8-204ENST00000578252 ATG101Q9BSB4 218 aa8.29□□□□□ -1.08
TRAPPC8-204ENST00000578252 A8MZ25 164 aa8.28□□□□□ -1.08
TRAPPC8-204ENST00000578252 DIRC3C9JPN6 131 aa8.28□□□□□ -1.08
TRAPPC8-204ENST00000578252 NPIPB6E9PJ23 425 aa8.28□□□□□ -1.08
TRAPPC8-204ENST00000578252 PEX7O00628 323 aa8.28□□□□□ -1.08
TRAPPC8-204ENST00000578252 TCRAP04437 139 aa8.28□□□□□ -1.08
TRAPPC8-204ENST00000578252 HIST1H1AQ02539 215 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC8-204ENST00000578252 ACTL10Q5JWF8 245 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms